NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104685

Metagenome / Metatranscriptome Family F104685

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104685
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 110 residues
Representative Sequence MKRCILTSFVLCFGILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTIVVTKGATQRQVIYNSDTKWMHGTHASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRESK
Number of Associated Samples 79
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.00 %
% of genes near scaffold ends (potentially truncated) 26.00 %
% of genes from short scaffolds (< 2000 bps) 85.00 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(28.000 % of family members)
Environment Ontology (ENVO) Unclassified
(35.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 14.89%    β-sheet: 28.37%    Coil/Unstructured: 56.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF07676PD40 7.00
PF16375DUF4986 3.00
PF01740STAS 3.00
PF00069Pkinase 3.00
PF13424TPR_12 2.00
PF06723MreB_Mbl 2.00
PF07638Sigma70_ECF 2.00
PF12704MacB_PCD 2.00
PF00106adh_short 1.00
PF07944Glyco_hydro_127 1.00
PF13631Cytochrom_B_N_2 1.00
PF03965Penicillinase_R 1.00
PF13620CarboxypepD_reg 1.00
PF00731AIRC 1.00
PF13847Methyltransf_31 1.00
PF00005ABC_tran 1.00
PF13489Methyltransf_23 1.00
PF05163DinB 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 12.00
COG1077Cell shape-determining ATPase MreB, actin-like superfamilyCell cycle control, cell division, chromosome partitioning [D] 2.00
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 2.00
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.00
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 1.00
COG3533Beta-L-arabinofuranosidase, GH127 familyCarbohydrate transport and metabolism [G] 1.00
COG3682Transcriptional regulator, CopY/TcrY familyTranscription [K] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.00 %
UnclassifiedrootN/A1.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004104|Ga0058891_1570054All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300004114|Ga0062593_102197720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300004139|Ga0058897_10027724All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300004156|Ga0062589_101966735All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300004480|Ga0062592_100977574All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium771Open in IMG/M
3300005439|Ga0070711_100535231All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium970Open in IMG/M
3300005445|Ga0070708_100096558All Organisms → cellular organisms → Bacteria2700Open in IMG/M
3300005445|Ga0070708_100426124All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1251Open in IMG/M
3300005445|Ga0070708_100885874All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium838Open in IMG/M
3300005446|Ga0066686_10688933All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium691Open in IMG/M
3300005467|Ga0070706_101603299All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300005468|Ga0070707_100173425All Organisms → cellular organisms → Bacteria2102Open in IMG/M
3300005471|Ga0070698_102068982All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300005518|Ga0070699_100274670All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1509Open in IMG/M
3300005536|Ga0070697_101844580All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300005541|Ga0070733_10032717All Organisms → cellular organisms → Bacteria → Acidobacteria3241Open in IMG/M
3300005542|Ga0070732_10046655All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2499Open in IMG/M
3300005542|Ga0070732_10175969All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300006028|Ga0070717_12167109All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300006052|Ga0075029_100333078All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium975Open in IMG/M
3300006102|Ga0075015_100132294All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1283Open in IMG/M
3300006162|Ga0075030_100790911All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300006806|Ga0079220_11691886All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300006871|Ga0075434_100234570All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1855Open in IMG/M
3300006893|Ga0073928_10426101All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium965Open in IMG/M
3300006903|Ga0075426_10003863All Organisms → cellular organisms → Bacteria → Acidobacteria10685Open in IMG/M
3300006903|Ga0075426_11550021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300007076|Ga0075435_100263596All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1468Open in IMG/M
3300007265|Ga0099794_10417421All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M
3300009038|Ga0099829_10363191All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1193Open in IMG/M
3300009038|Ga0099829_10989055All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300009088|Ga0099830_11713626All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300009089|Ga0099828_10234545All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1642Open in IMG/M
3300009098|Ga0105245_11756588Not Available673Open in IMG/M
3300009137|Ga0066709_103717012All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300010373|Ga0134128_13003668All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300010379|Ga0136449_100449899All Organisms → cellular organisms → Bacteria2260Open in IMG/M
3300011269|Ga0137392_10977354All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium696Open in IMG/M
3300011269|Ga0137392_11500596All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300011270|Ga0137391_10445106All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1102Open in IMG/M
3300011270|Ga0137391_11103631All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300012189|Ga0137388_10489452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1142Open in IMG/M
3300012189|Ga0137388_10735480All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium916Open in IMG/M
3300012202|Ga0137363_10346852All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1228Open in IMG/M
3300012203|Ga0137399_10173668All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1736Open in IMG/M
3300012205|Ga0137362_10128733All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2152Open in IMG/M
3300012205|Ga0137362_10331930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1317Open in IMG/M
3300012205|Ga0137362_10333020All Organisms → cellular organisms → Bacteria → Acidobacteria1314Open in IMG/M
3300012206|Ga0137380_10810943All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium807Open in IMG/M
3300012210|Ga0137378_10511707All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1108Open in IMG/M
3300012210|Ga0137378_10888377All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium804Open in IMG/M
3300012349|Ga0137387_11113763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300012363|Ga0137390_10338522All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1486Open in IMG/M
3300012685|Ga0137397_10909238All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300012918|Ga0137396_10490527All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium910Open in IMG/M
3300012925|Ga0137419_10021435All Organisms → cellular organisms → Bacteria → Acidobacteria3784Open in IMG/M
3300012925|Ga0137419_10823103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium761Open in IMG/M
3300015264|Ga0137403_10693942All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium878Open in IMG/M
3300017823|Ga0187818_10018888All Organisms → cellular organisms → Bacteria → Acidobacteria2949Open in IMG/M
3300017959|Ga0187779_10283928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1055Open in IMG/M
3300017973|Ga0187780_10130144All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300019273|Ga0187794_1735895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300020004|Ga0193755_1068741All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1146Open in IMG/M
3300020579|Ga0210407_10025058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4434Open in IMG/M
3300020581|Ga0210399_10102859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2338Open in IMG/M
3300021088|Ga0210404_10275903All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium920Open in IMG/M
3300021168|Ga0210406_11271094All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300021479|Ga0210410_11714052All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300022527|Ga0242664_1155802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300022531|Ga0242660_1257782All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300022532|Ga0242655_10298117All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300022722|Ga0242657_1247760All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300022724|Ga0242665_10295897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300022726|Ga0242654_10020330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1618Open in IMG/M
3300025939|Ga0207665_10299505All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1202Open in IMG/M
3300027842|Ga0209580_10085109All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1516Open in IMG/M
3300027842|Ga0209580_10251645All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium879Open in IMG/M
3300027846|Ga0209180_10441739All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium734Open in IMG/M
3300027862|Ga0209701_10134173All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1523Open in IMG/M
3300027867|Ga0209167_10017527All Organisms → cellular organisms → Bacteria → Acidobacteria3392Open in IMG/M
3300029636|Ga0222749_10610736All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300031057|Ga0170834_100978327All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium690Open in IMG/M
3300031421|Ga0308194_10159604All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M
3300031421|Ga0308194_10297453All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300031720|Ga0307469_10176402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1637Open in IMG/M
3300031720|Ga0307469_10208609All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1533Open in IMG/M
3300031754|Ga0307475_10738437All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium783Open in IMG/M
3300031820|Ga0307473_10299179All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1012Open in IMG/M
3300031820|Ga0307473_10940898All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300031820|Ga0307473_11031822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300031912|Ga0306921_12670902All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300031962|Ga0307479_10222110All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1863Open in IMG/M
3300031962|Ga0307479_11244911All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium706Open in IMG/M
3300032160|Ga0311301_10433439All Organisms → cellular organisms → Bacteria → Acidobacteria1991Open in IMG/M
3300032782|Ga0335082_10064941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3716Open in IMG/M
3300032783|Ga0335079_10050053All Organisms → cellular organisms → Bacteria → Acidobacteria4785Open in IMG/M
3300032783|Ga0335079_10068838All Organisms → cellular organisms → Bacteria4033Open in IMG/M
3300032783|Ga0335079_10443924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1392Open in IMG/M
3300032783|Ga0335079_10683004All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1074Open in IMG/M
3300032828|Ga0335080_11098472All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium805Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil8.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil6.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.00%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300019273Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058891_157005413300004104Forest SoilMMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTVTKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCKGKFDGVKLVADACRFRASK*
Ga0062593_10219772013300004114SoilMRHRFLRQSALCLGVVVYMAFSLAEAADKKAKEGQITGRVQMIDKDKSTIMVAKGNTPRQVIYNSDTKWTYGTQASNKPSSLDDLKEKWYINCTGTFDGVKLVASACRFRESK*
Ga0058897_1002772413300004139Forest SoilMMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTITKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCKGKFDGVKLVADACRFRASK*
Ga0062589_10196673513300004156SoilMRHRFLIQSALCLGVVVYMAFSLAEAANKKAKEGQITGRVQMIDKDKSTIMVAKGNTPRQVIYNSDTKWTYGTQASNKPSSLADLKEKWYINCMGTFDGVKLVASACRFRESK*
Ga0062592_10097757413300004480SoilRFLRQSALCLGVIVSMAFSLTEAADKKAKEGQITGRVQMIDKDKSTIMVAKGNTPRQVIYNSDTKWTYGTQASNKPSSLADLKEKWYINCMGTFDGVKLVASACRFRESK*
Ga0070711_10053523123300005439Corn, Switchgrass And Miscanthus RhizosphereMTRNDLTSFTVCLGVVIGMAIGPARAADKKTIEGQVTGRVHMIEKDKSTIVVMKGTTQRRVTYNSDTKWMYGTQTNNKPSSLDDLKENWYVNCKGTFDGVKLAASACRFRESK*
Ga0070708_10009655833300005445Corn, Switchgrass And Miscanthus RhizosphereILTSFVLCLGLACVAINPAGAAEKKAKEGQLNGRVQMIEKDKSTIMVMKANTSRQVIYNSDTKWMRGTQASNKPSSFDELKENWYINCKGTFDGVRLVASACRFRESK*
Ga0070708_10042612423300005445Corn, Switchgrass And Miscanthus RhizosphereMRCSISKSIALCLGILVCVAAGAADKKAKEGQITGRVQMIDKDKSTITVAKGTTQRQVIYNSDTKWMHGTQASNKPSSLDELKENWYINCEGKFDGVKLVANACRFRASK*
Ga0070708_10088587413300005445Corn, Switchgrass And Miscanthus RhizosphereMTYGKLTSFVLCIGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLMVMKGTTQREVIYNSDTKWMRGTQGSNKPASLDDLKENWYINCEGTFDGVKLVASACRFRTSK*
Ga0066686_1068893313300005446SoilWLGILACVTFNLVDAADKKAKEGQITGRVQMIDKDKSTIMVEKGNSPRQVIYNGDTRWAYGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRESK*
Ga0070706_10160329913300005467Corn, Switchgrass And Miscanthus RhizosphereRPPVVIGMAIGPGRAADKKTIEGQVTGRVHMIEKEKSTIVVMKGTTQRRVTYNSDTKWMYGTQTNNKPSSLDDLKENWYVNCKGTFDGVKLAASACRFRESK*
Ga0070707_10017342513300005468Corn, Switchgrass And Miscanthus RhizosphereMKRCILTSFVLCFGILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTIVVTKGATPRQVIYNSDTKWMHGTQASNKPSSLDELKENWYINCEGKFDGVKLVANACRFRASK*
Ga0070698_10206898213300005471Corn, Switchgrass And Miscanthus RhizosphereMTGSMLKSIALCVGVLVCVAFSSAGAADKKAKEGQITGRVQMIDKDKSTIMVAKGNTPRQVMYNSDTKWAYGTEGSNKPSSFDELKENWYINCKGTYDGV
Ga0070699_10027467013300005518Corn, Switchgrass And Miscanthus RhizosphereMTYGKLTSFVLCIGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLMVMKGTTQREVIYNSDTKWMRGTQGSNKPASLDDLKENWYINCEGKFDGVKLVASACRFREAK*
Ga0070697_10184458013300005536Corn, Switchgrass And Miscanthus RhizosphereMKLSKLTTFVLCLGVAVGPAMSPAGAADKKAKEGQITGTVHMIEKDKSMIVVTKGNVQRQVIYNDGTRWMHGTEASNKPSSLDELKENWYVNCKGTYDGIKLVASACRFRESK*
Ga0070733_1003271723300005541Surface SoilMTRSNLTSFMLCLGIVGGMAIDPAWAADKKAAEGQITGRVHMIEKDKSTILVMKGNTQRQVIYNSDTKWMQGTQASNKPSSLDELKENWYVNCKGTFDGVKLVASACRFRESK*
Ga0070732_1004665533300005542Surface SoilMTRSKLARFVLCLGVVAGTAMGPAGAAGKKAKDGQITGTVHMIEKDKSTIMVMKGNLQRQVIYNSDTKWMYGTQSSNKLSSLDELKENWYVNCKGTFDGVKLVASACRFRESK*
Ga0070732_1017596923300005542Surface SoilMTRRKLTSFLLCVGILVGITIGPASAADKKAKKGQITGTVHMIDKDKSTLTVTKGTTSRQVVYNSDTKWMKGTQASNQPSSLDDLKENWYINCEGTFEGVKLVASACRFREHK*
Ga0070717_1216710913300006028Corn, Switchgrass And Miscanthus RhizosphereMRRSILTSFVLCLGVLACVAINPAGAADKKAREGQITGRVHMIEKDKSTIVVMKGNTQRQVIYNSDTKWMYGTQASNKPSSLDELKENWYINCTGTFDGFKLVASACRFRERK*
Ga0075029_10033307813300006052WatershedsMMTSSKLTSIALCLGVLVGITISPAGAADKKAKEGQITGTVHMIDKDKSTLTVTKGTVTRQVMYNSDTKWMKGTESSNNPASLDDLKENWYINCKGTFDGVKLVANACRFREGK*
Ga0075015_10013229423300006102WatershedsMTSSKLTSIALCLGVLVGITISPAGAADKKAKEGQITGTVHMIDKDKSTLTVTKGTVTRQVMYNSDTKWMKGTESSNNPASLDDLKENWYINCKGTFDGVKLVANACRFREGK*
Ga0075030_10079091123300006162WatershedsMMTSSKLTSIALCLGVLVGITISPAGAADKKAKEGQITGTVHMIDKDKSTLTVTKGTVTRQVMYNSDTKWMKGTESSNNPASLDDLKENWYIN
Ga0079220_1169188613300006806Agricultural SoilRRNYMTRRKLTSFLLCVGILAGITIGPASAADKKAKKGQITGTVHMIDKDKSTLTVTKGTTSRQVVYNSDTKWMKGTQASNQPSSLDELKENWYINCEGTFEGVKLVASACRFREHK*
Ga0075434_10023457023300006871Populus RhizosphereMKRCNLTSFVLCFGILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTLVVMKGNSQREVIYNSDTKWMYGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRTSK*
Ga0073928_1042610113300006893Iron-Sulfur Acid SpringMDSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTVTKGTTTRQVIYNSDTKWMQGTEASNKPSSLDELKENWYINCKGKFDGVKL
Ga0075426_10003863133300006903Populus RhizosphereMRPPVVIGMAIGPARAADKKTIEGQVTGRVHMIEKDKSTIVVMKGTTQRRVTYDSDTKWMYGTQANNKPSSLDDLKENWYVNCKGTFDGVKLAASACRFRESK*
Ga0075426_1155002113300006903Populus RhizosphereMKLSKLTTFVLCLGVAVGPAMAGAADKKAKEGQITGTVHMIEKDKSMIVVTKGNVQRQVIYNDGTRWMHGTEASNKPSSLDELKENWYVNCKGTFDGVKLVASACRFRESK*
Ga0075435_10026359623300007076Populus RhizosphereMNRCVLTGFVLCFSILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTLVVMKGNSQREVIYNSDTKWMYGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRTSK*
Ga0099794_1041742113300007265Vadose Zone SoilMTRCILTSFVLCLSLACVAINPAGAAEKKAKEGQINGRVQMIEKDKSTITVMKGNTSRQVIYNGDTKWMYGTQASNKPGSFDERKENWYINCTGTFDGVKLVASACRFRESK*
Ga0099829_1036319123300009038Vadose Zone SoilMKRCILTSFVLCFGILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTIVVTKGATQRQVIYNSDTKWMHGTHASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRESK*
Ga0099829_1098905513300009038Vadose Zone SoilMCLGVVVGLAIGPAGAADKKAKEGQITGTVHMINKDKSTIMVMKGSTQREVIYNSDTKWMRGTQGNNKPSSLDDLKENWYINCEGTFDGVKLAASACRFREAK*
Ga0099830_1171362613300009088Vadose Zone SoilVKSIALCVGILVCVAFSSAGAADKKAKEGQITGTVHMIDKDKSTIVVTKGATQRQVIYNSDTKWMHGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRESK*
Ga0099828_1023454523300009089Vadose Zone SoilMCLGVVVGLAIGPAGAADKKAKEGQITGTVHMINKDKSTIMVMKGTTQREVIYNSDTKWMRGTQGNNKPSSLDDLKENWYINCEGTFDGVKLVASACRFREAK*
Ga0105245_1175658813300009098Miscanthus RhizosphereTSFVICLGVAVGMAIGPARAADKKAKEGQVTGRVHLIEKDKSTIVVMKGNMQRRVIYNNDTKWMYGAQASTKPSSLDELKENWYLSCKGTFDGANLVASTCRFRESK*
Ga0066709_10371701213300009137Grasslands SoilMCLAVVVGLAIGPPGTADKKAKEGQITGKVHMIDKDKSTITVMKGGTPRQVIYSSDTKWMRGTEASNKPSSLDDLKENWYINCKGTYDGVKLVASACRFREAK*
Ga0134128_1300366813300010373Terrestrial SoilMAFSLAEAANKKAKEGQITGRVQMIDKDKSTIMVAKGNTPRQVIYNSDTKWTYGTQASNKPSSLADLKEKWYINCMGTFDGVKLVASACRFRESK*
Ga0136449_10044989923300010379Peatlands SoilMMTRSKLTSFVLCVGVALGITMGPAAAADKKPKEGQITGSVHMIDKDKSTLTVMKGTSSRQVIYNSDTKWMKGTEASNKPASFDDLKENWYINCKGTFDGVKLVANACRFRESK*
Ga0137392_1097735413300011269Vadose Zone SoilVKSIALCVGILVCVAFSSAGAADKKAKEGQITGTVHMIDKDKSTIMVMKGTTQREVIYNSDTKWMRGTQGNNKPSSLDDLKENWYINCEGTFDGVKLVASACRFRESK*
Ga0137392_1150059623300011269Vadose Zone SoilACVAINPAGAAEKKAREGQINGRVHMIEKDKSTIVVRKGTTQRQVIYNSDTKWIYGTQTRNKPSSFDELKENWYINCRGTFDGVKLVASACRFRESK*
Ga0137391_1044510623300011270Vadose Zone SoilVKSIALCVGILVCVAFSSAGAADKKAKEGQITGTVHMIDKDKSTIVVTKGATPRQVIYNSDTKWMHGTQASSKPSSLDELKENWYINCEGKFDGVKLVANACRFRASK*
Ga0137391_1110363113300011270Vadose Zone SoilEKSKGETMTYGKLTSFVLCIGVVAGITIGQAAAADKKAKEGQITGTVHMIDKDKSTLMVMKGTTQREVIYNSDTKWMRGTQGSNKPASLDDLKENWYINCEGKFDGVKLVASACRFREAK
Ga0137388_1048945213300012189Vadose Zone SoilNPAGAAEKKAKEGQLNGRVQMIEKDKSTIMVMKGNTSRLVIYNSDTKWMYGTQAGNKPSSFDELKENWYINCRGTFDGVKLVASACRFRESK*
Ga0137388_1073548023300012189Vadose Zone SoilMKRCILTSFVLCFGILVCLTIGPAGAADKKAKEGQITGKVHMIEKDKSTIVVSKGVIQRQVTYNSDTKWMYGTHASNKPGSLDELKENWYINCKGTFDGVKLVASACRFRESK*
Ga0137363_1034685223300012202Vadose Zone SoilMKRCILTSFVLCFGILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTIVVTKGATPRQVIYNSDTKWMHGTQASNKPSSLDELKENWYINCEGKFEGVKLVASACRFREAK*
Ga0137399_1017366823300012203Vadose Zone SoilMKRFILTSFTLCLGLACVAINPAGAAEMKAKEGQLTGRVQMIEKNKSTIMVMKGNMSRQVIYNSDTKWTYGTEASNKPGSFNELKENWYINCRGTFDGVKLVASACRYRESK*
Ga0137362_1012873343300012205Vadose Zone SoilMKRCILTSFVLCFGILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTLVVMKGNSQREVIYNSDTKWMYGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRTSK*
Ga0137362_1033193023300012205Vadose Zone SoilMTRCILTSFVLCLSLACVAINPAGAAEKKAKEGQINGRVQMIEKDKSTITVMKGNTSRQVIYNGDTKWMYGTQASNKPGSFDELKENWYINCTGTFDGVKLVASACRFRESK*
Ga0137362_1033302023300012205Vadose Zone SoilMKRCILTSFVLYLSLACVAINPAGAAEKKAKEGQINGRVQMIEKDKATIVVRKGTTQRQVIYNSDTKWMYGTQTSNKPGSFDELKENWYINCKGTFDGVKLVASACRFRESK*
Ga0137380_1081094323300012206Vadose Zone SoilVKSIALCVGILVCVAFSLAGADKKAKEGQITGTVHMIDKDKSTIVVTKGATPRQVIYNSDTKWMHGTQASSKPSSLDELKENWYINCEGKFDGVKLVASACRFREAK*
Ga0137378_1051170723300012210Vadose Zone SoilMCLAVVVGLAIGPAGAADKKAKEGQITGKVHMIDKDKSTITVMKGGTPRQVIYSSDTKWMRGTEASNKPSSLDDLKENWYINCKGTYDGVKLVASACRFREAK*
Ga0137378_1088837723300012210Vadose Zone SoilLKSIALCLGTLVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTIVVTKGATPRQVIYNSDTKWMHGTQASSKPSSLDELKENWYMNCKGKFDGVKLVASACRFREAK*
Ga0137387_1111376313300012349Vadose Zone SoilMTRCILTSFVLCLSLACVAINPAGAAEKKAKEGQINDRVQMIEKDKATIVVRKGTTQRQVIYKSDTKWMYGTQTSNKPGSFDELKEGWYINCKGTFDGVKLVASACRFRESK*
Ga0137390_1033852213300012363Vadose Zone SoilVKSIALCVGILVCVAFSSAGAADKKAKEGQITGTVHMIDKDKSTIVVTKGATQRQVIYNSDTKWMHGTQASSKPSSLDELKENWYINCEGKFDGVKLVASACRFREAK*
Ga0137397_1090923813300012685Vadose Zone SoilMKRFILTSFTLCLGLACVANNPAGAAEMKAKEGQLTGRVQMIEKNKSTIMVMKGNMSRQVIYNSDTKWTYGTEASNKPGSFNELKENWYINCRGTFDGVKLVASACRDRESK*
Ga0137396_1049052723300012918Vadose Zone SoilMKRFILTSFTLCLGLACVANNPAGAAEMKAKEGQLTGRVQMIEKNKSTIMVMKGNMSRQVIYNSDTKWTYGTEASNKPGSFNELKENWYINCRGTFDGVKLVASACRYRESK*
Ga0137419_1002143533300012925Vadose Zone SoilLIEEKRGTVKRFILTSFTLCLGLACVANNPAGAAEMKAKEGQLTGRVQMIEKNKSTIMVMKGNMSRQVIYNSDTKWTYGTEASNKPGSFNELKENWYINCRGTFDGVKLVASACRYRESK
Ga0137419_1082310323300012925Vadose Zone SoilMTRCILTSFVLCLCVLACVAINPAGAAEKKAKGGQINGRVHMIEKDKSTIVVRKGTTQRQVIYNSDTKWIHGTQASNKPSSLDELKENWYINCKGTFDGVKLVASACRFRESK*
Ga0137403_1069394213300015264Vadose Zone SoilNPAGAAEKKAKEGQINGRVQMIEKDKATIVVRKGTTQRQVIYNSDTKWMYGTQTSNKPGSFDELKENWYINCKGTFDGVKLVASACRFRESK*
Ga0187818_1001888823300017823Freshwater SedimentMTRSILTNIALYLGVLAGIAIVPARAADPKAKEGRITGTVHMMEKDKSTIVVRKGNVERQVIYNGNTKWLYGTQASSKPSSFDQLKQDWYINCQGTFEGMKLVASACRFRESK
Ga0187779_1028392813300017959Tropical PeatlandMTRSKLTRLVLCLGIVAGITLAPAAAAGKKAKKGQITGNVHMIDKDKSTLTVTKGNVSRQVVYNSDTKWLMGTQASNKPATFDDLKENWYINCEGTFDGVKLVASACRFRESK
Ga0187780_1013014423300017973Tropical PeatlandMTRSKLTRLVLCLGIVAGITLAPAAAAGKKAKKGQITGTVHMIDKDKSTLTVTKGNVSRQVVYNSDTKWLMGTQASNKPATFDDLKENWYINCEGTFDGVKLVASACRFRESK
Ga0187794_173589513300019273PeatlandMMTRSKLTSFVLCLGVAVGMTIGPVGAADKKAKEGQITGTVHMIDKDKSTLTVTKGTTQRLVIYNSDTKWMRGTEASNKPSSLDDLKENWYINCKGTFDGVKLVASACRFRETK
Ga0193755_106874123300020004SoilMKRCILTSFVLCFSILVCLTIGPAGAADKKAKEGKITGTVHMIDKDKSTLVVMKSNSQRQVIYNSDTKWLYGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRTSK
Ga0210407_1002505823300020579SoilMMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTVTKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCKGKFDGVKLVADACRFRASK
Ga0210399_1010285933300020581SoilMMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTITKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCKGKFDGVKLVADACRFRASK
Ga0210404_1027590323300021088SoilMMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTITKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCKGKFDGV
Ga0210406_1127109413300021168SoilFSVVDEKSKGETMTYGKLTNFVLCVGVVAGITIGQAAAADKKAKEGQITGTVHMIDKDKSTLMVMKGTTQREVIYNSDTKWMRGTQGSNKPASLDDLKENWYINCEGKFDGVKLVASACRFREAK
Ga0210410_1171405213300021479SoilMMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTITKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINC
Ga0242664_115580213300022527SoilKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTVTKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCKGKFDGVKLVADACRFRASK
Ga0242660_125778223300022531SoilGVVAGITIGQAAAADKKAKEGQITGTVHMIDKDKSTLMVMKGTTQREVIYNSDTKWMRGTQGSNKPASLDDLKENWYINCEGKFDGVKLVASACRFREAK
Ga0242655_1029811713300022532SoilMTGSMLKSIALCVGVLVCVAFSSAGAADKKAKEGQITGRVQMIDKDKSTIMVAKGNTPRQVVYNGDTKWAYGTEGSSKPSSFDDLKENWYINCKGTYDGVKLVASACRFRESK
Ga0242657_124776013300022722SoilMMTRSKLTSFVLCLGVVAGITIGAAAAADKKAKEGQITGTVHMIDKDKSTLTVMKGTTSRQVIFNSDTKWMRGTEASNKASSLDDLKENWYINCKGTFDGVKLVANACRFRESK
Ga0242665_1029589713300022724SoilTFQGPNVAAKGSNYMTRSKLTSFVLCVGMVVGIMVGPSWAADKKAKKGQITGTLHMIDKDKSTLTVTKGTVSRQVVYNSDTKWMKGTQASNQPSSLDELKENWYINCEGTFDGVKLVASACRFREHK
Ga0242654_1002033023300022726SoilMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTITKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCKGKFDGVKLVADACRFRASK
Ga0207665_1029950523300025939Corn, Switchgrass And Miscanthus RhizosphereMTYGKLTSFVLCIGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLMVMKGTTQREVIYNSDTKWMRGTQGSNKPASLDDLKENWYINCEGKFDGVKLVASACRFREAK
Ga0209580_1008510913300027842Surface SoilMTRRKLTSFLLCVGILVGITIGPASAADKKAKKGQITGTVHMIDKDKSTLTVTKGTVSRQVVYNSDTKWMKGTQASNQPSSLDDLKENWYINCEGTFE
Ga0209580_1025164523300027842Surface SoilMTRSKLTSFVFCLGVVAGTAMGPAGAAGKKAKDGQITGTVHMIEKDKSTIMVMKGNLQRQVIYNSDTKWMYGTQSSNKLSSLDELKENWYVNCKGTFDGVKLVASACRFRESK
Ga0209180_1044173913300027846Vadose Zone SoilMKRRISTSFVLCFGLACVAINPAGAAEKKAKEGQINGRVQMIEKDKATIVVRNGTTQRQVIYNSDTKWMYGTQTSNKPGSFDELKENWYINCKGTFDGVK
Ga0209701_1013417323300027862Vadose Zone SoilMKRCILTSFVPYLSLACVAINPAGTAEKKAKEGQINGRVQMIEKDKATIVVRKGTTQRQVIYNSDTKWMYGTQTSNKPGSFDELKENWYINCKGTFDGVKLVASACRFRESK
Ga0209167_1001752743300027867Surface SoilMTRSNLTSFMLCLGIVGGMAIDPAWAADKKAAEGQITGRVHMIEKDKSTILVMKGNTQRQVIYNSDTKWMQGTQASNKPSSLDELKENWYVNCKGTFDGVKLVASACRFRESK
Ga0222749_1061073613300029636SoilMTRSNLTSFVLCLGVVVAMAIGPAGAADKKAKEGQITGTVHMIDKDKSTIAVMKGTTQRQVIYNSDTKWMYGTQASNKPSSLGELKENWYINCE
Ga0170834_10097832713300031057Forest SoilMMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTVTKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCEGTFDGVKLVATACRFRESK
Ga0308194_1015960413300031421SoilTMRRSIVKSIALCVGVLVCVAFSSAGAADKKAKEGQITGTVHMIDKDKSTIVVMKGTMQRQVIYNSDTKWMHGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRAAK
Ga0308194_1029745313300031421SoilMKRSIFKPIALCVGFVVCIAFSPAGAAEKKAKEIQVTGRVQSIDKGKSTITVAKGNTPRPVSYNSDTKWMSGTETRNKPSSLEELKENWYINCKGTSDGGKLVASVCRFRESK
Ga0307469_1017640213300031720Hardwood Forest SoilMKRCILTSFVLCFGILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTLVVMKGNSQREVIYNSDTKWMYGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRTSK
Ga0307469_1020860923300031720Hardwood Forest SoilMTYGKLTSFVLCIGVVASITIGPAAAADKKAKEGQITGTVHMIDKDKSTLMVMKGTTQREVIYNSDTKWMRGTQGSNKPASLDDLKENWYINCEGKFDGVKLVASACRFREAK
Ga0307475_1073843713300031754Hardwood Forest SoilMMTRSKLTSFVLCLGVVAGITIGPAAAADKKAKEGQITGTVHMIDKDKSTLTVTKGTTTRQVIYNSDTKWMQGTEASNKPSSFDELKENWYINCKGKFDGVKLVADACR
Ga0307473_1029917923300031820Hardwood Forest SoilMKRCILTSFVLCFGILVCLTIGPAGAADKKAKEGQITGTVHMIDKDKSTLVVMKGNSQRQVIYNSDTKWMYGTQASNKPSSLDELKENWYINCEGTFDGVKLVASACRFRTSK
Ga0307473_1094089823300031820Hardwood Forest SoilMTRSNLTSFTVCLGVVIGMAIGPARAADKKTIEGQVTGRVHMIEKDKSTIVVMKGTTQRRVTYNSDTKWMYGTQTNNKPSSLDDLKENWYVNCKGTFDGVKLAASACRFRESK
Ga0307473_1103182213300031820Hardwood Forest SoilMTRCILTSFVLCLSLACVAINPAGAAEKKAKEGQINGRVQMIEKDKATIVVRKGTTQRQVIYNSDTKWMYGTQTSNKPGSFDELKENWYINCKGTFDGVKLVASACRFRESK
Ga0306921_1267090223300031912SoilMRHRILTPIALCLTVLMCMLISPTRAADKKAEEGRVNGTVHMFNKDASTIVITKGNLQWQVIYTNNTKWAYGTQADNKPSSLDQLKEGWYVNCKGKFDGLKLVASACRFREAK
Ga0307479_1022211023300031962Hardwood Forest SoilFVLCVGVVAGITIGQAAAADKKAKEGQITGTVHMIDKDKSTLMVMKGTTQREVIYNSDTKWMRGTQGSNKPASLDDLKENWYINCEGKFDGVKLVASACRFREAK
Ga0307479_1124491113300031962Hardwood Forest SoilQATTFQGPNVAAKGSNYMTRSKLTSFVLCVGMVVGIMVGPSWAADKKAKKGQITGTLHMIDKDKSTLTVTKGTVSRQVIYNSDTKWMKGTQASNQPSSLDELKENWYINCEGTFDGVKLVASACRFREHK
Ga0311301_1043343923300032160Peatlands SoilMTRSKLTSFVLCVGVAVGMTMGPAAAADKKPKEGQITGSVHMIDKDKSTLTVMKGTSSRQVIYNSDTKWMKGTEASNKPASFDDLKENWYINCKGTFDGVKLVANACRFRESK
Ga0335082_1006494133300032782SoilMMTRSKLTSFLLCLGVAVGMTIGPAGAADKKAKEGQITGTVHMIDKDKSTLTVTKGTTQRLVIYNSDTKWMRGTEASNKPSSLDDLKENWYINCKGTFDGVKLVASACRFRETK
Ga0335079_1005005343300032783SoilMTRSKLTSFVLCVGVVVGLTMGPAWAADKKPKHGQITGTVHMIDKDKSTLTVMKGTTSRQVVYNSDTKWLRGTQASNKPSSLDDLKENWYINCEGTFDGVKLVASACRFREHK
Ga0335079_1006883833300032783SoilMRTRSKLTSFVLCLGIVAGITIGPAVAADKMAKKGQLTGTVHMIDKDKSTITVMKGTTSRQVVYNSDTKWLRGTQASNKPSSLDDLKENWYINCEGTFDGVKLVASACRFREAK
Ga0335079_1044392423300032783SoilMTRSKLTSFVLCLGVVVGITIGPAGAADKKAMEGQVTGTVHMIEKDKSMIVVMKGNTQRQVIYNSDTKWMQGTEASNKPSSLDDLKENWYVNCKGTFDGVKLVASACRFRESK
Ga0335079_1068300413300032783SoilMTRSILTNIVLYLGVLAGIAAVPAGAAEPKAKEGRITGTVHMLEKDKSTIVVRKGNIERHVIYNNGTKWIYGTQASNKPSSLDELKENWYINCQGSFEGMKLVASACRFRESK
Ga0335080_1109847213300032828SoilMTRSKLTSFVLCLGIVAGITIGPAVAADKMAKKGQLTGTVHMIDKDKSTITVMKGTTSRQVVYNSDTKWLRGTQASNKPSSLDDLKENWYINCEGTFDGVKLVASACRFREAK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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