NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104793

Metagenome / Metatranscriptome Family F104793

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104793
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 50 residues
Representative Sequence TGPSWGRTNVDWRNREHFGAPNAKVGLDIDGDRFAELIVERISSLG
Number of Associated Samples 90
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.00 %
% of genes from short scaffolds (< 2000 bps) 93.00 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.000 % of family members)
Environment Ontology (ENVO) Unclassified
(26.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.97%    β-sheet: 2.70%    Coil/Unstructured: 74.32%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02900LigB 80.00
PF01580FtsK_SpoIIIE 4.00
PF13727CoA_binding_3 1.00
PF09397FtsK_gamma 1.00
PF13491FtsK_4TM 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1674DNA segregation ATPase FtsK/SpoIIIE or related proteinCell cycle control, cell division, chromosome partitioning [D] 4.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.00 %
UnclassifiedrootN/A6.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918007|ConsensusfromContig159771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium601Open in IMG/M
2170459006|GBPF9FW01DAW9CAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300001534|A15PFW1_10259575All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300001538|A10PFW1_10108148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium749Open in IMG/M
3300002568|C688J35102_117715269All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300002568|C688J35102_119376573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium683Open in IMG/M
3300002568|C688J35102_119616017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium732Open in IMG/M
3300004081|Ga0063454_101367832All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300004153|Ga0063455_101632860All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005327|Ga0070658_10702524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes878Open in IMG/M
3300005332|Ga0066388_100682977All Organisms → cellular organisms → Bacteria1636Open in IMG/M
3300005339|Ga0070660_101377901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes599Open in IMG/M
3300005355|Ga0070671_101866713All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005435|Ga0070714_101053810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium792Open in IMG/M
3300005435|Ga0070714_101727943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300005436|Ga0070713_101396021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium679Open in IMG/M
3300005437|Ga0070710_10981886All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005439|Ga0070711_102061902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300005456|Ga0070678_101176665All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005456|Ga0070678_102284982All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300005458|Ga0070681_12030535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli503Open in IMG/M
3300005535|Ga0070684_100459600All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300005539|Ga0068853_101346103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium690Open in IMG/M
3300005555|Ga0066692_10797450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300005564|Ga0070664_102375661All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300006800|Ga0066660_11028899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300006806|Ga0079220_11405742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300006904|Ga0075424_100539789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli1245Open in IMG/M
3300006904|Ga0075424_101577703All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300007076|Ga0075435_101736438All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300009098|Ga0105245_12990682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium524Open in IMG/M
3300009137|Ga0066709_103370829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300010359|Ga0126376_10605399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1037Open in IMG/M
3300010366|Ga0126379_13746823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300010376|Ga0126381_103149201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium653Open in IMG/M
3300010396|Ga0134126_10995090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria939Open in IMG/M
3300010399|Ga0134127_13645674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300011271|Ga0137393_10911254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium750Open in IMG/M
3300012011|Ga0120152_1100765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300012014|Ga0120159_1022972All Organisms → cellular organisms → Bacteria2268Open in IMG/M
3300012359|Ga0137385_10963750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300012929|Ga0137404_11761423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium576Open in IMG/M
3300012951|Ga0164300_10007850All Organisms → cellular organisms → Bacteria3208Open in IMG/M
3300012955|Ga0164298_10024453All Organisms → cellular organisms → Bacteria2629Open in IMG/M
3300012960|Ga0164301_10012487All Organisms → cellular organisms → Bacteria3501Open in IMG/M
3300012960|Ga0164301_11204033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium609Open in IMG/M
3300012960|Ga0164301_11283932Not Available592Open in IMG/M
3300012977|Ga0134087_10816717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300012987|Ga0164307_11249729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium618Open in IMG/M
3300012988|Ga0164306_11564325All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium567Open in IMG/M
3300012989|Ga0164305_11237939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium649Open in IMG/M
3300012989|Ga0164305_11956274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium534Open in IMG/M
3300013100|Ga0157373_10350022All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300013832|Ga0120132_1056320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium769Open in IMG/M
3300014497|Ga0182008_10321310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium814Open in IMG/M
3300015371|Ga0132258_10916905All Organisms → cellular organisms → Bacteria2212Open in IMG/M
3300015373|Ga0132257_100660023All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300015374|Ga0132255_105089622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300017961|Ga0187778_11093587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300018468|Ga0066662_10994197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium830Open in IMG/M
3300018482|Ga0066669_11033654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium742Open in IMG/M
3300020016|Ga0193696_1177994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300020069|Ga0197907_10458354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium655Open in IMG/M
3300020081|Ga0206354_11695196Not Available1138Open in IMG/M
3300020082|Ga0206353_11718285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium674Open in IMG/M
3300025898|Ga0207692_10817271Not Available610Open in IMG/M
3300025905|Ga0207685_10308801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium785Open in IMG/M
3300025906|Ga0207699_10406790All Organisms → cellular organisms → Bacteria970Open in IMG/M
3300025911|Ga0207654_11126135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium572Open in IMG/M
3300025914|Ga0207671_10277276All Organisms → cellular organisms → Bacteria1322Open in IMG/M
3300025916|Ga0207663_10244983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1316Open in IMG/M
3300025928|Ga0207700_12045732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300025932|Ga0207690_10057664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium2624Open in IMG/M
3300025939|Ga0207665_10650582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium826Open in IMG/M
3300025939|Ga0207665_11179103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300025949|Ga0207667_10430446All Organisms → cellular organisms → Bacteria1342Open in IMG/M
3300025949|Ga0207667_10598297Not Available1112Open in IMG/M
3300026121|Ga0207683_10728537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium920Open in IMG/M
3300026275|Ga0209901_1076820Not Available695Open in IMG/M
3300026494|Ga0257159_1052999Not Available690Open in IMG/M
3300028379|Ga0268266_11547735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium639Open in IMG/M
3300028558|Ga0265326_10054728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1129Open in IMG/M
3300028653|Ga0265323_10280884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300028792|Ga0307504_10263036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium636Open in IMG/M
3300028824|Ga0307310_10144098All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300028875|Ga0307289_10358608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium600Open in IMG/M
3300031241|Ga0265325_10098628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1433Open in IMG/M
3300031751|Ga0318494_10561224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium667Open in IMG/M
3300031796|Ga0318576_10473616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300031879|Ga0306919_10498061All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300031938|Ga0308175_101262320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium822Open in IMG/M
3300031939|Ga0308174_10107429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2013Open in IMG/M
3300032008|Ga0318562_10579149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium649Open in IMG/M
3300032009|Ga0318563_10262404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium934Open in IMG/M
3300032041|Ga0318549_10092357All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300032066|Ga0318514_10122558All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300032261|Ga0306920_104449417All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300032893|Ga0335069_12611745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
3300033004|Ga0335084_11139660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium781Open in IMG/M
3300034268|Ga0372943_0599397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium723Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost5.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil5.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere3.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere3.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.00%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.00%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
2170459006Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cmEnvironmentalOpen in IMG/M
3300001534Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013832Permafrost microbial communities from Nunavut, Canada - A3_5cm_0MEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026275Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes)EnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028558Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaGHost-AssociatedOpen in IMG/M
3300028653Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaGHost-AssociatedOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_026432302140918007SoilVRDAFIEVDCSTGPSWGRTNVDWRNRDHFGPPNAKVGLDIDGERFAELVVERISSLP
L01_028772102170459006Grass SoilPCASPHLIDPTLMVVKDAAIEVDCSTGPSWGRTNVDARGREHFGPPNAKVGVDIDGARFGELVVERINSLP
A15PFW1_1025957513300001534PermafrostCSGGPSWGRTNVDWRNREHFGDPNAKVGVDIDGNRFAELIVERISSLG*
A10PFW1_1010814813300001538PermafrostGPSWGRTNVDWRGREHFGAPNAKVGLDIDGARFAELVVERITALA*
C688J35102_11771526913300002568SoilVDCSAGPSWGRTNVDWRNREHFGDPNAKVGLDIDGDRFAALVVERISTLG*
C688J35102_11937657323300002568SoilASIEVDCSGGPSWGRTNVDWRGREHFGAPNAKVGVDIDGDRFAELIVDRISSFDR*
C688J35102_11961601713300002568SoilPSWGRTNVDARGREHFGEPNAKVGVDIDGARFAELVVERVSSLG*
Ga0063454_10136783213300004081SoilEIGEAFIEVDCSTGPSWGRTNVDWRNRDHFGPPNAKVALDIDAERFAELVVERISALG*
Ga0063455_10163286013300004153SoilTLMEVKDAFIEVDCSTGPSWGRTNVDWRNREHFGAPNAKVGVDIDGDRFADLVVERISSLS*
Ga0070658_1070252413300005327Corn RhizosphereAHLIDPTLMDVHDAFIEVDCTTGPSWGRTNVDWRGREHFGDPNAKVGLDIDGARFAELVVERISSLG*
Ga0066388_10068297713300005332Tropical Forest SoilGPSWGRTNVDWRGREHFPAPNAQVGLDIDGNRFGELVVERIGSLG*
Ga0070660_10137790113300005339Corn RhizosphereHVVDPSLMTARDAFIEVDCSAGPSWGRTNVDWRGREHFGAPNAKVGLDIDGDAFAELVIERLASLG*
Ga0070671_10186671323300005355Switchgrass RhizosphereGRTNVDWRNREHFGAPNAKVGLDIDGDRFAELVVERISNLP*
Ga0070714_10105381013300005435Agricultural SoilMTVRDAHIDVDCSGGPSWGRTNVDWRGREHVPPPNAKVGVDIDGDRFAQLIVERISSL*
Ga0070714_10172794323300005435Agricultural SoilGPSWGRTNVDWRNREHFGPPNAKVALAIDGDRFAELVVERISSLP*
Ga0070713_10139602123300005436Corn, Switchgrass And Miscanthus RhizosphereAFIEVDCSTGPSWGRTNVDWRGREHFGEPNATVGLDIDGERFAELVVSRINSLT*
Ga0070710_1098188613300005437Corn, Switchgrass And Miscanthus RhizosphereFIEVDCSTGPSWGRTNVDWRGREHFGEPNATVGLDIDGGRFAELVVSRINSLT*
Ga0070711_10206190223300005439Corn, Switchgrass And Miscanthus RhizospherePSWGRTNVDWRGREHFGPPNARVALDIDGERFAELVVERISSLP*
Ga0070678_10117666513300005456Miscanthus RhizosphereAFIEVDLTTGPSWGRTNVDWRNREHFGAPNAKVGLDIDGDRFAELVVERISNLP*
Ga0070678_10228498223300005456Miscanthus RhizosphereAFIEVDCSTGPSWGRTNVDWRNREHFGDPNAKVGLDIDGDRFAELIVERISSLG*
Ga0070681_1203053513300005458Corn RhizosphereGPSWGRTNVDWRNREHFGDPNAKVGTDIDGERFAELVVERISSLG*
Ga0070684_10045960013300005535Corn RhizosphereLMGVKDAFIEVDCSTGPSWGRTNVDWRNREHFGDPNAKVGLDIDGDRFAELIVERISSLG
Ga0068853_10134610323300005539Corn RhizosphereTNVDWRGREHFGAPNAKVGLDIDGDAFARMVVERISSLP*
Ga0066692_1079745023300005555SoilDWRGREHFGPPNAKVGVGIDGERFAELVVERITALK*
Ga0070664_10237566113300005564Corn RhizosphereVLDAFIEVDCSGGPSWGRTNVDWRGREHFGPPNAKVGVDIDGERFAELIVERISSLG*
Ga0066660_1102889923300006800SoilWGRTNVDWRSREHSPPPNAKVGVDIDGNRFAELIVERISSLG*
Ga0079220_1140574213300006806Agricultural SoilSWGRTNVDWRRREHSLPPNAKAAFEIDGERFAKLIVERISSLG*
Ga0075424_10053978933300006904Populus RhizospherePSWGRTNVDWRNREHFGAPNAKVGLDIDGDRFGELVVERISALP*
Ga0075424_10157770323300006904Populus RhizosphereGRGRTNADWRGRGGNEPNAKVGLGIDGERFARLVVERVTSLS*
Ga0075435_10173643813300007076Populus RhizosphereDCGWEQGRGRTNADWRGRGGNEPNAKVGLGIDGERFARLVVERVTSLS*
Ga0105245_1299068223300009098Miscanthus RhizosphereRGRTNVDWRGREHFGEPNAKVALDIDGARFAELVVERISSFA*
Ga0066709_10337082923300009137Grasslands SoilAALVEVDCTTGPSWGRTNVDWRGREHFGPPNAKVGVDIDGRRFAELVVGRIASLQ*
Ga0126376_1060539913300010359Tropical Forest SoilTGPSWGRTNVDWRNREHFGAPNAKVGLDIDGDRFAELIVERISSLG*
Ga0126379_1374682323300010366Tropical Forest SoilIEPGLVDVRKAYVQVDCSTGPSWGRTNVDWRGREHFPAPNAQVGLDIDGLRFGELVVERIGSLG*
Ga0126381_10314920123300010376Tropical Forest SoilAYIEVDCSTGPSWGRTNVDWRGREHFPAPNAQVGLDIDGPRFGELVVERIGSLG*
Ga0134126_1099509033300010396Terrestrial SoilDCTTGPSWGRTNVDWRGREHFGAPNAKVGLDIDGPRFADLVVERISQLG*
Ga0134127_1364567423300010399Terrestrial SoilPSWGRTNVDWRGREHFGAPNAKVGLDIDGPRFADLVVERISQLG*
Ga0137393_1091125423300011271Vadose Zone SoilDAFIEVDCSGGPSWGRTNVDWRNREHFGDPNAKVGVDIDGNRFAELIVERISSLG*
Ga0120152_110076513300012011PermafrostTGPSWGRTNVDWRGREHFGAPNAKVGLDIDGARFAELVVERITALA*
Ga0120159_102297213300012014PermafrostLIRPGLIRVRDAFIEVDCSTGPSWGRTNVDWRGREHFGAPNAKVGLDIDGDAFAELVVERVTSLDA*
Ga0137385_1096375023300012359Vadose Zone SoilVDWRNRAHFGAPNAKAALDIDGERFARLVVERITSLQ*
Ga0137404_1176142313300012929Vadose Zone SoilNVDWRGREHSAAPNAKVGVDIDGDRFAELIVERISSLG*
Ga0164300_1000785013300012951SoilRTNVDWRGREHFGPPNAKVGVDIDGDRFAELIVERISSLS*
Ga0164298_1002445313300012955SoilTVRDAHIEVDCSSGPSWGRTNVDWRGREHFGPPNAKVGVDIDGDRFAELIVERISSLS*
Ga0164301_1001248743300012960SoilDPTLMTVFDAFIEVDCSGGPSWGRTHVDSRGREHFGPPDAKVGVDIDGGRFAEMIVERISSLG*
Ga0164301_1120403323300012960SoilSWGRTNVDWRGREHFGPPNAKVGVDIDGDRFAELIVERISSLS*
Ga0164301_1128393213300012960SoilIEVDCSAGPSWGRTNVDWRGREHFGAPHAKVGLDIDGDAFAELVVGRVTSLDS*
Ga0134087_1081671723300012977Grasslands SoilWGRTNVDWRNREHFGAPNAKVGVGIDGERFAELVVERISSLS*
Ga0164307_1124972923300012987SoilTGPSWGRTNVDWRSREHFGDPNAKVGLDIDGDRFAELIVERISSLG*
Ga0164306_1156432523300012988SoilFIEVDCSTGPSWGRTNVDWRNREHFGDPNAKVGLDIDGDRFAELIVERISSLG*
Ga0164305_1123793923300012989SoilFIEVDCSSGPSWGRTNVDWRGREHFGPPNAKVGLDIDGARFAELVVQRITSFA*
Ga0164305_1195627423300012989SoilRDAFIDVDCSTGPSWGRTNVDWRGREHFGEPNAKVGVDIDGDRFAELVVSRITSLG*
Ga0157373_1035002213300013100Corn RhizospherePTLMQVADAFIEVDLTTGPSWGRTNVDWRNREHFGAPNAKVGLDIDGPRFAELIVERISSLG*
Ga0120132_105632023300013832PermafrostWRGREHLGAPNAKVGLDIDGARFAELVVERISSLP*
Ga0182008_1032131023300014497RhizosphereSWGRTNVDWRGREHFGAPNAKVGLDIDGPRFAELIVERISSLEA*
Ga0132258_1091690513300015371Arabidopsis RhizosphereVRDAFIEVDCSAGPSWGRTNVDWRNREHFGDPNAEVGLDIDGDRFAELIVERISSLT*
Ga0132257_10066002333300015373Arabidopsis RhizosphereRDAFIEVDCSTGPSWGRTNVDWRGREHFGPPNAKVALDVDGARFGELLIERIGQLG*
Ga0132255_10508962223300015374Arabidopsis RhizosphereCSTGPSWGRTNVDWRNREYFGDPNAKVGLDIDGDRFAELIVERISSLT*
Ga0187778_1109358713300017961Tropical PeatlandDCSGGPSWGRTNVDWRGRAYGEGANAHVGVDLDGERFAELLVDRISSLG
Ga0066662_1099419713300018468Grasslands SoilVDCTTGPSWGRTNVDWRRREHGSPPNAKVGVDIDGARFADLVVERIGSFER
Ga0066669_1103365413300018482Grasslands SoilVDCTTGPSWGRTNVDWRGREHFGPPNAKVGVDIDGTRFAELVVERISSLG
Ga0193696_117799413300020016SoilPSWGRTNVDWRNREHFGEPNAKVGLDIDGDRFAELIVERISSLG
Ga0197907_1045835423300020069Corn, Switchgrass And Miscanthus RhizosphereAYIEVDCTTGPSWGRTNVDWRGREHFGAPNAKVGLDIDGPRFAELIVERISSLG
Ga0206354_1169519613300020081Corn, Switchgrass And Miscanthus RhizosphereMDVHDAFIEVDCTTGPSWGRTNVDWRGREHFGAPNAKVGLDIDGARFAELVVERISSLG
Ga0206353_1171828513300020082Corn, Switchgrass And Miscanthus RhizosphereGPSWGRTNVDWRGREHFGAPNAKVGLDIDGPRFAELIVERISSLG
Ga0207692_1081727113300025898Corn, Switchgrass And Miscanthus RhizosphereGPSWGRTNVDWRGREHFGEPNAKVALDIDGARFAELVVERISSFA
Ga0207685_1030880123300025905Corn, Switchgrass And Miscanthus RhizosphereTRRREHFGEPNAKVGVGIDGDRFAELIVERVSSLT
Ga0207699_1040679013300025906Corn, Switchgrass And Miscanthus RhizosphereTGPSWGRTNVDWRGREHFGPPNAKVGLDIDGPRFAELIVERISSLG
Ga0207654_1112613513300025911Corn RhizosphereCTTGPSWGRTNVDWRGREHFGAPNAKVGLDIDGPRFADLVVERISQLG
Ga0207671_1027727613300025914Corn RhizosphereTNVDWRGREHSGPPNAKVGLDIDGPRFAELIVDRISSLG
Ga0207663_1024498333300025916Corn, Switchgrass And Miscanthus RhizosphereVADAFIEVDLTTGPSWGRTNVDWRNREHFGAPNAKVGLDIDGDHFAELVVERISNLP
Ga0207700_1204573213300025928Corn, Switchgrass And Miscanthus RhizosphereVDCSGGPSWGRTNVDWRGREHLPPPNAKVGVDIDGDRFAELIVERISALG
Ga0207690_1005766413300025932Corn RhizosphereDAYIEVDCTTGPSWGRTNVDWRGREHFGAPNAKVGLDIDGPRFAELIVERISSLG
Ga0207665_1065058223300025939Corn, Switchgrass And Miscanthus RhizosphereLIDPTLMDVRAAHIEVDCTTGPSWGRTNVDWRGREHFGPPNAKVGIDIDGGRFADLIVERISALS
Ga0207665_1117910313300025939Corn, Switchgrass And Miscanthus RhizosphereSGGPSWGRTNVDWRGREHSPPPNAKVGVDIDGDRFAELIVGRVSSLG
Ga0207667_1043044633300025949Corn RhizosphereDVRDALIEVDCGDGPSRGRTNVDWRDREHFGAPNGKVGLDLDGDAFARLVVERIASLG
Ga0207667_1059829713300025949Corn RhizosphereIAHLIDPTLMDVHDAFIEVDCTTGPSWGRTNVDWRGREHFGDPNAKVGLEIDGARFAELVVERISSLG
Ga0207683_1072853713300026121Miscanthus RhizosphereAFIEVDLTTGPSWGRTNVDWRNREHFGAPNAKVGLDIDGDRFAELVVERISNLP
Ga0209901_107682013300026275Permafrost SoilWGRTNVDCRGREHFGAPNAKVGLDIDGGAFGELVVERIISLDA
Ga0257159_105299913300026494SoilGPSWGRTNVDWRGREHFGAPNAKVAVDIDGDAFAELVVERIASLDA
Ga0268266_1154773523300028379Switchgrass RhizosphereDCSTGPSWGRTNVDWRNREHFGDPNAKVGLDIDGDRFAELIVERISSLG
Ga0265326_1005472813300028558RhizosphereDPTLMEVRDAFIEVDCTTGPSWGRTNVDWRNREHFDAPNAKVGLGIDGARFAELIVERIGSLG
Ga0265323_1028088423300028653RhizosphereRDAFIEVDCTTGPSWGRTNVDWRNREHFDAPNAKVGLGIDGARFAELIVERIGSLG
Ga0307504_1026303613300028792SoilTGPSWGRTNVDWRGREHFGAPNAKVGLDIDGARFAELVVERITALG
Ga0307310_1014409833300028824SoilVDWRGREHFGAPNAKVGLDIDGDAFAELVVGRVTSLDR
Ga0307289_1035860823300028875SoilPSWGRTNVDWRNREHFGDPNAKVGLDIDGDRFAELIVERISSLK
Ga0265325_1009862833300031241RhizosphereNVDWRNREHFDAPNAKVGLGIDGARFAELIVERIGSLG
Ga0318494_1056122423300031751SoilCSTGPSWGRTNVDWRGREHFPAPNAQVGLDVDGHRFGELVVERIGSLG
Ga0318576_1047361613300031796SoilSWGRTNVDWRGREHFPAPNAQVGLDVDGHRFSELVVERIGSLG
Ga0306919_1049806123300031879SoilEVDCSTGPSWGRTNVDWRGREHFGPPNAKVALDLDGSRFAELLIERLATLG
Ga0308175_10126232013300031938SoilDAVVDVDCSTGPSWGRTNVDWRNREYFGAPNAKVGIDIDGERFAQLVVDRIAALG
Ga0308174_1010742913300031939SoilIDPELVEVRAASIEVDCSGGPSWGRTNVDWRGREHFGAPNAKVGLDIDGDAFARMVVERISSLP
Ga0318562_1057914923300032008SoilAYIEVDCSTGPSWGRTNVDWRGREHFPAPNAQVGLDVDGHRFGELVVERIGSLG
Ga0318563_1026240423300032009SoilGRTNVDWRGREHFPAPNAQVGLDVDGHRFSELVVERIGSLG
Ga0318549_1009235713300032041SoilGPSWGRTNVDWRGREHFGPPNAKVALDLDGSRFAELLIERLAPLG
Ga0318514_1012255833300032066SoilSTGPSWGRTNVDWRGREHFGPPNAKVALDLDGSRFAELLIERLATLG
Ga0306920_10444941713300032261SoilMDVREAFIEVDCTTGPSWGRTNVDWRGRGHFGTPNAKVGLDIDGARFAALVVERISAL
Ga0335069_1261174523300032893SoilCTEGPSRGRTNVDHRGREHFEPPSATVGVGIDGDRFAELVVDRISRL
Ga0335084_1113966023300033004SoilDVREASIEVDCSTGPSWGRTNVDWRGREHFGPPNAKVALDLDGDAFARLLIERIATLG
Ga0372943_0599397_2_1783300034268SoilEVREASIEVDCSAGPSRGRTNVDWRGREHFGAPNAKVGLDIDGERFAELIVERITSLG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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