NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F104832

Metagenome / Metatranscriptome Family F104832

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104832
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 112 residues
Representative Sequence GTSIEALIRNRRNKLWLLNYSHPDTTMGTHPWGIFLEQGDKLEPLYIFKPSASEDQYVAYFAASLDLNGDGTDELVVEASYRLGTAFKVISVSNGKYQETFTSYYRGPA
Number of Associated Samples 89
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 8.33 %
% of genes near scaffold ends (potentially truncated) 11.00 %
% of genes from short scaffolds (< 2000 bps) 11.00 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (88.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(19.000 % of family members)
Environment Ontology (ENVO) Unclassified
(37.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(64.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 50.36%    Coil/Unstructured: 49.64%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.80
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.69.8.0: Integrin alpha N-terminal domaind4wjka_4wjk0.69
b.68.2.1: Soluble quinoprotein glucose dehydrogenased1crua_1cru0.66
b.69.12.1: Sema domaind1olza21olz0.65
b.68.3.1: Thermostable phytase (3-phytase)d3amra_3amr0.65
b.70.1.0: Quinoprotein alcohol dehydrogenase-liked4cvba_4cvb0.65

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13620CarboxypepD_reg 5.00
PF00753Lactamase_B 3.00
PF027395_3_exonuc_N 3.00
PF11141DUF2914 2.00
PF013675_3_exonuc 2.00
PF02596DUF169 2.00
PF01434Peptidase_M41 1.00
PF12796Ank_2 1.00
PF01402RHH_1 1.00
PF13739PdaC 1.00
PF00076RRM_1 1.00
PF01594AI-2E_transport 1.00
PF01261AP_endonuc_2 1.00
PF08455SNF2_assoc 1.00
PF02321OEP 1.00
PF02517Rce1-like 1.00
PF07638Sigma70_ECF 1.00
PF13649Methyltransf_25 1.00
PF12704MacB_PCD 1.00
PF02687FtsX 1.00
PF13531SBP_bac_11 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 5.00
COG0553Superfamily II DNA or RNA helicase, SNF2 familyTranscription [K] 2.00
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 2.00
COG2043Uncharacterized conserved protein, DUF169 familyFunction unknown [S] 2.00
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 1.00
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 1.00
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 1.00
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.00
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A88.00 %
All OrganismsrootAll Organisms12.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005167|Ga0066672_11027138All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300006797|Ga0066659_11070095All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium674Open in IMG/M
3300006844|Ga0075428_102682240All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300010047|Ga0126382_12343998All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300010142|Ga0127483_1267285All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300010336|Ga0134071_10446254All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300010358|Ga0126370_11556303All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium631Open in IMG/M
3300010361|Ga0126378_12310099All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300010398|Ga0126383_12251288All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium631Open in IMG/M
3300011417|Ga0137326_1002888All Organisms → cellular organisms → Bacteria4507Open in IMG/M
3300012206|Ga0137380_10862773All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300018433|Ga0066667_11598897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil19.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil13.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil9.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011417Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058897_1074198223300004139Forest SoilTNAAPQRYLYGTSIEALIQNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVHKPSPSEQQYVAYFVASLDLNGDGNDELVIEASYRLGTAFKVISFDGGKLHETYTSYYRGPA
Ga0062590_10030349113300004157SoilFLYGTSIEALIRNRLGKLWLLNYSHPDTTIGTHPWGVFVESAGSLEPLYIYKPASLDNAYVAYFVAAVDLNQDGSDELIIEASYRIGTAYKVISSVGGKYQETFTSYYRGPAS*
Ga0066672_1102713813300005167SoilEDPATLPAGYEAAKELLDDKNSSPQQRFIYGTSIEALVRGRVAKLWLLNYSHPDTTMGTHPWGIFLEQSGRLEPLYINKPSVSDEQYVAYFVASLDLDGDSTDELVLEASYRLGTAFKVISASGGNYRETYTSYYRGPA*
Ga0066683_1046777023300005172SoilPAGSEAAKQLLDDSTNAAPQRFLYGTSIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYAAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDGKYRERYTSYYRGPA*
Ga0066685_1086861013300005180SoilQRFIYGTSIEALIRNRLNKLWLLNYSHPDTTMGTHPWGIFLEQGDKLEPLYIFKPSASEDQYVAYFAASLDLNGDGTDELVVEASYRLGTAFKVISVSNGKYQETFTSYYRGPA*
Ga0066678_1011736123300005181SoilDKSGDVPQRFIYGTSIEAMIRNRLSKLWLLNYSHPDTTMGTHPWGVFLEQGDKLEPLYIFKPSASDDQYVAYFAASLDLNGDGTDELVIEASYRLGTAFKVISGSNGKFQETYTSYYRGPS*
Ga0066676_1001359133300005186SoilTSIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYAAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDGKYRERYTSYYRGPA*
Ga0070711_10038644613300005439Corn, Switchgrass And Miscanthus RhizosphereEIEAMVRNKLSKLWLLNYSHPDTTIGKHPWGIFMEDGADLQPLYIFKGAASEPPYVAYLTASLDLNQDGTDELVVEASYRIGTAFKVISMVGGKYQEVFTSYYRGPS*
Ga0070700_10083209013300005441Corn, Switchgrass And Miscanthus RhizosphereDGPQRFLYGTSIEAMVKKRPAKLWLLNYSNPDTTAGRHPWGIFMEQGGELQVLYTYNPQDSRDPYVAYFTAAVDLNQDGTDELLIEASYRLGTAYKVVSSVGGKYQEIFSSYYRGPAS*
Ga0066686_10001925103300005446SoilTSIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYAAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDAKYRESYTSYYRGPA*
Ga0066686_1000970613300005446SoilSHPDTTIGRHPWGIFVEQAEGLQPLYIYKGASSDDSYVAYLTASVDLDQDGNDELVVEASYRIGTAYKIISSAGGKYQERFTSYYRGPAS*
Ga0066681_1095107813300005451SoilGTSIEALIRNRRNKLWLLNYSHPDTTMGTHPWGIFLEQGDKLEPLYIFKPSASEDQYVAYFAASLDLNGDGTDELVVEASYRLGTAFKVISVSNGKYQETFTSYYRGPA*
Ga0070672_10140050013300005543Miscanthus RhizosphereSKLWLLNYSHPDTTMGTHPWGVFVESAGSLEPLYIYKPASLDNAYVAYFVAAVDLNQDGSDELVIEASYRIGTAYKVISSVGGKYQETFTSYYRGPAS*
Ga0066707_1044028023300005556SoilNYSHPDTTIGRHPWGIFVEQAEGLQPLYIYKGASSDDSYVAYLAASVDLDQDGNDELVVEASYRIGTAYKIISSAGGKYQERFTSYYRGPAS*
Ga0066700_1096249713300005559SoilPQRFIYGTSIEATIRNRVSRLWLLNYSHPDTTMGTHPWGIFLEQGDKLEPLYIFKPSASDDQYVAYFAASLDLNGDGTDELVIEASYRLGTAFKVISGSNGKFQETYTSYYRGPS*
Ga0068857_10163756113300005577Corn RhizospherePDTTKGSHPWGIFQEDAGGLQPLYIYKPTGTGDPYVAYFTASIDLNQDGTDELVVEASYRLGTAFKVISLVGEKYQETFTSYYRGPEKR*
Ga0066691_1084773923300005586SoilLWLLNYSHPDTTKGSHPWGIFAERPGGLDPLYIFKPAKSDNDNDYVAYFTGAIDLNQDGSDELVIEASYRNGTAHKIISATGSKYAEIYTSYY
Ga0066706_1013679123300005598SoilVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYAAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDGKYRERYTSYYRGPA*
Ga0068864_10237948023300005618Switchgrass RhizosphereFLYGTSIEAMVKKRPAKLWLLNYSNPDTTAGRHPWGIFMEQGGELQVLYTYNPQDSRDPYVAYFTAAVDLNQDGTDELLIEASYRLGTAYKVVSSVGGKYQEIFSSYYRGPAS*
Ga0066905_10130375613300005713Tropical Forest SoilSDGQERFLYGTSIEALVHNRINKLWLLNYSHPDTTAGTHPWGIFLEENAGLQPLYIYKPSTPDDPYVAYFVASVDLDQDGNDELVIEASYRIGTAYKVISSSAGKYREVFTSYYRGPAS*
Ga0066903_10619615613300005764Tropical Forest SoilIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYVAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDAKYRESYTSYYRGPA*
Ga0068870_1120433623300005840Miscanthus RhizosphereKKRPAKLWLLNYSNPDTTAGRHPWGIFMEQGGELQVLYTYNPQDSRDPYVAYFTAAVDLNQDGTDELLIKASYRLGTAYKVVSSVGGKYQETFSSYYRGPAS*
Ga0066665_1102210523300006796SoilLLNYSHPDTSMGTHPWGIFQENSAGTLEPLYVYKPSPSEVQYVAYFVASVDLNGDGTDELVVEASYRLGAAFKVISFKDGKYRETYTSYYRGPA*
Ga0066659_1107009523300006797SoilLPAGSEAAKQLLDDSTNAAPQRFLYGTSIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYVAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDGKYRESYTSYYRGPA*
Ga0075428_10268224013300006844Populus RhizospherePPGYLSAKQALDDQSADASQRFIYGTSIEAVIRNRVSKLWLLNYSHPDTTVGSHPWGVFVENGGELQPLYIYKPVSSTDPFVAYLTASLDLNQDGNDELVIEASYRVGTAYKVISNVGGKYQEILTSYYRGPAS*
Ga0075421_10136531213300006845Populus RhizosphereALTHNRINKLWLLNYSHPDTTMGSHPWGIFLEENGRLQPLYIYKPSTPDDPYVAYFIASVDLDQDGNDELVVEASYRVGTSYKVISNSGGKYQEVFTSYYRGPAS*
Ga0075433_1094886923300006852Populus RhizosphereLNYSHPDTTMGTHPWGIFIEDGARLDPLYIFKPGNSGDPYVAYLVASVDLNQDGTDELLIEASYRIGTTYKVISKVGGKYQETFTSYYRGPAS*
Ga0075433_1119379213300006852Populus RhizosphereHSTGEQKRFIYGTSIEALSRNRINKLWLLNYSHPDTTLGTHPWGIFVEENGSLRPLYVHKPSDSDRAYVAYVTAAVDLDQDGSDELIVEASYRVGTAFKVISSVGGKYQEIFSSYYRGPE
Ga0075434_10264756813300006871Populus RhizosphereSDGQQRFLYGTSIEARIRNRPAKLWLLNYSHPDTTIGTHPWGIFEEKDGGLEPLFIYKPITGDPYVAYFTASIDLNQDGSDELIIEASYRVGTAFKVISNVNGKYQEIFSSYYRGPAS*
Ga0066710_10004921913300009012Grasslands SoilPAGYEAAKELLDDKNSSPQQRFIYGTSIEALVRGRVAKLWLLNYSHPDTTIGTHPWGIFLEQSGRLEPLYINKPSVSDEQYVAYFVASLDLDGDSTDELVLEASYRLGTAFKVISASGGNYRETYTSYYRGPA
Ga0066710_10054214413300009012Grasslands SoilTSIETLSRNRVSKLWLLNYSHPDTTMGTHPWGIFQENSAGTLEPLYVYKPSPSEVQYVAYFVASVDLNGDGTDELVVEASYRLGAAFKVISFKDGKYRETYTSYSRGPA
Ga0066710_10306310323300009012Grasslands SoilIRNRVCKVWLLNYSHPDTTIGTHPWGIFLEQPDGLQPLYIHKPQSNSEDPYVAYFVASLDLDGDGTDELVVEASYRIGTAYKVISSTVGKYHEIFTSYYRGPAS
Ga0099830_1133156113300009088Vadose Zone SoilAAKQLLDDSDANGPQRFLYGTSIEALIGNRVSKLWLLNYSHPDTTMGTHPWGIFIEQSEKLEPLYIYKPSSSEEQYVAYFVASLDLNGDGTDELVIEASYRLGTAFKVISASDGKYREGYTSYYRGPA*
Ga0111539_1085784923300009094Populus RhizosphereWLLNYSHPDTTIGRHPWGIFQEQAGDLKPLYIYNPPPQGAPYVAYFNAAVDLNQDGTDELLVEASYRIGTAYKVISNVGGKFQETFTSYYRGPVS*
Ga0066709_10130364923300009137Grasslands SoilERFIYGTSIEALIRGRLVKLWLLNYSHPDTTKGSHPWGIFMEQSGRLEPLFVNKPSASEEQYVAYFVASIDLDGDGTDELVLEASYRLGTAFKVISASGDGKYKEIHTSYYRGPA*
Ga0066709_10188815413300009137Grasslands SoilPAGYEAAKELLDDKNSSPQQRFIYGTSIEALVRGRVAKLWLLNYSHPDTTIGTHPWGIFLEQSGRLEPLYINKPSVSDEQYVAYFVASLDLDGDSTDELVLEASYRLGTAFKVISASGGNYRETYTSYYRGPA*
Ga0114129_1034428833300009147Populus RhizosphereTIGTHPWGIFLEENGGLVPLYIYKPTKPDDPYVAYFTAAVDLDQDGTDELVVEASYRIGTAYKVISSSGGKYQEAFTSYYRGPAS*
Ga0114129_1076665813300009147Populus RhizosphereNRINKLWLLNYSHPDTTMGSHPWGIFLEENGRLQPLYIYKPSTPDDPYVAYFIASVDLDQDGNDELVVEASYRVGTSYKVISNSGGKYQEVFTSYYRGPAS*
Ga0075423_1249710623300009162Populus RhizosphereGTTIEALVRNQPSKLWLMNYMHPDTTLGTHPWGIFVEEAGRLEPLYIFKPGNSGEPFVAYFVASVDLNQDGMDELLVEASYRVGTAYKVISIVGGKYQETFTSYYRGPAS*
Ga0105242_1207584423300009176Miscanthus RhizosphereNYSNPDTTAGRHPCGIFMEQGGELQVLYTYNPQDSRDPYVAYFTAAVDLNQDGTDELLIEASYRLGTAYKVVSSVGGKYQEIFSSYYRGPAS*
Ga0105252_1022300523300009678SoilAFPSDTARRFLYGTSIEALIRNRPIKLWLLNYSHPDTSLGNHPWGIFEESASGLRPLYVYNPPNSNDPFVAYFTASIDLDQDGVDELVVEASYRTGTAFKVIANRGGKYQEIFTSYYRGPES*
Ga0126374_1149480313300009792Tropical Forest SoilISTLWLLNYSNPDTTVGTHPWGIFLQRAGGLEPLYIYKPVDSEAPYVAYFTASLDLNQDGTDELIVEASYRIGTAYKVISSVKGKYQETFTSYYRGPEAGK*
Ga0126384_1166355323300010046Tropical Forest SoilPDTTMGTHPWGIFMEDGADLQPLYTFKGAASERPYVAYLTASLDLNQDGTDELVVEASYRIGTAFKVISMVGGKYQEIFTSYYRGP*
Ga0126382_1234399813300010047Tropical Forest SoilGYESAKQLLDDRRPDASQRFLYGTSIQATIRNRPAKLWLLNYSHPDTTIGTHPWGIFLEESGGLQPIYMYTPATSDSPYVAYFTAAVDLDQDGTDELVIEASYRIGTAYKVISSVNGKYQEIFTSYYRGPEAGK*
Ga0127483_126728513300010142Grasslands SoilMGKLVARGECGGSSGGIRSSKAAKQLLDDSTNAAPQRFLYGTSIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYVAYFVASLDLNGDGNDELVIEASYRLGTAFKVI*
Ga0134088_1000355583300010304Grasslands SoilTNAAPQRFLYGTSIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYVAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDAKYRESYTSYYRGPA
Ga0134088_1015321023300010304Grasslands SoilGTSIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYAAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDGKYRERYTSYYRGPA*
Ga0134065_1022815013300010326Grasslands SoilFIYGTSIEALIRNRRNKLWLLNYSHPDTTMGTHPWGIFLEQGDKLEPLYIFKPSASEDQYVAYFAASLDLNGDGTDELVVEASYRLGTAFKVISVSNGKYQETFRSYYRGPA*
Ga0134071_1044625413300010336Grasslands SoilPAGYEAASQLLGGDESTDQVRFLYGTSIEASVQNRSSKLWLLNYSHPDTTKGTHPWGIFAERPGGLDPLYIFKPAKSDNDYVAYFTAAVDLNQDGSDELVIEASYRNGTAYKIISATGSKYAEIYTSYYRGQ*
Ga0126370_1155630323300010358Tropical Forest SoilAGYEAAKKLLDDGKSEDQRFLFGTSIESIVRNRSSKLWLLNYSHPDTTKGSHPWGIFQEDAGALQPLYIYKPGGTEDPYVAYFTASIDLNQDGTDELIVEASYRLGTAFKVISMVGEKYQEIFTSYYRGPEHK*
Ga0126376_1014521213300010359Tropical Forest SoilAKQLLDDGTSDVQRYLYGTEIEAMVRNKLSKLWLLNYSHPDTTMGTHPWGIFMEDGADLQPLYIFKGAASEVPYVAYLTASLDLNQDGTDELVVEASYRIGTAFKVISMAGGKYQEIFTSYYRGPS*
Ga0126376_1317408113300010359Tropical Forest SoilIEALVHNRINKLWLLNYSHPDTTAGTHPWGIFLEENAGLQPLYIYKPATPDDPYVAYFVASVDLDQDGNDELVIEASYRIGTAYKVISTGAGKYREVFTSYYRGPAS*
Ga0126372_1145183023300010360Tropical Forest SoilRLTKLWLLNYSHPDTTMGSHPWGIFAEDSGALQPLFIHKPISSETAYVAYFKAALDLNQDGSDELVIEASYRLGTAYKVISGGGKYQEVFTSYYRGPAS*
Ga0126378_1231009923300010361Tropical Forest SoilEKAKQLLDDGTSDAQRYLYGTEIEAMVRNKLSKVWLLNYGHPDTTMGTHPWGIFMEDGSDLQPLYIFKGTPSEAPYVAYLTASLYLNQDGTDELVVEASYRIGTAFKVISMVGGKYQEIFTSYYRGPS*
Ga0126379_1313625613300010366Tropical Forest SoilPAGYESAKQLLDDRRSDAPQKFLYGTSIQATIRNRPAKLWLLNYSHPDTTMGTHPWGLFLEQSDKLEPLYIFKPAASDQQYVAYLVASLDLDGDGNDELVIEASYRLGTAFKVISVSDGKYRESYTSYYRGPA*
Ga0126381_10400707013300010376Tropical Forest SoilKGSHPWGIFQEAAGGLQPLYIYKPNGAEDPYVAYFTASIDLNQDGTDELVVEASYRLGTAFKVISMAGEKYQEIFTSYYRGPEKR*
Ga0126383_1225128813300010398Tropical Forest SoilYLAAKELLDDHSPDGQKQFLYGTSIEALMQNRISKLWLLNYSHPDTTIGTHPWGIFVEQNGGLQPLYIYKPSSPDDPYVAYFIASVDLDQDGNDELVLEASYRVGTAYKVISYSGGKYREVFTSYYRGPAS*
Ga0126383_1230277113300010398Tropical Forest SoilIEAMVRNKLSKLWLLNYSHPDTTMGTHPWGIFMEDGADLQPLYIFKGAASERPYVAYLTASLDLNQDGTDELVVEASYRIGTAFKVISMAGGKYQEIFTSYYRGPS*
Ga0134123_1239505113300010403Terrestrial SoilLLDDHPPEGQQRFLYGTSIEALVRNRPSTLWLLNYSHPDTTIGTHPWGVFIEEAGRLEPLYIFKPGASGEPYVAYFVASVDLNQDGTDELLVDASYRVGTAYKVISNVGGKYQETFTSYYRGPAS*
Ga0124850_100260613300010863Tropical Forest SoilNYSMTIPQDGQQRYLYGTSIEALIHNRINKLWLLNYSHPDTTMGSHPWGIFLEENGRLQPLYIYKPSTPDDPYVAYFIASVDLDQDGNDELVVEASYRVGTAYKVISNSGGKYQEVFTSYYRGPAS*
Ga0137392_1151721813300011269Vadose Zone SoilGTSIEALVRNRVSRLWLLNYSHPDTTMGTHPWGIFLEQSDRLEPLYIYKPSASDEQYVAYFVASLDLNGDGADELVIEASYRLGTAFKVISVSDGKYQESYTSYYRGPA*
Ga0137326_100288813300011417SoilDPASLPPDFESAKKLLAAFPSDTARRFLYGTSIEALIRNRPIKLWLLNYSHPDTSLGNHPWGIFEESASGLRPLYVYNPPNSNDPFVAYFTASIDLDQDGVDELVVEASYRTGTAFKVIANRGGKYQEIFTSYYRGPES*
Ga0137399_1053542323300012203Vadose Zone SoilEATDQVRFLYGTSIEASLQNRSSKLWLLNYSHPDTTKGSHPWGIFAERPGGLDPLYIFKPAKSDNDYVAYFTAAIDLNQDGSDELVIEASYRNGTAYKIISATGSKYAEIYTSYYRGQ*
Ga0137380_1014709413300012206Vadose Zone SoilRNSNAPQRFIYGTSIEALIRNRRNKLWLLNYSHPDTTMGTHPWGIFLEQGDKLEPLYIFKPSASEDQYVAYFAASLDLNGDGTDELVVEASYRLGTAFKVISVSNGKYQETFTSYYRGPA
Ga0137380_1086277323300012206Vadose Zone SoilYDTAKQLLDDHTADGQPRFLYGTAIEALVRNRSSKLWLLNYSHPDTTMGAHPWGIFVEESGRLQPLYVYKPSNTEEQYVAYFIASLDLNQDGNDELIIEASYRIGTAYKVVSFAGGKYQEIFTSYYRGPAS*
Ga0137381_1144556913300012207Vadose Zone SoilRNRRNKLWLLNYSHPDTTMGTHPWGIFLEQGDKLEPLYIFKPPASEDQYVAYFAASLDLNGDGTDELVVEASYRLGTSFKVISVSNGKYQETFTSYYRGPA*
Ga0137379_1120948013300012209Vadose Zone SoilDTAKQLLDDHTADGQLRFLYGTSIEALVRNRSSKLWLLNYSHPDTTMGAHPWGIFVEESGRLQPLYVYKPSNTEEQYVAYFIASLDLNQDGNDELIIEASYRIGTAYKVVSFAGGKYQEIFTSYFRGPAA*
Ga0137366_1103362523300012354Vadose Zone SoilGRHPWGIFREQAGDLQPLYIYNPPAQGNPYVAYFTAAVDLNHDGTDELLIEASYRIGTAYKVISSVGGKFQETFTSYYRGPVS*
Ga0137361_1047121313300012362Vadose Zone SoilSIEALVRNRSSKLWLLNYSHPDTTMGAHPWGIFVEEPGRLQPLYVYKPSNTEEQYVAYFIASLDLNQDGNDELIIEASYRIGTAYKVVSFAGGKYQEIFTSYYRGPAS*
Ga0134043_109633013300012392Grasslands SoilLDDSTNAAPQRFLYGTSIEAFIRNRVSKLWLLNYSHPDMTMVTHPWGIFLEKPDGSLESLYVHKPSPSEQQYVAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDGKYRESYTSYYRGPA*
Ga0137396_1062829623300012918Vadose Zone SoilLNYSHPDTTMGRHPWGIFLEQAGRLEPLYIYKPSASDQQYVAYFVASLDLNGDGTDELVIEASYRLGTAFKVISASDGKYRESYTSYYRGPA*
Ga0126375_1179466413300012948Tropical Forest SoilLDDNSPDGQPRFLYGTSIEALIHNRINKLWLLNYSHPDTTMGSHPWGIFLEENGRLQPLYIYKPSAPDDPYVAYFIASVDLDQDGNDELVVEASYRIGTAYKVISNRGGKYQEVFTSYYRGPAS*
Ga0164301_1189214913300012960SoilQGRLSKLWLLNYSHPDTTMGTHPWGIFVEDGGRLDPLYIFKPGNSGDPYVAYLVASVDLNQDGTDELLIEASYRIGTAYKVISNVGGKYQETFTSYYRGPAS*
Ga0134075_1000117813300014154Grasslands SoilIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYTPSRSEQQYVAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDAKYRESYTSYYRGPA*
Ga0134075_1006203923300014154Grasslands SoilIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYAAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDGKYRERYTSYYRGPA*
Ga0134078_1007352123300014157Grasslands SoilVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYAAYFVASLDLNGDGNDDLVIEASYRLGTAFKVISLSDGKYRESYTSYYRGPA*
Ga0132258_1116893113300015371Arabidopsis RhizosphereTMGTHPWGVFLEEAGGLQPLYIYKPGNSGEPYVAYFTAAVDLNQDGTDELVIEASYRIGTAYKIISYSGGKYQETFTSYYRGPAS*
Ga0132256_10269829613300015372Arabidopsis RhizosphereSIEAVVQGKLSKLWLLNYSHPDTTMGTHPWGIFIEDGARLDPLYIFKPGNSGDPYVAYLVASVDLNQDGTDELLIEASYRIGTTYKVISKVGGKYQETFTSYYRGPAS*
Ga0132255_10316824923300015374Arabidopsis RhizosphereFLYGTSIQALVKNRLSKLWLLNYSHPDTTMGTHPWGVFLEEAGGLQPLYIYKPGNSGEPYVAYFTAAVDLNQDGTDELVIEASYRIGTAYKIISYSGGKYQETFTSYYRGPAS*
Ga0182041_1221422413300016294SoilGDANSEGQRYLFGTSIEAMVRNRLSKLWLLNYSHPDTTKGSHPWGIFEEDAGGLQPLYIYKPAGTEEPYVAYATASIDLNQDGTDELVVEASYRLGTAFKVISMVDGKYQEIFTSYYRGPEKH
Ga0182034_1082263013300016371SoilRFLYGTSIEARIRNRPAKLWLLNYSHPDTTIGTHPWGIFEEKDGGLEPLYIYKPSAGDPFVAYFTASIDLNQDGSDELIIEASYRVGTAFKVISNVNGKYQEIFSSYYRGPAS
Ga0066667_1159889713300018433Grasslands SoilAGYEAVKELLDDRNSNAPQQFIYGTSIEALIRNRLNKLWLLNYSHPDTTMGTHPWGIFLEQGDKLEPLYIFKPSASEDQYVAYFAASLDLNGDGTDELVVEASYRLGTAFKVISVSNGKYQETFTSYYRGPA
Ga0210403_1118576813300020580SoilLNYSHPDTTKSSHPWGIFMEDGSDIQPLYIFKPDKTEDPYVAYFTASLDLNQDGTDELVVEASYRIGTAFKVISMAGGKFQEVFTSYYRGPS
Ga0210389_1114054223300021404SoilRYLYGTEIEAMVRNKLSKLWLLNYSHPDTTMGTHPWGIFMEDGGDLQPLYIFKGAASEAPYVAYLTASLDLNQDGTDELIVEASYRIGTAFKVISMVGGKYQEVFRSYYRGPS
Ga0207663_1081241223300025916Corn, Switchgrass And Miscanthus RhizosphereMVRNKLSKLWLLNYSHPDTTMGKHPWGIFMEDGADLQPLYIFKGAASEPPYVAYLTASLDLNQDGTDELVVEASYRIGTAFKVISMVGGKYQEVFTSYYRGPS
Ga0207674_1213963223300026116Corn RhizosphereDDGNNGDQRFLFGTSIEAMVRNRASKLWLLNYSHPDTTKGSHPWGIFQEDAGGLQPLYIYKPTGTGDPYVAYFTASIDLNQDGTDELVVEASYRLGTAFKVISLVGEKYQETFTSYYRGPEKR
Ga0209350_114566823300026277Grasslands SoilDKNSSPQQRFIYGTSIEALVRGRVAKLWLLNYSHPDTTMGTHPWGIFLEQSGRLEPLYINKPSVSDEQYVAYFVASLDLDGDSTDELVLEASYRLGTAFKVISASGGNYRETYTSYYRGP
Ga0209239_107734713300026310Grasslands SoilTLPAGYEAAKELLDDKNSSPQQRFIYGTSIEALVRGRVAKLWLLNYSHPDTTMGTHPWGIFLEQSGRLEPLYINKPSVSDEQYVAYFVASLDLDGDSTDELVLEASYRLGTAFKVISASGGNYRETYTSYYRGPA
Ga0209761_124546223300026313Grasslands SoilRNRVSKLWLLNYSHPDTTMGTHPWGMFLEQAGRLEPLYIYKPSASDQQYVAYFVASLDLNGDGTDELVIEASYRLGTAFKVISASDGKYRESYTSYYRGPA
Ga0209801_109585923300026326SoilIRNRLSKLWLLNYSHPDTTMGTHPWGVFLEQGDKLEPLYIFKPSASDDQYVAYFAASLDLNGDGTDELVIEASYRLGTAFKVISGSNGKFQETYTSYYRGPS
Ga0209266_127390823300026327SoilYSHPDTTMGTHPWGIFLEQSGRLEPLYINKPSVSDEQYVAYFVASLDLDGDSTDELVLEASYRLGTAFKVISASGGNYRETYTSYYRGPA
Ga0209057_109075223300026342SoilDKSGDVPQRFIYGTSIEAMIRNRLSKLWLLNYSHPDTTMGTHPWGVFLEQGDKLEPLYIFKPSASDDQYVAYFAASLDLNGDGTDELVIEASYRLGTAFKVISGSNGKFQETYTSYYRGP
Ga0257171_105237013300026377SoilIGTHPWGIFEERNGGLEPLYIFKPGASNDPYVAYFTASIDLNQDGSDEFIVEASYRVGTAFKVISNVNGKYQEIFSSYYRGPAT
Ga0209378_112129333300026528SoilGTSIEAFIRNRVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYAAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDGKYRESYTSYYRGPA
Ga0209056_10004984103300026538SoilVSKLWLLNYSHPDMTMGTHPWGIFLEKPDGSLESLYVYKPSPSEQQYVAYFVASLDLNGDGNDELVIEASYRLGTAFKVISLSDAKYRESYTSYYRGPA
Ga0209382_1010410613300027909Populus RhizosphereIHNRINKLWLLNYSHPDTTVGSHPWGIFLEENGRLQPLYIYKPSTPDDPYVAYFIASVDLDQDGNDELVVEASYRVGTTYKVISISGGKYQEVLTSYYRGPTS
Ga0307468_10042790833300031740Hardwood Forest SoilEALVRNRLSKLWLLNYSHPDTTKGTHPWGIFQEEAGRLQPLYLSKPMDSDDAYVAYFTASLDLNQDGNDELVVEASYRIGTAYKVISSVGGKYQDVFTSYYRGPQEQ
Ga0306923_1056111423300031910SoilEKARQLLDDGNNKNQRYLFGTSIEATIRNRMSKLWLLNYSHPDTTKGTHPWGIFVEEGSDLQPLYIFKPDATENPYVAYFTASLDLNQDGTDELVIEASYRIGTAFKVISMAGGKYQEVFSSYYRGPS
Ga0306920_10299970323300032261SoilIEALIRGRLSKLWLLNYSHPDTTIATHPWGIFLEQSGKLEPLYIYKPAATDQQYVAYFAASVDLNGDGTDELVVEASYRLGTAFKVISASDGKYQETYTSYYRGPS
Ga0310914_1180976223300033289SoilSIESLIRNRAGKLWLLNYSHPDTTVGTHPWGIFMERPDGGLESLYIYKPSASAEQYVAYFVASLDLNGDGSDELVIEASYRLGTAFKVISLSGGSYQEIYTSYYRGPA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.