NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105045

Metagenome / Metatranscriptome Family F105045

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105045
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 100 residues
Representative Sequence MSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Number of Associated Samples 81
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(28.000 % of family members)
Environment Ontology (ENVO) Unclassified
(84.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(74.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.59%    β-sheet: 37.86%    Coil/Unstructured: 48.54%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00111Fer2 46.00
PF05618Zn_protease 22.00
PF08443RimK 14.00
PF03104DNA_pol_B_exo1 6.00
PF05050Methyltransf_21 3.00
PF02675AdoMet_dc 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0417DNA polymerase B elongation subunitReplication, recombination and repair [L] 6.00
COG1586S-adenosylmethionine decarboxylaseAmino acid transport and metabolism [E] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake28.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater22.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic9.00%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface9.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater8.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater8.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.00%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton1.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003388Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300003411Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SDEnvironmentalOpen in IMG/M
3300003429Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SNEnvironmentalOpen in IMG/M
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003491Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004789Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004810Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004836Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006639Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11EnvironmentalOpen in IMG/M
3300007162Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11EnvironmentalOpen in IMG/M
3300007165Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16EnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300011011Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300011995Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013122 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3mEnvironmentalOpen in IMG/M
3300013123 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11mEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300018775Metatranscriptome of marine microbial communities from Baltic Sea - GS679_0p8EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020179Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0mEnvironmentalOpen in IMG/M
3300020204Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surfaceEnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020221Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100mEnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020524Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020527Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020530Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020532Freshwater microbial communities from Lake Mendota, WI - 09NOV2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020533Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020542Freshwater microbial communities from Lake Mendota, WI - 05NOV2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300027114Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)EnvironmentalOpen in IMG/M
3300027125Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8hEnvironmentalOpen in IMG/M
3300027375Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8dEnvironmentalOpen in IMG/M
3300027380Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series LW 2014_7_11 (SPAdes)EnvironmentalOpen in IMG/M
3300027518Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)EnvironmentalOpen in IMG/M
3300027563Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027732Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300028114 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_13.5mEnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300034019Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M
3300034092Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034110Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034119Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166EnvironmentalOpen in IMG/M
3300034166Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M
3300034284Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
B570J40625_10020525323300002835FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID*
JGI25908J49247_1003175113300003277Freshwater LakeMSEVKIFRLSTGEDVIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGI
JGI25908J49247_1010222623300003277Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID*
JGI25910J50241_1002786033300003388Freshwater LakeMSEVKIFRLSTGEDVIGLXLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID*
JGI25909J50240_111803913300003393Freshwater LakeMSEVKIFRLSTGEDVIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID*
JGI25911J50253_1019835613300003411Freshwater LakeMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQNLGTGIVQFKKPK
JGI25914J50564_1000713523300003429Freshwater LakeMSEVKIFRLSTGEDVIGLKLDSKKEQXTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID*
JGI25926J51410_104703023300003490Freshwater LakeNKGYIMSNLKIFRLSTGEDVIGQKIDNNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID*
JGI25924J51412_106045113300003491Freshwater LakeIVYNDIMSEVKIFRLSTGEDVIGLXLDSKKEQXTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID*
Ga0007752_1111700223300004789Freshwater LakeTGEDVIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID*
Ga0007757_1067398013300004810Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGII
Ga0007759_1131331513300004836Freshwater LakeIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID*
Ga0070374_1003116633300005517Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID***
Ga0070374_1004492423300005517Freshwater LakeMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQNLGTGIVQFKKPKLIID***
Ga0049083_1015011623300005580Freshwater LenticMSNLKIFRLSTGEDVIGQKIDNDNSEITEIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKIDIGNSYNQHLGSGIIQAKKPKLIID*
Ga0049081_1034116723300005581Freshwater LenticMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID***
Ga0049085_1009378133300005583Freshwater LenticKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQHLGSGIVQFKKPKLIID*
Ga0049082_1008811133300005584Freshwater LenticMSNLKIFRLSTGEDVIGQKIDNDNSEITEIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKIDIGNSYNQHLGSGIIQAKKPKLIID***
Ga0049082_1013438733300005584Freshwater LenticLSTGEDVIGQKLENNNIESTQIKQPFVIVPMQSKPGGPISLALTPYSPYSVEDTVIIKNNNIVTEVSPKVDIKNSYNQHLGAGIIEVKKPKLIID*
Ga0079957_117617823300005805LakeMSEVKIFRLSTGEDVIGLKLESKKEEHTTIKQAFVIVPMQSNPGGPVSLALTPYMPYAEDEVLNIKSINIIAEVEPKTEIRNSYNQHLGTGIVQFKKPKLIVD*
Ga0079957_117989913300005805LakeEYIMSDLKIFRLSTGEDVIGVKQDTSNTETLDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRHNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID*
Ga0079301_105989223300006639Deep SubsurfaceMSDLKIFRLSTGEDVIGVKQDTSNTEVADIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDVVSIKRYNIVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID***
Ga0079301_111224233300006639Deep SubsurfaceQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDVVSIKRHNIVAEVNPKTEIGNSYNQHLGTGIIEVKKPKLIID*
Ga0079300_1001584643300007162Deep SubsurfaceMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDVVSIKRHNIVAEVNPKTEIGNSYNQHLGTGIIEVKKPKLIID*
Ga0079300_1007899823300007162Deep SubsurfaceMSDLKIFRLTTGEDVIGIKQDTSNTEVVDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID*
Ga0079302_101976323300007165Deep SubsurfaceMSDLKIFRLSTGEDVIGVKQDTSNTEVADIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDVVSIKRYNIVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID*
Ga0114364_109911213300008267Freshwater, PlanktonMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQNLGTGIVQFKKPKLIID*
Ga0114980_1007501913300009152Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID*
Ga0114980_1017155023300009152Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDIVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID*
Ga0139556_101501923300011011FreshwaterMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILNIKSNNIVAEVEPKTDIKNSYNQNLGTGIVQFKKPKLIID*
Ga0153800_100004993300011995FreshwaterMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQHLGSGIVQFKKPKLIID*
Ga0164293_1030273023300013004FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVADIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKSNIVAEVTPKIEIGNSYNQHLGTGIIEVKKPKLIID*
Ga0164293_1083550013300013004FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSETTEIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVTPKIEIGNSYNQHLGTGIIEVKKPKLII
Ga0164292_1008866133300013005FreshwaterKGYIMSNLKIFRLSTGEDVIGQKIDNNNSEVADIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKSNIVAEVTPKIEIGNSYNQHLGTGIIEVKKPKLIID*
(restricted) Ga0172374_111936923300013122FreshwaterMSDLKIFRLTTGEDVIGIKQDTSNTEVVDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKTKLIID*
(restricted) Ga0172368_1012074523300013123FreshwaterMSDLKIFRLSTGEDVIGVKQESSNTEVVDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID*
Ga0181362_110348413300017723Freshwater LakeMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQNLGTGIVQFKKPKLII
Ga0181358_107910333300017774Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQ
Ga0181358_122429613300017774Freshwater LakeKIFRLSTGEDVIGQKLENNNTESTQIKQPFVIVPMQSKPGGPISLALTPYSPYADEDTVIIKNNNIVTEVNPKVDIKNSYNQHLGAGIIEVKKPKLIID
Ga0181358_128806923300017774Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNS
Ga0181357_127291613300017777Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNDNSEITEIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIIDXX
Ga0181349_108626713300017778Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQSNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIIDX
Ga0169931_1054433923300017788FreshwaterMSDLKIFRLSTGEDVIGVKQESSNTEVVDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPK
Ga0188848_102077313300018775Freshwater LakeMSDLKIFRLSTGEDVIGVKQDTSNEETIDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVSPKTEIGNSYRQ
Ga0181359_104069513300019784Freshwater LakeMSEVKIFRLSTGEDVIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID
Ga0181359_106934513300019784Freshwater LakeMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQNLGTGIVQFKKPKLIID
Ga0194113_1084165823300020074Freshwater LakeMSDLKIFRLSTGEDVIGVKKDTSNAEFTDIKQPFVIVPMQSKPGGPVSLALTPYLPYAEEDVVSIKKHNIIAEVNPKTDIGNSYHQHLGTGILQFKKPKLIVDXX
Ga0194110_1058945623300020084Freshwater LakeMSDLKIFRLSTGEDVIGVKKDTSNAEFTDIKQPFVIVPMQSKPGGPVSLALTPYLPYAEEDVVSIKKHNIIAEVNPKTDIGNSYHQHLGTGILQFKKPKLIVD
Ga0211736_1048439823300020151FreshwaterMSDLKIFRLTTGEDVIGVKQDTSNTEVVDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID
Ga0211734_1054181013300020159FreshwaterMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTEIKNSYNQNLGTGIVQFKKPKLIID
Ga0211726_1016756223300020161FreshwaterMSDLKIFRLSTGEDVIGIKQDTSNTEATDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRHNIVAEVSPKTEIGNSYHQHLGTGIVQFKKPKLIID
Ga0211735_1060534623300020162FreshwaterMSDLKIFRLSTGEDVIGIKQDTSNTETLDIKQPFIIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID
Ga0211729_1073666633300020172FreshwaterDVIGIKQDTSNTEATDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRHNIVAEVSPKTEIGNSYHQHLGTGIVQFKKPKLIID
Ga0194134_1005692813300020179Freshwater LakeMSDLKIFRLTTGEDVIGIKQDTCNTEVIDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID
Ga0194134_1007051413300020179Freshwater LakeYIMSDLKIFRLSTGEDVIGVKKDTSNAEFTDIKQPFVIVPMQSKPGGPVSLALTPYLPYAEEDVVSIKKHNIIAEVNPKTDIGNSYHQHLGTGILQFKKPKLIVD
Ga0194116_1038895823300020204Freshwater LakeMSDLKIFRLTTGEDVIGIKQDTCNTEVIDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIIDXW
Ga0211731_1099519723300020205FreshwaterMSDLKIFRLSTGEDVIGIKQDTSNTEATDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRHNIVAEVSPKTEIGNSYHQHLGTGIVQFKKPKLIIDXX
Ga0194127_1016810523300020221Freshwater LakeMSDLKIFRLTTGEDVIGIKQDTCNTEVIDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIIDXWF
Ga0208091_100178343300020506FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0208858_102208623300020524FreshwaterMSNLKIFRLSTGEDVIGQKIDSNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQNNIVAEVNPKTEIGNSYNQHLGSGI
Ga0208232_100875523300020527FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIIDXX
Ga0208235_100070093300020530FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0208601_101538433300020532FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIIDXX
Ga0208364_100918623300020533FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIIDXX
Ga0208857_100535423300020542FreshwaterMSNLKIFRLSTGEDVIGQKIDSNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0222713_1052435213300021962Estuarine WaterMSDLKIFRLSTGEDVIGVKQDTSNTETLDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID
Ga0181354_103178513300022190Freshwater LakeMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQNLGTGIVQFKKPKLIIDXX
Ga0181354_117020823300022190Freshwater LakeYNDIMSEVKIFRLSTGEDVIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID
Ga0181351_111643823300022407Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQSNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0208009_100633543300027114Deep SubsurfaceMSDLKIFRLSTGEDVIGVKQDTSNTEVADIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDVVSIKRYNIVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID
Ga0255106_102377623300027125FreshwaterMSEVKIFRLSTGEDVIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIIDXX
Ga0255137_103807213300027375FreshwaterMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQHLGSGIVQFKKPKLIIDXX
Ga0208432_102033213300027380Deep SubsurfaceFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0208787_100580673300027518Deep SubsurfaceMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDVVSIKRHNIVAEVNPKTEIGNSYNQHLGTGIIEVKKPKLIID
Ga0208787_106281723300027518Deep SubsurfaceMSDLKIFRLTTGEDVIGIKQDTSNTEVVDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID
Ga0209552_118339913300027563Freshwater LakeIVYNDIMSEVKIFRLSTGEDVIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIVQFKKPKLIID
Ga0208966_113914123300027586Freshwater LenticMSNLKIFRLSTGEDVIGQKIDNDNSEITEIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKIDIGNSYNQHLGSGIIQAKKPKLIID
Ga0208974_104270233300027608Freshwater LenticMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQHLGSGIVQFKKPKLIID
Ga0208974_111249323300027608Freshwater LenticMSNLKIFRLSTGEDVIGQKIDNNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0208975_102077813300027659Freshwater LenticMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQ
Ga0209442_125661313300027732Freshwater LakeMSNLKIFRLSTGEDVIGQKIDNDNSEITEIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKIDIGNSYNQHLGSGIIQAKKPKLIIDXX
Ga0209354_1031022923300027808Freshwater LakeDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQSNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
(restricted) Ga0247835_125367213300028114FreshwaterTGEDVIGIKQDTSNTEVVDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIID
(restricted) Ga0247843_102942843300028569FreshwaterMAEVKIFRLSTGEDVIGQKTEDSDSNLTHIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEEIIVLKTNNIVTEVDPKLEIKNSYNQHLGAGIVQLKKPKLIID
(restricted) Ga0247843_117101013300028569FreshwaterMSDLKIFRLSTGEDVIGIKQDTSNTETLDIKQPFIIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKRNNVVAEVNPKTEIGNSYHQHLGTGIVQFKKPKLIIDXX
Ga0315909_10014418103300031857FreshwaterMSEVKIFRLSTGEDVIGLKLESKKEEHTTIKQAFVIVPMQSNPGGPVSLALTPYMPYAEDEVLNIKSINIIAEVEPKTEIRNSYNQHLGTGIVQFKKPKLIVD
Ga0315909_1082671923300031857FreshwaterMSDLKIFRLTTGEDVIGVKQDTSNTEVVDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDVVSIKRHNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0334998_0311560_448_7593300034019FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKHNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0334987_0402047_294_6053300034061FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVADIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKSNIVAEVTPKIEIGNSYNQHLGTGIIEVKKPKLIID
Ga0334987_0678345_311_5923300034061FreshwaterTGEDVIGLKLDSKKEQHTTIKQAFVIVPMQSQPGGPVSLALTPYMPYAEDEILNIKTINIVAEVDPKTEIRNSYNQHLGSGIIQAKKPKLIID
Ga0335020_0208692_2_2683300034082FreshwaterIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0335010_0150449_1196_14743300034092FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSETTEIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKQNNIVAEVNPKTEIGNSYNQHLGSGII
Ga0335036_0249086_922_12033300034106FreshwaterTGEDVIGQKIDNNNSEVADIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKSNIVAEVTPKIEIGNSYNQHLGTGIIEVKKPKLIID
Ga0335036_0667464_1_2553300034106FreshwaterIDNNNLEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0335055_0086987_1177_14313300034110FreshwaterMSNLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDVVSIKRHNIVAEVNPKTEIGNSYH
Ga0335066_0483469_2_2683300034112FreshwaterIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKHNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0335054_0790076_3_3053300034119FreshwaterLKIFRLSTGEDVIGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID
Ga0335016_0557904_337_6333300034166FreshwaterIFRLSTGEDVIGQKLENNNTESTQIKQPFVIVPMQSKPGGPISLALTPYSPYAEEDTVTIKNNNIVTEVNPKVDIKNSYNQHLGAGIIEVKKPKLIID
Ga0335007_0256361_2_2863300034283FreshwaterMSEVKIFRLSTGEDVIGQKIDPKKEEHTTIKQAFVIVPMQSKPGGPVSLALTPYMPYAEEEILHIKSNNIVAEVEPKTDIKNSYNQNLGTGIVQF
Ga0335013_0347277_666_9293300034284FreshwaterGQKIDNNNSEVTDIKQPFVIVPMQSKPGGPVSLALTPYMPYAEEDTVSIKKNNIVAEVNPKTEIGNSYNQHLGSGIIQAKKPKLIID

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.