Metagenome / Metatranscriptome Family F105313

Basic Information
Family ID	F105313
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	112 residues
Representative Sequence	PVYAARSTLEVKMRRLLVGHGIEDFVREFPLEWNGRTYLFDFAFERERTILETNGRRWHDDAADYEGNNDKGSVPGHHGYRIVFATWDKVTRRPAELLRELAATMSA
Number of Associated Samples	88
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.000 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.37% β-sheet: 20.00% Coil/Unstructured: 49.63%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
c.52.1.26: Hypothetical protein VC1899	d1xmxa1	1xmx	0.69776
c.52.1.7: Cfr10I/Bse634I	d1knva_	1knv	0.68218
c.52.1.15: Very short patch repair (VSR) endonuclease	d1vsra_	1vsr	0.68175
c.37.1.8: G proteins	d2cxxa1	2cxx	0.66787
c.52.1.11: Restriction endonuclease BsobI	d1dc1a_	1dc1	0.66613

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02861	Clp_N	7.00
PF13577	SnoaL_4	6.00
PF06441	EHN	5.00
PF13193	AMP-binding_C	4.00
PF00275	EPSP_synthase	3.00
PF02673	BacA	3.00
PF04909	Amidohydro_2	3.00
PF06055	ExoD	2.00
PF00378	ECH_1	2.00
PF00528	BPD_transp_1	2.00
PF00990	GGDEF	2.00
PF07366	SnoaL	2.00
PF00106	adh_short	1.00
PF14226	DIOX_N	1.00
PF03308	MeaB	1.00
PF00175	NAD_binding_1	1.00
PF00440	TetR_N	1.00
PF00903	Glyoxalase	1.00
PF02570	CbiC	1.00
PF04480	DUF559	1.00
PF00005	ABC_tran	1.00
PF00248	Aldo_ket_red	1.00
PF05592	Bac_rhamnosid	1.00
PF12681	Glyoxalase_2	1.00
PF13469	Sulfotransfer_3	1.00
PF03171	2OG-FeII_Oxy	1.00
PF00291	PALP	1.00
PF00441	Acyl-CoA_dh_1	1.00
PF13231	PMT_2	1.00
PF13343	SBP_bac_6	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	7.00
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	5.00
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	3.00
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	2.00
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.00
COG2082	Precorrin-8X methylmutase CbiC/CobH	Coenzyme transport and metabolism [H]	1.00
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	1.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.00%
Host-Associated	Host-Associated	27.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.00%
Plants	Host-Associated → Plants	27.00%
Aquatic	Environmental → Aquatic	7.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.00%
Freshwater	Environmental → Aquatic → Freshwater	4.00%
Sediment	Environmental → Aquatic → Sediment	3.00%
Peat	Environmental → Terrestrial → Peat	3.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.00%
Loam	Environmental → Terrestrial → Soil → Loam	8.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.00%
Lake	Environmental → Aquatic → Freshwater → Lake	2.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.00%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.00%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.00%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.00%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.00%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.00%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.00%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.00%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300022171	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026057	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1041810261	3300000364	Soil	NYARGGQRGVAAMRTLLGVLDAVHASRSTLEVKTRRLLVAHGLGDFVREHPLTWTGRTYRFDFTFPNRRTILETNGRRWHDDPNDFEHDQEKWSVPGRHGYKLVLATWDKVTRSPGTLIDELRTTLAA*
INPhiseqgaiiFebDRAFT_1054838402	3300000364	Soil	RLLQELDPTYPSRSXLEVKTRXLLVATGHTGFVREFPLEWKRRTYLFDFAFEREKTILEVNGRRWHDDSSDYEHDNDKWSVPGRHGXRIVFATWKKVTQNADALLQELDATFARA*
INPhiseqgaiiFebDRAFT_1055923392	3300000364	Soil	LDPRHPSRSTLEVKTRRFLVAFGITGFVREFPLEWKGRTHRFDFAFPDGTTILETNGRRWHDDPADYEDDHEKWSVPGRHGYRLVLATWNKVTRQPDDLIHELLATMSAPR*
JGI10216J12902_1072110722	3300000956	Soil	LLAALDPIHPAASALEVKTRRLLVANDLTGFVREFPLVWNGRTYRYDFCFDRQRTILETNGRRWHDDAANYEHDNEKWSVPGRLGYRIVFATWDKVAHNGHALLHELAATLAA*
C688J35102_1185874521	3300002568	Soil	MTRRSAPRCTPTSIGSEHLDDRALRRCGALLGELDPKHPSRSTLEVLTRRLLVAHGITEFTREFPLAWMGRTYLFDFAFERQRTILETNGRRWHDDPADYEDDHEKWSVPGRHGYRLVFATWDKVTRRQREFLGELVATLEQRPAG*
C688J35102_1191815881	3300002568	Soil	RRLLVAHRMTDFVREFPLDWNGRTYCFDFAFPAERTILETNGRRWHDDPADYEDDHEKWSVPGRHDYRIVFATWDKVTQHPEALIDELLATLSPRERLAGSAGW*
JGI25406J46586_101714871	3300003203	Tabebuia Heterophylla Rhizosphere	ANDIDDFVREFPLIWSGRTYRYDFALPDRRVILETNGRRWHDDASDYEYDNEKWSVPARHGYRIVFATWDKVTRRPQQLITELTATLAA*
Ga0062594_1013083781	3300005093	Soil	PGRHGVAALRRLLRELDPKHPSRSTLEVLTRRLLVANRITGFTREFPIEWGGRTHRFDFAFERQQTILETNGRRWHDDPADYEDDHEKWSVPGRFGYRLVLATWDKVTRRPHEFLGELVATLEQRPSRLT*
Ga0062594_1019752892	3300005093	Soil	LEVKTRRLLAAPGITDFVREFPLDGNGRTYFFDFAFEADRTILETNGRRWHDDPADYEHDHEKWSVPGRHGYKLVLATWNKVTKRPDALVAELRATRAARYERLPR*
Ga0070690_1006026392	3300005330	Switchgrass Rhizosphere	TRRLLVAHGLADFDRDFPLDWQGRTYWFDFAFPASRTILETNGRRWHDDPADYEGDNEKWSVPGRYGYKLVLATWDKVTRHGTQLIEELDITLAA*
Ga0066388_1000453502	3300005332	Tropical Forest Soil	MRNLLDQLDPVHAARSTLEVKTRRLLVANRITNFVREYPLEWNGRRHLFDFAFERERTILETNGRRWHDDPADYEDGNDKWSVPGRHGYRIVFATWDKITCSPGEFIHELIATMTA*
Ga0066388_1033234912	3300005332	Tropical Forest Soil	GSTPCAEVQPLLDFRRLPRPLPASTLRTLLSELDPVHPSYSTLEVKTRRLIVAHGIRDFTREHPLAWNGRTYRFDFTFLGRRTILETNGRRWHDDANDFEHDQEKWSVRGRHGYKLVLATWEKVTKHPRALVEGIRTTLAA*
Ga0070673_1011893751	3300005364	Switchgrass Rhizosphere	TDFVREFPLDGNGRTYFFDFAFEADRTILETNGRRWHDDPADYEHDHEKWSVPGRHGYKLVLATWNKVTKRPDALVAELRTTRAARYERLPG*
Ga0070659_1017016932	3300005366	Corn Rhizosphere	LLAANGIDDFVREFRLEWNGRTYRYDFAFPTARTILETNGRRWHDDPADYEDDNEKWSVPGRHGYRLVFATWEKVTKTPDELARELAATLTAR*
Ga0070714_1019566161	3300005435	Agricultural Soil	HPSRSTLEVKTRRLLVARGLTTFTRELPLDWDGRTYRFDFAFERERTILETNGRKWHDDPIDYERDNEKWSVPGRHGYRLVLATWTKVTRDPDALVRAITATLAG*
Ga0070705_1013194671	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RLLDQLDPSHASRSTLEVKTRRLLAAPGITDFVREFPLDGNGRTYFFDFAFEADRTILETNGRRWHDDPADYEHDHEKWSVPGRHGYKLVLATWNKVTKRPDALVAELRATRAARYERLPR*
Ga0070678_1015420262	3300005456	Miscanthus Rhizosphere	GRHGVAALRRLLRELDPKHPSRSTLEVLTRRLLVANRITGFTREFPIEWGGRTHRFDFAFERQQTILETNGRRWHDDPADYEDDHEKWSVPGRFGYRLVLATWDKVTRRPHEFLGELVATLEQRPSRLT*
Ga0070662_1019988391	3300005457	Corn Rhizosphere	LEVKTRRLLVARGITGFTREFPLAWNGVTFHFDFAFAPRRTILETNGRRWHDDPADYEHDHEKWSVPGRHGYKLVLATWNKVTKRPDALVAELRATRAARYERLPR*
Ga0070672_1003520662	3300005543	Miscanthus Rhizosphere	EVLTRRLLVANRITGFTREFPIEWGGRTHRFDFAFERQQTILETNGRRWHDDPADHKITRRPHEFLGELVATLEQRPSRLT*
Ga0066654_108338561	3300005587	Soil	PGVAPMRRLLDQLDPVHPARSTLEVKTRRLLVAHGITDFVREFPLEWNGRAYRFDFAFERERTIVETNGRRWHDDASDYERDNEKWSVPGRHGYRMVFATWDKVVQQPTQFVDELTTTLRRVVPSGDRAPSRPRCS*
Ga0070740_101480791	3300005607	Surface Soil	RRLLVAHGLTNFVRELPLTWNGRTYRYDFAFPHQRVILETNGRRWHDDPRDYERDNERWSVPGRHGFRLVLATWSKVTEQPAALLRELTATMAA*
Ga0068860_1027832252	3300005843	Switchgrass Rhizosphere	TSVPALRAYLDRYGKRGRPGVATMRRLLDQLDPSHPSRSTLEVKTRRLLVARGITDFVREFPLDGNGRTYFFDFAFEADRTILETNGRRWHDDPADYEHDHEKWSVPGRHGYRLVLATWQKVTRAPDALLDELVATMSAR*
Ga0075291_10349731	3300005884	Rice Paddy Soil	KSTLEVKTRRLLVAAGFGDFVREFPLAWGGRTHCFDFAFELHRTILETNGRRWHDDPSDYEDDNEKWSVPGRHGYRLVFATWKKVTERPDELLAELATTAHGVAFVA*
Ga0075021_102463622	3300006354	Watersheds	PVHPARSTLEVKTRRLLAAHQITGFVREYPLHWKGRTYCFDFAFPRSKTILETNGRRWHDDVTDLEYDNEKWSIPGRHGYRIVLATWRRVTRDPAAFVSGLAVTLAG*
Ga0066665_108194762	3300006796	Soil	GALRDLLRELDPTHAARSTLEVKTRRLLVANGFTQFVREFPLEWRGRTYFFDFAFESKRTILETNGRRWHDDSTDYERSNEKWSVPGRHGYRIVFATWKKVTRHPGHLVHELAATMEAA*
Ga0079221_107521422	3300006804	Agricultural Soil	GVAATRALLSELDPVHAARSVLEVKTRRLLVAHGLTNFVRELPLVWNGRTYRYDFGFQRERTILETNGRRWHHDAADYEHDNEKWSVPALHGFRLVLATWDKVARRPGELVAELRAALAAGARNDR*
Ga0075431_1017176182	3300006847	Populus Rhizosphere	VKLEVKTRRLLVANGFGGFTRELPLEANGRTYHFDFAFEQRLIIETNGRRWHDDPSDDEHDNEKWSVPARHRFRIVFATWLKVTERPDELLRELVAALAA*
Ga0075425_1004011833	3300006854	Populus Rhizosphere	VSKRRWFDSRTRPTSISAMDSYLARHARPGQRGVARIRALTAQLDPAHPSRSTLEVKARRLLVSRGLADFVREYPLAANRRTYHFDFAFVARRTSLETGRRWHDDGADYEHDNEKWSVPAGEKVTKRPDDLCRELLTTLAA*
Ga0075424_1008291113	3300006904	Populus Rhizosphere	LMSRGLTDFVREYPLVANGRTYHFDFAFVGRRTILETNGRRWHDDAADYEHDNEKWSLPGRYGFKLVLATWEKVTKRPDDLCGELRTTLAA*
Ga0075435_1014779892	3300007076	Populus Rhizosphere	MKAYLDRHARPGQRGVARIRALTAELDPAHPSRSTLEVKARRLLMSRGLTDFVREYPLVANGRTYHFDFAFVGRRTILETNGRRWHDDAADYEHDNEKWSLPGRYGFKLVLATWEKVTKRPDDLCGEL
Ga0066710_10000271114	3300009012	Grasslands Soil	VKARRLFVANGVTNFVREFPRKWNGTTYRYDFAFPTTRTIVETNGRRWHDDPLDYEHDNEKWSVPGRYGYRIVLATWAKVTERPGELLRDVAA
Ga0066710_1011955063	3300009012	Grasslands Soil	RPGQRGLTRIRLLTAQLDPVHPSRSTLEVKARRLLMSRGLTDFVREFPLVANGRTYHFDFAFVAGRTILETNGRRWHDDTTDYEYDNEKCSVPGRFGFKLVLATWEKVTKRPDDLCGELLTTLAA
Ga0111539_132482772	3300009094	Populus Rhizosphere	MRRLLDQLDPKHPSRSTLEVKTRRLLVGHGITDFAREFPLDWNGRTYRFDFAFEAERTILETNGRRWHDDPADYEDDHEKWSVPGRHGYLLVLATWDKVTKHPIELLEELATTRRSAATAA*
Ga0105247_111824932	3300009101	Switchgrass Rhizosphere	AATRRLLAELDPAHPANSTLEVKTRRLLVTHGITNFVREFALDWNGCTYRYDFAFPHANTILETNGRRWHDDATDYEHDHEKWSVPGRHGYRLVLATWQKVTRAPDALLDELVATMSAR*
Ga0066709_1000771923	3300009137	Grasslands Soil	VKARRLFVANGVTNFVREFPRKWNGTTYRYDFAFPTTRTIVETNGRRWHDDPLDYEHDNEKWSVPGRYGYRIVLATWAKVTERPGELLRDVAA*
Ga0066709_1008626423	3300009137	Grasslands Soil	ALRELLRELDPTHAARSTLEVKTRRLLVANGFTGFVREFPLEWRGRTYFFDFAFETKRTILETNGRRWHDDSTDYERSNEKWSVPGRHGYRIVFATWKKVTRHPGHLVHELAATMEAA*
Ga0105242_100913981	3300009176	Miscanthus Rhizosphere	SGRAGAAPVRALLDQLDPRHPARSTLEVKTRRLLSANGITDYVRESPLAWEGRQYHYDFGFEHSRVILETNGRRWHDDPADYERDNEKWSVPGRHGYKLVLATWDKVVRRPDDHIEELRATLAA*
Ga0126313_101740292	3300009840	Serpentine Soil	LVAHGFTDFVRELPLEWNGRTYRFDFAFPPQKTILETNGRRWHDDARDYEYDNEKWSIPGRHGYRLVLATWEKVTRRPDDLLHELAATMAAR*
Ga0126311_115722551	3300010045	Serpentine Soil	MRALLDELDPVHAANSTLEVKARRLLVAHGFTNFVRELPLEWNGRTYRFDFAFPPQKTILETNGRRWHDDARDYEYDNEKWSIPGRHGYRLVLATWEKVTRRPDDLLHELAATMAAR*
Ga0134064_102621151	3300010325	Grasslands Soil	RSTLEVKTRRLLVARGLTAFTRELPLEGDGRTYRFDFAFERERTILETNGRKWHDDPTDYENDNEKWSVPGRHGYRLVLVTWAKVTRDPDSLVRAITATLAA*
Ga0126379_130238432	3300010366	Tropical Forest Soil	VARIRALTAQLDPAHPSRSTLEVKTRRLLTAAGLTDFVREYALAANGRTYQFDFAFLGGRTILETNGRRWHDDATDYEHDNEKWSVPGRFGFKLVLATWEKVTQRPDDLVGELATTLAA*
Ga0134128_128336131	3300010373	Terrestrial Soil	TRRLLVAGGLTNFVREFPLQWNGRTYRFDFAFERQCTILETNGRRWHDDTTDYEHDNEKWSVPGRLGYRIVFATWNKATREPHRLLAEIATTLAA*
Ga0126383_109613541	3300010398	Tropical Forest Soil	QLDPVHAARSTLEVKTRRLLVAHRITNFVREFPLEWDGRRHLFDFAFERERTILETNGRRWHDDPADYEDGNDKWSVPGRHGYRIVFATWDKVTRTSDEFIRELVATLRA*
Ga0134122_131946762	3300010400	Terrestrial Soil	GFTDFAREFRLDWNGRSYRFDFAFVAQKTILETNGRRWHDDATDYEHDHEKWSVPGRCGYRLIFATWDSVTRRPQEFLRDVAASLAA*
Ga0134121_130785172	3300010401	Terrestrial Soil	ALRAALRELDPVHPSRSTLEVKTRRLLVARGLTTFTRELPLDWNGRTYRFDFAFERERTILETNGRKWHDDPTDFDRDNEKWSVPGHHGYRLVMATWTKVTREPDALVRDLTATLVA*
Ga0137376_109410242	3300012208	Vadose Zone Soil	AHGITDFVRELPLAWNGRTYRYDFGFERQRTILETNGRRWHDDPSDYEHDNEKWSVPGRHGYRIVFATWDKVTRHPRQLLHELTASSSHALVG*
Ga0137378_118827821	3300012210	Vadose Zone Soil	YLAKFGRPGRPGVQRLRQLLSEIDATHPSRSTLEVKTRRLLVAHGLTDFVREFPLEWEGRRYLYDFAFVDRETILETNGRRWHHDVDYEGDNEKWSVPGRHGYRIVLATWDKVVNDPDRFLRELGATLARVSRREQRGRAGIRGGQ*
Ga0137377_117774161	3300012211	Vadose Zone Soil	LEVKTRRLLVAHGITDFVRELPLAWNGRTYRYDFGFERQRTILETNGRRWHDDPSDYEHDNEKWSVPGRHGYRIVFATWDKITRRPLQLL
Ga0137394_112181562	3300012922	Vadose Zone Soil	LDQLDPVYPSRSTLEVKTRRLLVANGITEFVREMPLEWNGRTYRFDFGFGRRTTILETNGRRWHDDPADYEDDNEKWSVPGRHGYRLVFATWNKVTCHPDELIRELQTTFASGGKVPVAQGGKGRGR*
Ga0137413_113798062	3300012924	Vadose Zone Soil	RQLLDELDAVHAARSTLEVKTRRLLVAHGLNGFVRVFPLSWDGRTYLFDYAFPANRVILETNGRRWHDDATDYEHDHEKWSVPARHGYRIVFATWEKVTREPARLLAELTATLACQRPQVREQPDHEAGERDSRDGHE*
Ga0137407_107901612	3300012930	Vadose Zone Soil	DFEREFPLTWRGRVHRFDFGFARARTILETNGRRWHDDPNDYEHDNEKWSVPGRLGYRLVFATWNKVTRCPQPLIEELVETLRWSEAPLAPARLAPP*
Ga0164309_110528682	3300012984	Soil	VHPSRSTLEVLTRRLLVANRVTGFVREFPLTWHGTTYRYDFAFERTRTILETNGRRWHDDATDYEYDQEKWSVPGRCGYRLIFATWDGVTRHPEAFLRDVAAS*
Ga0164309_110582501	3300012984	Soil	ARGITDFVREFPLDGNGRTYFFDFAFEADRTILETNGRRWHDDPADYEHDHEKWSVPGRHGYKLVLATWNKVTKRPDALVAELRATRAARYERLPR*
Ga0157378_117845371	3300013297	Miscanthus Rhizosphere	RSTLEVKTRRLLAANGITDYVRESPLAWEGREYHYDFGFEHSRVILETNGRRWHDDPADYERDNEKWSVPGRHGYKLVLATWDKVVRRPDDLIEELRATLAA*
Ga0157375_126067011	3300013308	Miscanthus Rhizosphere	LLVANRITGFTREFPIEWGGRTHRFDFAFERQQTILETNGRRWHDDPADHKITRRPHEFLGELVATLEQRPSRLT*
Ga0075355_10060361	3300014322	Natural And Restored Wetlands	RDLLAELDPKHPARSVLEVKTRRLLVAAGLTDFVREFPLAWHGRTYRFDFAFARRRTILETNGRRWHDDAKDYEHDNEKWSVPGRHGYRIVLATWEKITRDPNRLLGELTSTLAAAS*
Ga0157380_134154661	3300014326	Switchgrass Rhizosphere	FVREFPLAWNGRTYHFDFAYPDERTILETNGRRWHDDPADYEDDHEKWSVPGRHQYRIVFATWHKVTKQPAALIEELEATRCPRSATALVPSATLPR*
Ga0182034_120545421	3300016371	Soil	VASMRRLLDQLDPVYAARSTLEVKMRRLLVGHGIEDFVREFPLEWNGRTYLFDFAFERERTILETNGRRWHDDAADYEGNNDKGSVPGHHGYRIVFATWDKVTRRPAELLRELAATMSA
Ga0187779_107126601	3300017959	Tropical Peatland	KGVPGVAAFRTLLTELDPVHPSRSTLEVRARRLLVANGITDFVREFRLDWNGRKYRFDFAFPPRRTILETNGRRWHDDPADYEDDHEKWSVPGRYGFKLVFATWDKVVRRGGELIAELDGTLAA
Ga0187777_104308372	3300017974	Tropical Peatland	LEVKTRRLLVERGLVDFVREYPLAWNGRTYHFDFAFPVHRTILETNGRRWHDDASDYEHDNEKWSVPGRHGFKLVLATWDTVKTRPDRLVADLLTTRAA
Ga0187765_112354501	3300018060	Tropical Peatland	AYLSRFGRRGRPGVATTRQLLDELDPVYAARSTLEVRTRRLLVAHGLTDFVRELPLEWGARTYHYDFAFEGSRTILETNGRRWHDDPNDYEHDHEKWSVPRRYGYRLVFATYDKVTRTPRDLLHELTTTMSATR
Ga0173481_104703992	3300019356	Soil	YLDRFAVAGRPGVTALRGLLRELDPKHPSRSTLEVLTRRLLVAHGIKGFTREFPLVWNGRTHYFDFAFEQQRTILETNGRRWHDDPADYEEDNEKWSVPGRHGYFLVLATWDKVTRRERDFLAELVATLEQE
Ga0194113_108771972	3300020074	Freshwater Lake	LDSTLEVKTRRLLVAHGLAGFTRELPLDWNGRTDRYDFAFAGQRTMLETNGCRWHHDPTDDERDQAKRSVPARHGFRLVFATRETVTRRPGALIAELRAALAA
Ga0194110_104158641	3300020084	Freshwater Lake	HPARSRLEVLTRRVLVAHGLTDFVRELPLTWNGRTYRYDFAFPARRTILEINGRRWHDDASDYERGQEKWSVPGRFGYRLVFATWDKVTRAPGALIQELAATLAA
Ga0213857_10084401	3300022171	Watersheds	AELDPKHPARSTLEVKARRLLMANGITHFTREFPLEWRGRTYRFDFAFERERTILETNGRRWHDDATDYEYDNEKWSVPGHHGYRLVMATWSKVTRYPDRLIQDIAETMAA
Ga0207688_105676733	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLLDQLDPTHPSRSTLEVKTRRLLVAHGITDFVREFPLGWNGRTYFFDFAFPDQRTILETNGRRWHDDPADYEHDHEKWSVPGRHGYRLVLATWDKVT
Ga0207643_108647121	3300025908	Miscanthus Rhizosphere	LEVVTRRLLVAHGLADFDREFPLDWQGRTYWFDFAFPASRTILETNGRRWHDDPADYEGDNEKWSVPGRYGYKLVLATWDNVTRHGTQLIEELDITLAA
Ga0207687_105566512	3300025927	Miscanthus Rhizosphere	LLGQLDPAHPSRSTLEVKMRRLLLASGLTDFVREYPLESNDRAYHFDFAFLDRRTILETNGRRWHDDASDYEFDNDKWSVPGRHGFKLVLATWDKVTKRPDDRCGTAHDHGCMKSARNHH
Ga0207709_113634222	3300025935	Miscanthus Rhizosphere	RGQRGVASMRALLGQLDPAHPSRSTLEVKMRRLLLASGLTDFVREYPLESNDRTYHFDFAFLDRRTILETNGRRWHDDASDYEFDNDKWSVPGRHGFKLVLATWDKVTKRPDDRCGTAHDHGCMKSARNHHA
Ga0207709_116564531	3300025935	Miscanthus Rhizosphere	SRSKFEVLTRRLLVANRITGFTREFPIEWGGRTHRFDFAFERQQTILETNGRRWHDDPADYEDDHEKWSVPGRFGYRLVLATWDKVTRRPHEFLGELVATLEQRPSRLT
Ga0207691_102500501	3300025940	Miscanthus Rhizosphere	RPKHPSRSKLEVLTRRLLVANRITGFTREFPIEWGGRTHRFDFAFERQQTILETNGRRWHDDPADYEDDHEKWSVPGRFGYRLVLATWDKVTRRPHEFLGELVATLEQRPSRLT
Ga0207661_106567731	3300025944	Corn Rhizosphere	KFEVLTRRLLVANRITGFTREFPIEWGGRTHRFDFAFERQQTILETNGRRWHDDPADYEDDHEKWSVPGRFGYRLVLATWDKVTRRPHEFLGELVATLEQRPSRLT
Ga0207712_115688202	3300025961	Switchgrass Rhizosphere	LRTLMSELDPARPSRSTLEVVTRRLLVAHALADFDREFPLDWQGRTYWFDFAFPASRTILETNGRRWHDDPADYEGDNEKWSVPGRYGYKLVLATWDKVTRHGTQLIEELDITLAA
Ga0208294_10123861	3300026057	Natural And Restored Wetlands	VLEVKTRRLLVAAGLTDFVREFPLAWHGRTYRFDFAFARRRTILETNGRRWHDDAKDYEHDNEKWSVPGRHGYRIVLATWEKITRDPNRLLGELTSTLAAAS
Ga0209581_11603182	3300027706	Surface Soil	GGAGRPGTGALRRLLRELDPVHPARSTLEVKTRRLLVAHGLTNFVRELPLTWNGRTYRYDFAFPHQRVILETNGRRWHDDPRDYERDNERWSVPGRHGFRLVLATWSKVTEQPAALLRELTATMAA
Ga0209048_107598071	3300027902	Freshwater Lake Sediment	MRWPPIHAARSVLEVKTRRLLVARGFTHFIREFPLTWNGRTYRYDFAFEPERTILETNGRRGHDDPDDYESDNEKWSVPGRHGYRIVLATWDKVTRQPATLLSELATTLAA
Ga0209583_101609601	3300027910	Watersheds	VALRTLLDHIDPVHAARSVLEVKTRRLLVASGFTDFVREFPLDWRGRTYRFDFAFTRDRTILETNGRRWHDDANDYESDNEKWSVPGRHGYRIVLATWEKVTRRPAQLMTELATTLGQSGRMRPMS
Ga0209069_100433173	3300027915	Watersheds	LLRQLDPVHPSRSTLEVKARRLLVASGLTDFTREFPLTWDGRTYLFDFAFERRRTILETNGRRWHDDANDYESDNEKWSVPGRHGYRIVLATWEKVTRRPAQLMTELATTLGQSGRMRPM
Ga0265319_12835991	3300028563	Rhizosphere	LLVAHGLTGFVREFPLAWRGRTYLFDFACPLSRTILETNGRHWHDDATDYEHDNEKWSIPGRHGYRLVLATWEKVAHHPAHLLHELRATLAA
Ga0247822_107232091	3300028592	Soil	RYGGAGRPGVAPMRALLDELDPKHPSRSTLEVKTRRLLVANGITDFVREFPLTWKDKTYFFDFALHRSRTILETNGRRWHDDPRDFEHDNEKWSVPARHGYRIVFATWDKVTRCPDALVAELRATFRRSGRSVRL
Ga0247822_110109192	3300028592	Soil	VGRLLVAHGITNFVREYPLTWHAHTYFFDSCFEPERVILEANGRRWHDDATDYEHDNEKWSVPGRLGYRIVFATWDAVTRHPERLLNELTAALAA
Ga0247820_109064212	3300028597	Soil	ITNFVREYPLTWHAHTYFFDSCFEPERVILEANGRRWHDDATDYEHDNEKWSVPGRLGYRIVFATWDAVTRHPERLLNELTAALAA
Ga0311333_108154261	3300030114	Fen	ALRTYLAKFAVAGRPGVAALRALLDVVDPAHPARSALEVKARRLLVASGLTGFVREFPLDWNGRTYRFDFAFVRERVILETNGRRWHDDATDYESDNDEWSVPGRHGYRIVLATWHKVTRQPGRLVAEL
Ga0302323_1021242122	3300031232	Fen	PGVAALRALLDVVDPAHPARSALEVKARRLLVASELTGFVREFPLDWNGRTYRFDFAFVRERVILETNGRRWHDDATDYESDNDKWSVPGRHGYRIVLATWHKVTRQPGRLVAEL
Ga0265339_102380261	3300031249	Rhizosphere	PSLRAYLDRFPGRPGAAPLRRLLDGLDPVHAARSTLEVKTRRLLVVNGLTDFTREFPLVWNGRRYRFDFAFQDRRTILETNGRRWHDDAVDYEHDNEKWSVPGRHGYRLVLATWDKVEQHPTQLLAELATTLAA
Ga0318573_103538372	3300031564	Soil	MRALLGQLDPPHAARSTLEVKTRRLLVAHGITNFVREFPLEWDGRRHLFDFAFERECTVLETNGRRWHDNPADYEDGNDKWSVPGRHGYRIVLATWDKVTRTSNEFIRELVATMRA
Ga0265314_103217781	3300031711	Rhizosphere	IPAMRAYLDRFGRAGRPGVGALRHLVCELDPVHASRSTLEVKTRRLLLTNGITDFVREFPLDWHGRTYLFDFAFAGQHTILETNGRRWHGDANDYEHDNEKWSVPGRHGFRLVLATWAKVTRYPDRLMQELAATMAA
Ga0318496_105113772	3300031713	Soil	PVYAARSTLEVKMRRLLVGHGIEDFVREFPLEWNGRTYLFDFAFERERTILETNGRRWHDDAADYEGNNDKGSVPGHHGYRIVFATWDKVTRRPAELLRELAATMSA
Ga0302321_1019967031	3300031726	Fen	ANGITDFVRELPLDWNGRTYRYDFGFERSRMILETNGRRWHDDAADYEHDNEKWSVPGRLGHRIVFATWAKVTEHPSELVTELVATMAA
Ga0318511_104694272	3300031845	Soil	VYAARSTLKVKMRRLLVGHGIEDFVREFPLEWNGRTYLFDFAFERERTILETNGRRWHDDAADYEGNNDKGSVPGHHGYRIVFATWDKVTRRPAELLRELAATMSA
Ga0318536_101003392	3300031893	Soil	GRPGLAAMRALLGQLDPPHAARSTLEVKTRRLLVAHGITNFVREFPLEWDGRRHLFDFAFERECTVLETNGRRWHDNPADYEDGNDKWSVPGRHGYRIVLATWDKVTRTSNEFIRELVATMRA
Ga0318536_106347122	3300031893	Soil	IEDFVREFPLEWNGRTYLFDFAFERERTILETNGRRWHDDAADYEGNNDKGSVPGHHGYRIVFATWDKVTRRPAELLRELAATMSA
Ga0310909_116674671	3300031947	Soil	DPPHAARSTLEVKTRRLLVAHGITNFVREFPLEWDGRRHLFDFAFERECTVLETNGRRWHDNPADYEDGNDKWSVPGRHGYRIVLATWDKVTRTSNEFIRELVATMRA
Ga0318559_106212001	3300032039	Soil	MRALLREGDPVHPSRSTLEVKTRRLLVSHGLTDFEREWPLEWEGRTYRYDFAFVRDHVILETNGRRWHDDPTDYEDDNEKWSVPGRHGFKIVLATWNKVTRNPLGLIGELHTTLAP
Ga0318533_107489331	3300032059	Soil	YLRRFGRRGRPGVASMRRLLDQLDPVYAARSTLEVKMRRLLVGHGIEDFVREFPLEWNGRTYLFDFAFERERTILETNGRRWHDDAADYEGNNDKGSVPGHHGYRIVFATWDKVTRRPAELLRELAATMSA
Ga0318533_108046342	3300032059	Soil	TSVAALNTYLARFPNRAGMKSMRKLLAELDPVHASRSTLEVKTRRLLVANGFTDFVREFPLAWNGRTYFYDFCFDRRHTILETNGKRWHDDPADYEDDNDKWSVPGRHGYRVVFATWDKVTQRPHELLGEIAATLAA
Ga0318514_106827601	3300032066	Soil	VKTRRLLVAHGITNFVREFPLEWDGRRHLFDFAFERECTVLETNGRRWHDNPADYEDGNDKWSVPGRHGYRIVLATWDKVTRTSNEFIRELVATMRA
Ga0318518_105314422	3300032090	Soil	MRRLLDQLDPVYAARSTLEVKMRRLLVGHGIEDFVREFPLEWNGRTYLFDFAFERERTILETNGRRWHDDAADYEGNNDKGSVPGHHGYRIVFATWDKVTRRPAELLRELAATMSA
Ga0318540_104009841	3300032094	Soil	RRLLVGHGIEDFVREFPLEWNGRTYLFDFAFERERTILETNGRRWHDDAADYEGNNDKGSVPGHHGYRIVFATWDKVTRRPAELLRELAATMSA
Ga0335069_124195211	3300032893	Soil	RRLLVAHGLTGFVREHPLAWGRRTYRFDFAFLDDTTILETNGRRWHDDPHDYEIDNEKWSVPGRYGFKLVLATWDKVTAHPEALVNELLTTLAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105313

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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