NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105370

Metagenome Family F105370

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105370
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 37 residues
Representative Sequence HNEVNIKALEKAVTKLQSDVEKLKDKQREFGNGNSH
Number of Associated Samples 66
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 3.00 %
% of genes near scaffold ends (potentially truncated) 94.00 %
% of genes from short scaffolds (< 2000 bps) 91.00 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (62.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(50.000 % of family members)
Environment Ontology (ENVO) Unclassified
(97.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(87.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.12%    β-sheet: 0.00%    Coil/Unstructured: 46.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF08291Peptidase_M15_3 19.00
PF00313CSD 12.00
PF08007JmjC_2 1.00
PF00011HSP20 1.00
PF01555N6_N4_Mtase 1.00
PF01106NifU 1.00
PF14528LAGLIDADG_3 1.00
PF00856SET 1.00
PF137592OG-FeII_Oxy_5 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 1.00
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 1.00
COG0863DNA modification methylaseReplication, recombination and repair [L] 1.00
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 1.00
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 1.00
COG2850Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domainTranslation, ribosomal structure and biogenesis [J] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A62.00 %
All OrganismsrootAll Organisms37.00 %
unclassified Hyphomonasno rankunclassified Hyphomonas1.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000260|LP_A_09_P20_500DRAFT_1016912Not Available1091Open in IMG/M
3300001727|JGI24529J20061_100959Not Available1377Open in IMG/M
3300001727|JGI24529J20061_104756All Organisms → cellular organisms → Bacteria → Proteobacteria673Open in IMG/M
3300001728|JGI24521J20086_1007005Not Available1023Open in IMG/M
3300001732|JGI24652J20063_1032704All Organisms → Viruses → environmental samples → uncultured Mediterranean phage515Open in IMG/M
3300001735|JGI24520J20079_1000686All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2758Open in IMG/M
3300001743|JGI24515J20084_1000930Not Available2462Open in IMG/M
3300002511|JGI25131J35506_1003643Not Available2215Open in IMG/M
3300002511|JGI25131J35506_1058412All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005969|Ga0066369_10165545Not Available731Open in IMG/M
3300006304|Ga0068504_1334991Not Available569Open in IMG/M
3300006340|Ga0068503_10522581All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae1479Open in IMG/M
3300006340|Ga0068503_11003904Not Available646Open in IMG/M
3300006751|Ga0098040_1086784All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.949Open in IMG/M
3300006753|Ga0098039_1315879Not Available521Open in IMG/M
3300006754|Ga0098044_1007046All Organisms → cellular organisms → Bacteria → FCB group5437Open in IMG/M
3300006789|Ga0098054_1269933Not Available611Open in IMG/M
3300006793|Ga0098055_1159973All Organisms → Viruses864Open in IMG/M
3300006900|Ga0066376_10176544All Organisms → Viruses1291Open in IMG/M
3300006923|Ga0098053_1105677All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales567Open in IMG/M
3300006923|Ga0098053_1123433All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae519Open in IMG/M
3300006925|Ga0098050_1188707Not Available514Open in IMG/M
3300006926|Ga0098057_1084635Not Available773Open in IMG/M
3300006927|Ga0098034_1160499Not Available633Open in IMG/M
3300006928|Ga0098041_1276483All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales534Open in IMG/M
3300008216|Ga0114898_1180864Not Available595Open in IMG/M
3300008219|Ga0114905_1114947Not Available921Open in IMG/M
3300008219|Ga0114905_1260564Not Available543Open in IMG/M
3300008219|Ga0114905_1274977Not Available523Open in IMG/M
3300008220|Ga0114910_1083605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.970Open in IMG/M
3300009412|Ga0114903_1021068All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.1684Open in IMG/M
3300009412|Ga0114903_1043123Not Available1076Open in IMG/M
3300009413|Ga0114902_1026516Not Available1819Open in IMG/M
3300009414|Ga0114909_1182810Not Available540Open in IMG/M
3300009436|Ga0115008_11039358Not Available613Open in IMG/M
3300009603|Ga0114911_1120348Not Available753Open in IMG/M
3300009604|Ga0114901_1066589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.1199Open in IMG/M
3300009604|Ga0114901_1110418Not Available857Open in IMG/M
3300009605|Ga0114906_1087536Not Available1133Open in IMG/M
3300009605|Ga0114906_1162713Not Available764Open in IMG/M
3300009619|Ga0105236_1022314Not Available743Open in IMG/M
3300009619|Ga0105236_1039110Not Available606Open in IMG/M
3300009619|Ga0105236_1045141Not Available576Open in IMG/M
3300009620|Ga0114912_1090191Not Available742Open in IMG/M
3300009620|Ga0114912_1125133Not Available607Open in IMG/M
3300009622|Ga0105173_1027679Not Available886Open in IMG/M
3300010150|Ga0098056_1194126Not Available679Open in IMG/M
3300010155|Ga0098047_10140912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.934Open in IMG/M
3300010155|Ga0098047_10264830Not Available652Open in IMG/M
3300017773|Ga0181386_1270686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium500Open in IMG/M
3300019757|Ga0193964_1073708Not Available737Open in IMG/M
3300021442|Ga0206685_10181684All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon706Open in IMG/M
3300021973|Ga0232635_1186954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium521Open in IMG/M
3300022178|Ga0196887_1033178Not Available1422Open in IMG/M
(restricted) 3300024518|Ga0255048_10018730All Organisms → Viruses → environmental samples → uncultured virus3572Open in IMG/M
(restricted) 3300024518|Ga0255048_10037257Not Available2459Open in IMG/M
(restricted) 3300024520|Ga0255047_10169061Not Available1116Open in IMG/M
3300025044|Ga0207891_1008814All Organisms → Viruses → environmental samples → uncultured Mediterranean phage1630Open in IMG/M
3300025044|Ga0207891_1009773Not Available1480Open in IMG/M
3300025044|Ga0207891_1017465Not Available934Open in IMG/M
3300025045|Ga0207901_1038183Not Available646Open in IMG/M
3300025045|Ga0207901_1048962Not Available560Open in IMG/M
3300025046|Ga0207902_1033099All Organisms → Viruses635Open in IMG/M
3300025046|Ga0207902_1052301All Organisms → Viruses512Open in IMG/M
3300025052|Ga0207906_1003090Not Available2633Open in IMG/M
3300025096|Ga0208011_1074399Not Available751Open in IMG/M
3300025114|Ga0208433_1071577Not Available891Open in IMG/M
3300025114|Ga0208433_1083857All Organisms → Viruses807Open in IMG/M
3300025125|Ga0209644_1032743Not Available1162Open in IMG/M
3300025125|Ga0209644_1045311Not Available1000Open in IMG/M
3300025125|Ga0209644_1079261Not Available769Open in IMG/M
3300025125|Ga0209644_1079306Not Available768Open in IMG/M
3300025125|Ga0209644_1106879Not Available663Open in IMG/M
3300025125|Ga0209644_1112369Not Available647Open in IMG/M
3300025133|Ga0208299_1104435All Organisms → Viruses952Open in IMG/M
3300025259|Ga0207876_1043847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium597Open in IMG/M
3300025264|Ga0208029_1046032All Organisms → Viruses934Open in IMG/M
3300025274|Ga0208183_1061139Not Available736Open in IMG/M
3300025282|Ga0208030_1151902All Organisms → Viruses542Open in IMG/M
3300025282|Ga0208030_1168417Not Available504Open in IMG/M
3300025296|Ga0208316_1067061All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae701Open in IMG/M
3300025296|Ga0208316_1099295All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae521Open in IMG/M
3300025300|Ga0208181_1069833Not Available698Open in IMG/M
3300025873|Ga0209757_10015439All Organisms → Viruses2078Open in IMG/M
3300025873|Ga0209757_10031931Not Available1503Open in IMG/M
3300025873|Ga0209757_10036196Not Available1422Open in IMG/M
3300025873|Ga0209757_10069262Not Available1054Open in IMG/M
3300025873|Ga0209757_10163098Not Available700Open in IMG/M
3300025873|Ga0209757_10168972Not Available688Open in IMG/M
3300025873|Ga0209757_10208024All Organisms → Viruses620Open in IMG/M
3300025873|Ga0209757_10276400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium534Open in IMG/M
3300026117|Ga0208317_1015677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium505Open in IMG/M
3300031800|Ga0310122_10341946Not Available650Open in IMG/M
3300031886|Ga0315318_10001381Not Available10605Open in IMG/M
3300034628|Ga0326755_007591Not Available1016Open in IMG/M
3300034628|Ga0326755_028309unclassified Hyphomonas → Hyphomonas sp.565Open in IMG/M
3300034629|Ga0326756_049745All Organisms → Viruses → environmental samples → uncultured Mediterranean phage521Open in IMG/M
3300034654|Ga0326741_015196Not Available1395Open in IMG/M
3300034656|Ga0326748_019815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium900Open in IMG/M
3300034658|Ga0326751_027336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium563Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine50.00%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean25.00%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater6.00%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic5.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine4.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.00%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.00%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater Microbial Mat1.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.00%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids1.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000260Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500EnvironmentalOpen in IMG/M
3300001727Marine viral communities from the Pacific Ocean - LP-55EnvironmentalOpen in IMG/M
3300001728Marine viral communities from the Pacific Ocean - LP-46EnvironmentalOpen in IMG/M
3300001732Marine viral communities from the Deep Pacific Ocean - MSP-97EnvironmentalOpen in IMG/M
3300001735Marine viral communities from the Pacific Ocean - LP-45EnvironmentalOpen in IMG/M
3300001743Marine viral communities from the Pacific Ocean - LP-38EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300005969Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_AEnvironmentalOpen in IMG/M
3300006304Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300019757Microbial mat bacterial communities from the Broadkill River, Lewes, Delaware, United States - FB_7_MGEnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300021973Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Alice_FS923 _150kmerEnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025044Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025259Marine viral communities from the Deep Pacific Ocean - MSP-146 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025296Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026117Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500 (SPAdes)EnvironmentalOpen in IMG/M
3300031800Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300034628Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961EnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M
3300034658Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 524_CTDEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LP_A_09_P20_500DRAFT_101691253300000260MarineQEAGIHNEVMIKFLEKAVNKLQNDVEKLKDRQREFTNGNGVH*
JGI24529J20061_10095913300001727MarineVMIKFLEKAVNKLQNDVEKLKDKQRDFTNGSGVH*
JGI24529J20061_10475613300001727MarineMLHNEVGIKALDKAVDKLQRDVEKLKDKQRAFANGNSHD*
JGI24521J20086_100700533300001728MarineHNEVMIKFLEKAVNKLQNDVEKLKDKQRDFSNGNRTH*
JGI24652J20063_103270433300001732Deep OceanRVDSMLHNENEVGIKALDKATEKLQNDVEKLKDKQRDFANGNQ*
JGI24520J20079_1000686123300001735MarineNEVMIKFLEKAVNKLQNDVEKLKDKQRDFTNGNNHE*
JGI24515J20084_100093013300001743MarineHNEVMIKFLEKAVNKLQNDVEKLKDRQREFTNGNGVH*
JGI25131J35506_100364313300002511MarineAQQEAGIHNEVMIKFLDEQVKKLQSDVEKLKDRQREFTNGKIQ*
JGI25131J35506_105841233300002511MarineLQLQQEAGIHNEVMIKFLDEQVKKLQTDVEKLKDKQRDFTNGTHQ*
Ga0066369_1016554513300005969MarineNEVNIKALEKSVDKLQRDVEKLKDKQRAFANGDIQ*
Ga0068504_133499133300006304MarineNIAALNKAVEKLQSDVEKLKDKQRQFANGS**SKLL*
Ga0068503_1052258143300006340MarineVDSKIHNEVGIKALDKAVDKLQKDVEKLKDKQRTFSNGGTS*
Ga0068503_1100390443300006340MarineAGVKAQIKALDKAVEKLQSDVEKLKDKQRTFSNGNQ*
Ga0098040_108678413300006751MarineNEVNISALTKAVDKLQSDVEKLKDKQREFGNGGNH*
Ga0098039_131587913300006753MarineHNEVMIKFLDEQVKKLQNDVEKLKDRQREFTNGKIQ*
Ga0098044_100704613300006754MarineLQAQQEAGIHNEVMIKFLEEQVKKLQEDVEKLKDKQRDFSNGSKE*
Ga0098054_126993333300006789MarineHNEVNIEALTKAVNKLQSDVEKLKDRQRQFANGE*
Ga0098055_115997353300006793MarineEVMIKFLDEQVKKLQEDVEKLKDKQRDFSNGNGG*
Ga0066376_1017654413300006900MarineNEVGIKALDKATEKLQNDVEKLKDKQRTFSNGNQ*
Ga0098053_110567713300006923MarineQQEAGIHNEVMIKFLDEQVKKLQEDVEKLKDKQRDFSNGNHQ*
Ga0098053_112343333300006923MarineQERIDGMLHNAVNIDALTKAVEKLQRDVERLKDKRREFGNGNGSH*
Ga0098050_118870733300006925MarineDSMMHNEVNIEALTKAVNKLQSDVEKLKDRQRQFANGE*
Ga0098057_108463513300006926MarineHNEINISALTKAVEKLQSDVEKLKDKQREFSNGGTH*
Ga0098034_116049933300006927MarineEVNISALTKAVDKLQSDVEKLKDKQREFGNGNSH*
Ga0098041_127648333300006928MarineVNIEALTKAVNKLQSDVEKLKDKQRAFANGNGAH*
Ga0114898_118086413300008216Deep OceanNKVNIEALEKAVDKLQSDVEKLKDKQREFGNGGNH*
Ga0114905_111494713300008219Deep OceanHNDVNIKALEKAVEKLQKDVEKLKDKQRTFSNGNNH*
Ga0114905_126056413300008219Deep OceanNEVNITALNKAVEKLQSDVEKLKDKQRQFANGDK*
Ga0114905_127497713300008219Deep OceanNEVNITALNKAVEKLQGDVEKLKDKQRSFANGNNH*
Ga0114910_108360533300008220Deep OceanGMLHNEVNINALEKAVDKLQSDVEKLKDKQREFGNGGTH*
Ga0114903_102106853300009412Deep OceanLHNEVNISALTKAVEKLQSDVEKLKDKQREFGNGGNH*
Ga0114903_104312313300009412Deep OceanAVNIEALEKAVEKLQKDVERLKDKQREFGNGGTH*
Ga0114902_102651683300009413Deep OceanLHNAVNIEALEKAVEKLQIDVEKLKDKQREFSNGSNH*
Ga0114909_118281013300009414Deep OceanHNEVNIKALEKAVTKLQSDVEKLKDKQREFGNGNSH*
Ga0115008_1103935843300009436MarineHNEVNITALAKAVDKLQKDVEKLKDKQRTFSNGNGVH*
Ga0114911_112034813300009603Deep OceanEVNISALTKAVDKLQSDVEKLKDKQREFGNGGNH*
Ga0114901_106658913300009604Deep OceanAVNIDALTKAVEKLQSDVEKLKDKQREFGNGGNH*
Ga0114901_111041843300009604Deep OceanEVNITALNKAVEKLQGDVEKLKDKQRSFANGNNH*
Ga0114906_108753613300009605Deep OceanEVMIKFLDEQVKKLQSDVEKLKDKQRDFANGNKE*
Ga0114906_116271333300009605Deep OceanHNEVNIEALDKAVEKLQKDVERLKDKQREFGNGGNH*
Ga0105236_102231413300009619Marine OceanicHNEVNISALSKAVEKLQVDVEKLKDKQRAFSNGSTH*
Ga0105236_103911033300009619Marine OceanicMDKLQIRVDSMLHNEVGIKALDKAVEKLQSDVEKLKDKQ
Ga0105236_104514113300009619Marine OceanicGMLHNEVNINALEKAVDKLQSDVEKLKDKQREFGNGNSH*
Ga0114912_109019143300009620Deep OceanMLHNEVNIKALEKAVTKLQSDVEKLKDKQREFGNGNSH*
Ga0114912_112513313300009620Deep OceanHNEVNINALEKAVDKLQSDVEKLKDKQREFGNGGTH*
Ga0105173_102767913300009622Marine OceanicHNEVNIKALEKAVEKLQKDVERLKDKQREFGNGNGSNH*
Ga0098056_119412613300010150MarineNEVNISALSKAVDKLQSDVEKLKDKQREFGNGSNH*
Ga0098047_1014091213300010155MarineNEVNIKALDKAVNKLQSDVEKLKDKQRSFSNGEH*
Ga0098047_1026483013300010155MarineNEVMIKFLDEQVKKLQEDVEKLKDKQRDFSNGNGG*
Ga0181386_127068613300017773SeawaterNEVNISALSKAVEKLQSDVEKLKDKQRAFSNGSTH
Ga0193964_107370813300019757Freshwater Microbial MatNKVNIEFLKDQVEKLQRDVEKLKDKQRDFANGNNH
Ga0206685_1018168423300021442SeawaterLKMDSMTHNEVNINVLQDDVDDLKDDVERLKDKQREFSNGQK
Ga0232635_118695423300021973Hydrothermal Vent FluidsMLHNEVGIKALDKAVDKLQKDVEKLKDKQRDFANGEQ
Ga0196887_103317853300022178AqueousEVNITALAKAVDKLQKDVEKLKDKQRTFSNGNGVH
(restricted) Ga0255048_10018730133300024518SeawaterVDSMLHNEVNIKALEKAVEKLQKDVERLKDKQREFGNGSTH
(restricted) Ga0255048_10037257123300024518SeawaterAGIHNEVMIKFLEKAVNKLQNDVEKLKDKQREFTNGNGVH
(restricted) Ga0255047_1016906113300024520SeawaterKLQLQQEAGIHNEVMIKFLDEQVKKLQADVEKLKDKQREFSNGGTH
Ga0207891_100881413300025044MarineHNEVGIKALDKATEKLQNDVEKLKDKQRTFSNGNQ
Ga0207891_100977313300025044MarineHNDVNIKSLEKAVDKLQRDVEKLKDKQRSFSNGNEHD
Ga0207891_101746513300025044MarineLQLQQEAGIHNEVMIKFLEKAVNKLQNDVEKLKDRQREFTNGSGVH
Ga0207901_103818333300025045MarineAGIHNEVMIKFLEKAVNKLQNDVEKLKDKQREFTNGNEAH
Ga0207901_104896233300025045MarineIHNEVMIKFLDEQVKKLQDDVEKLKDKQRDFSNGNRTH
Ga0207902_103309913300025046MarineHNAVNIEALHKAVDKLQKDVEKLKDKQRTFSNGND
Ga0207902_105230133300025046MarineDSMLHNEIGIKALDKAVDKLQKDVEKLKDKQRTFSNGNGNE
Ga0207906_1003090113300025052MarineNEVMIKFLEKAVNKLQNDVEKLKDKQRDFSNGTRTH
Ga0208011_107439913300025096MarineNDVNIQALEKAVEKLQNDVEKLKDKQREFSNGDTH
Ga0208433_107157713300025114MarineNEVNIKALDKAVEKLQADVEKLKDKQRTFSNGDTH
Ga0208433_108385733300025114MarineNEVMIKFLDEQVKKLQEDVEKLKDKQRDFSNGNHQ
Ga0209644_103274353300025125MarineNEVNIKALEKAVEKLQSDVEKLKDKQRSFSNGDTQ
Ga0209644_104531153300025125MarineIHNEVMIKFLDEQVKKLQSDVEKLKDRQREFTNGKIQ
Ga0209644_107926113300025125MarineNEVGIKALDKAVEKLQSDVEKLKDKQRSFSNGGQE
Ga0209644_107930613300025125MarineVDSMLHNEVGIKALDKAVEKLQTDVEKLKDKQRSFSNGDTQ
Ga0209644_110687913300025125MarineMLHNEIGIKALEKAVDKLQSDVEKLKDKQREFSNGDQ
Ga0209644_111236913300025125MarineNEVMIKFLDEQVKKLQTDVEKLKDKQRDFTNGNSQ
Ga0208299_110443513300025133MarineQAQQEAGIHNEVMIKFLEEQVKKLQEDVEKLKDKQRDFSNGSKE
Ga0207876_104384713300025259Deep OceanMLHNEVGIKALDKAVDKLQKDVEKLKDKQRDFANGDQ
Ga0208029_104603253300025264Deep OceanHNAVNIEALEKAVEKLQIDVEKLKDKQREFSNGSNH
Ga0208183_106113913300025274Deep OceanVDSMMHNEVNIEALTKAVNKLQSDVEKLKDRQRQFANGE
Ga0208030_115190233300025282Deep OceanNEVNISALTKAVDKLQSDVEKLKDKQREFGNGGNH
Ga0208030_116841723300025282Deep OceanHNEVNITALNKAVEKLQGDVEKLKDKQRSFANGNNH
Ga0208316_106706133300025296Deep OceanLHNEVNISALTKAVEKLQSDVEKLKDKQREFGNGGNH
Ga0208316_109929513300025296Deep OceanMLHNAVNIDALTKAVEKLQLDVEKLKDKQREFSNGGTH
Ga0208181_106983313300025300Deep OceanHNEVNIKALEKAVTKLQSDVEKLKDKQREFGNGNSH
Ga0209757_1001543913300025873MarineMLHNEVGIKALDKAVDKLQKDVEKLKDKQRQFANGNQ
Ga0209757_1003193113300025873MarineGIHNEVMIKFLDQQVKKLQDDVEKLKDRQRDFTNGTQ
Ga0209757_1003619653300025873MarineEAGIHNEVMIKFLDEQVKKLQSDVEKLKDRQREFTNGKIE
Ga0209757_1006926213300025873MarineLHNEVGIKALDKAVEKLQSDVEKLKDKQRSFSNGDIQ
Ga0209757_1016309813300025873MarineHNEVGIKALDKAVDKLQSDVEKLKDKQRTFSNGGQE
Ga0209757_1016897233300025873MarineHNEVMIKFLDEQVKKLQSDVEKLKDRQREFTNGKIQ
Ga0209757_1020802413300025873MarineNDVNIKALEKAVDKLQKDVEKLKDKQRTFSNGNGND
Ga0209757_1027640013300025873MarineLHNEVNITALNKAVEKLQSDVEKLKDKQRQFANGSR
Ga0208317_101567713300026117Marine OceanicMLHNEVGIKALDKAVDKLQKDVEKLKDKQRQFANGGQ
Ga0310122_1034194633300031800MarineSMLHNEVGIKALDKAVDKLQKDVEKLKDKQRDFANGEH
Ga0315318_10001381133300031886SeawaterSMTHNEVNINVLKDDVDDLKDDVERLKDKQREFSNGNK
Ga0326755_007591_876_9923300034628Filtered SeawaterMLHNEIGIKALDKAVDKLQRDVEKLKDKQRTFSNGGQE
Ga0326755_028309_219_3323300034628Filtered SeawaterMLHNEVGIKALDKAVDKLQKDVEKLKDKQRSFSNGGQ
Ga0326756_049745_412_5193300034629Filtered SeawaterNEVGIKALDKATEKLQNDVEKLKDKQRDFANGDHQ
Ga0326741_015196_42_1643300034654Filtered SeawaterMLHNEVGIKALEKAVEKLQSDVEKLKDKQRSFSNGEHNAQ
Ga0326748_019815_789_8993300034656Filtered SeawaterLHNEVGIKALDKAVDKLQKDVEKLKDKQRQFANGGQ
Ga0326751_027336_434_5473300034658Filtered SeawaterMLQNEVGIKALNKAVEKLQSDVEKLKDKQRDFANGNQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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