NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105427

Metagenome Family F105427

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105427
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 44 residues
Representative Sequence LTVTGLEDVPDGQAVREGLTANNVRNKVADYFLTDAGAASWQMSKI
Number of Associated Samples 31
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 23
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(97.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.43%    β-sheet: 0.00%    Coil/Unstructured: 67.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF10545MADF_DNA_bdg 23.00
PF13359DDE_Tnp_4 8.00
PF03564DUF1759 1.00
PF02944BESS 1.00
PF00207A2M 1.00


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut97.00%
Macrotermes Natalensis Queen GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Macrotermes Natalensis Queen Gut2.00%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment → Termite Gut1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2209111004Macrotermes natalensis queen gut microbiomeHost-AssociatedOpen in IMG/M
3300001544Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300002125Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4Host-AssociatedOpen in IMG/M
3300002127Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3Host-AssociatedOpen in IMG/M
3300002175Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5Host-AssociatedOpen in IMG/M
3300002185Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300002238Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1Host-AssociatedOpen in IMG/M
3300002308Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4Host-AssociatedOpen in IMG/M
3300002450Cornitermes sp. P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191 P3Host-AssociatedOpen in IMG/M
3300002462Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P4Host-AssociatedOpen in IMG/M
3300002501Neocapritermes taracua P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P1Host-AssociatedOpen in IMG/M
3300002504Neocapritermes taracua P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P4Host-AssociatedOpen in IMG/M
3300002505Neocapritermes taracua P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P3Host-AssociatedOpen in IMG/M
3300002507Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P1Host-AssociatedOpen in IMG/M
3300002508Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P1Host-AssociatedOpen in IMG/M
3300002509Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P4Host-AssociatedOpen in IMG/M
3300002552Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1Host-AssociatedOpen in IMG/M
3300002834Cornitermes sp. P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P4Host-AssociatedOpen in IMG/M
3300006045Neocapritermes taracua P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P3Host-AssociatedOpen in IMG/M
3300006226Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3Host-AssociatedOpen in IMG/M
3300009784Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4Host-AssociatedOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010162Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)Host-AssociatedOpen in IMG/M
3300010369Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)Host-AssociatedOpen in IMG/M
3300027670Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)Host-AssociatedOpen in IMG/M
3300027864Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027891Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)Host-AssociatedOpen in IMG/M
3300027904Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027966Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027984Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028325Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
22126337282209111004Macrotermes Natalensis Queen GutMFQDAVKVADLEDVPAGHSVRVRLTANSVRNKELDCYLTDDGAVPWQM
22127245132209111004Macrotermes Natalensis Queen GutVTVTGLEDVPDGRSVHVGLTADIVRNKVSDYFLSDAGAV
JGI20163J15578_1002055733300001544Termite GutVTDLEGVPDEQSVRGGLTANSVRNKVADYFLIDAGAASWQMSKI*
JGI20163J15578_1008754653300001544Termite GutDVPDGQAVGGVLTTNGVRNKVADYFLTDAGAASW*
JGI20163J15578_1029718123300001544Termite GutLTVTGLEDVPDGQAVSGGLTGNSVRNKVADYFLTDAGAASWQM*
JGI20163J15578_1059046023300001544Termite GutVTVLEDVPDGQSVRGGLTANNIRNIVADYFVTDAGAASWQMSKI*
JGI20163J15578_1069961923300001544Termite GutVTGYEDAPDGQSVRGGLTANSVRNKAAYYFLTDAGAVLWQM*
JGI20165J26630_1018271123300002125Termite GutLTVTGLEDVPDGQAVCGGLTGNGVMNKVADYFVTDAGAASWQMSKYEQ*
JGI20164J26629_1015174733300002127Termite GutEDVPDGQAVRGGLTANSVRNKVADYFLTVAGAASWQMSKIYTLENMK*
JGI20164J26629_1019930133300002127Termite GutVTDLEGVPDEQSVRGGLTANSVRNKVADYFXIDAGAASWQMSKI*
JGI20164J26629_1021316013300002127Termite GutVTGLEDVPDGQAVCGGLTGNGVMNKVADYFVTDAGAASWQMSKYEQ*
JGI20166J26741_1002078713300002175Termite GutDVPDGQGVRGGLTANSVRNKLADYFLTYAGATSWQLSKI*
JGI20166J26741_1039161663300002175Termite GutTGLEDVPDGQAVRGGLTANSVRNKVADYFLTDARDASWQMSKK*
JGI20166J26741_1145574333300002175Termite GutVTGLEDVPDGQAVRGGLTANGVMNKVADYFVTDAGAASWQMSKYEQ*
JGI20166J26741_1176137443300002175Termite GutTVTGLEDVPDGQAVRGGLTANSVRNKVADYFLTVAGAASWQMSKIYTLENMK*
JGI20166J26741_1203172313300002175Termite GutEDVPDGQAVRGGLTANSVRNKVADYFLTDAGAAFWQMSKI*
JGI20166J26741_1204832993300002175Termite GutDALTVTGLEDVPDGQAVRGGLTANSVGNKVADYFLTDAGAASWQMSKI*
JGI20166J26741_1227493323300002175Termite GutLTVTGLEDVPDGQAVREGLTANNVRNKVADYFLTDAGAASWQMSKI*
JGI20163J26743_1052686923300002185Termite GutVTVTGLEHVPDGQSKRRGLTANNVRNKVADYFLTDAGAVPWKM*
JGI20163J26743_1059478123300002185Termite GutVTGLEDVPDGQSLPGGLTANSVRNKVADYFLTDTGAASWQI*
JGI20163J26743_1064715113300002185Termite GutLEDVPDGQSVREGLTANNVRNKVADYFLIDAGAASWQMSKICTVEHMK*
JGI20163J26743_1080104933300002185Termite GutLYLMGQSVLGEGGLTAKNVRNKVADYLITDAGAVSWQM*
JGI20163J26743_1125382923300002185Termite GutLIVTVLEDVPDGQSVRGGLTANNIRNIVADYFVTDAGAASWQMSKI*
JGI20169J29049_1069928813300002238Termite GutTVTGLEDVPDGQSVRGGLTANSVRKTVADYFLIDARAASWQMSKK*
JGI20169J29049_1122345113300002238Termite GutMTVTGLEDVPDGQSVRWGLTANSVRNTVADYFLTDAGAVPWQMLKYEQ*
JGI20169J29049_1132467023300002238Termite GutLTVTGLEDVPDGRSVRGGLTANNVRNKVADYFLTDVGAASWQM*
JGI20171J29575_1177435813300002308Termite GutGLEDVPDGQSVRGGLTANSVRKTVADYFLIDARAASWQMSKK*
JGI20171J29575_1204508213300002308Termite GutVTGYEDAPDGQSVRWGTANNVRNKAAYYFLTDAGAVAWQTSKI*
JGI20171J29575_1231461823300002308Termite GutVTGLEDVPDGQSVRGGLTANNIRNKVVDYFLTDTEAASWEM*
JGI24695J34938_1035440323300002450Termite GutMVIILKTFTVTGLEDVLDGQTVRGGITANNVRNKVVDCFLTDAGAASWQMSKI*
JGI24695J34938_1051863713300002450Termite GutMTVTGLVDVPDGQLVLVGLTANSVRNRVADYFLRDAGVFPWQM*
JGI24702J35022_1019637623300002462Termite GutLTVTGLKDVPDGQSVRGGLTANSVRNKVTDYFLTDDGAAS*
JGI24703J35330_1107678623300002501Termite GutLTVTGLEDIPGGQSVRGVLTANNVKNKVADYFLTDAGAASWQMSKI*
JGI24703J35330_1108872513300002501Termite GutVTSLEGVPDGQSIRGGLTTNNVRNKVADYFLTDTGAASWQMSKI*
JGI24703J35330_1109745323300002501Termite GutVTCLECVPDGQSVRGVLTANNIRNKVADHYLTDAGAVPWKLSKT*
JGI24703J35330_1138175913300002501Termite GutMTVTGLEHVPHGQSVFGGLTANNVGYKVADYFLTDTAAVSWQM*KM*TIEYVK*
JGI24703J35330_1148843323300002501Termite GutMTVTGFEDAPDGQSVRGGLTAKNVRNNVADYFLRDAGALTWQI*
JGI24703J35330_1159132113300002501Termite GutVTGLEDVPGGQSVRGGLTASNARNKVADYFPTDAGAVPWQMSKI*
JGI24705J35276_1181748423300002504Termite GutVTALEDVPHGQSVCGGLTAKSVRNNVADYFLTEAGAASWQMSKI*
JGI24705J35276_1220751023300002504Termite GutLTVTGLEGVPDGQPVRGGLTANNVRNKVADYFLTDAGAASWQM*
JGI24704J35079_1034180623300002505Termite GutTGLEDVPDEQSVRAGLTANSVRNKAADYFLTDAGAASWQMSKI*
JGI24697J35500_1059126223300002507Termite GutLTGTGLEDVPDGQSVRGELTANNVRNKVANYFLTDARAATWQMSKI*
JGI24697J35500_1074869323300002507Termite GutLTVTCLEDVPDGQSVREGLTANNVRNKVADYFLTDVGAASWQMSKI*
JGI24697J35500_1106042313300002507Termite GutVLVNGLEDITDGQSARGGRGLTANNVRNTVAHYVLTDAEAVPL
JGI24697J35500_1115711813300002507Termite GutLTGTGLEDVPEGQSVRGGLTANNIRNKVADYFLTDAGAALWQMSKIRTVE
JGI24697J35500_1118043533300002507Termite GutVTGLEDVPGGPSVSGGLTANNVRNKVADYFLTDSGAASWQMSKNMNNRA*
JGI24697J35500_1119601123300002507Termite GutMTVTGLEDVPNGQLVRVGLTVNKVRNRVADYFLKDAGAFPWQM*
JGI24697J35500_1123624933300002507Termite GutMNVTGLEDAPDGQSVRRGLTANNKAADYFLRDDVALPSKI*
JGI24697J35500_1123904343300002507Termite GutMTVTGLEHVRNGKSVREGLTANSVGCKVADYFLTDAAAVPWQMSKI*
JGI24700J35501_1015652413300002508Termite GutGLEDVPDGQSVRGGLTANSVRNKVADYFLTDAGTSSWQM*
JGI24700J35501_1041326323300002508Termite GutMTATGLQHVPKDNHYVGGLTANNVGYKVADYLLTDAAAVPWQIS*
JGI24700J35501_1065483113300002508Termite GutEDALTVTCLEDVADGQSARGGLTAINIRNKSADYFLTDAGAASWRMSKI*
JGI24700J35501_1084361413300002508Termite GutLEDVPDGQSVRGGLTANSVRNKVADYFLTDDGAASRQMSKI*
JGI24700J35501_1090586943300002508Termite GutMTVTGLEDVSDGQSVRGGLTANNVRNKVADYFLTDDGVVL*
JGI24699J35502_1070943833300002509Termite GutGTGLEDVPEGQSVRGGLTAKNVRNKVADYFLTDAGAASWQM*
JGI24699J35502_1080186813300002509Termite GutLTGTGLEDVPEGQSVRGGLTANNIRNKVADYFLTDAGAALWQMSKIRTVE*
JGI24699J35502_1093147613300002509Termite GutLTGTGLEDLPEGQSVRGELTVNNVRNKVANYFLTDARAATWQMSKI*
JGI24699J35502_1096241523300002509Termite GutLTGTGLEDVPEGQTVRGGLTAINIRNKVADYFLTDVRAASWQMSKI*
JGI24694J35173_1018756333300002552Termite GutLTGTGLEDVSDGQSVHGGLKANNVRNKVADYFLTDAGSASWQM*
JGI24694J35173_1068595113300002552Termite GutMTVTGLEHVPDGQLIRRGLTADNVRNKVADYFLTDAGAVPWQM*
JGI24696J40584_1263915313300002834Termite GutMTVTGLEHIRNGQSVREGLTANSVGYKVADYFLTDAGAVPWQMSKILTVQYI
Ga0082212_1050236923300006045Termite GutLTVTGLEDVPGGQSVRGGLTASNARNKVADYFPTDAGAVPWQMSKI*
Ga0082212_1066564423300006045Termite GutMTVTGLEHVPHGQSVFGGLTANNVGYKVADYFLTDTAAVSWQM*
Ga0082212_1073720813300006045Termite GutMTVTGLEHVPNGQSVRAGLTANNVGYKVADYFLTDAAAVPWKMSKNMNSRVYKMR
Ga0099364_1008985823300006226Termite GutVTGLEDVPDRQSVRGGLTANSVRNKVADYFVTDAGAASWHI*
Ga0099364_1033808513300006226Termite GutVIGLEDVPDGQSVRGGLTANNVRNKAADCFVTDAGADSWQM*
Ga0099364_1074680223300006226Termite GutVPDGQSVRGGGLTAKNVRNRVADYLITDAGAVPWQM*
Ga0099364_1089243813300006226Termite GutLTANGLEDIPDGQSERRGLKANNVRNKVADCFLTDAEAAS*
Ga0099364_1092416213300006226Termite GutKDAMRVTGLEDVPNGLSVCGELTEDNVRNQVAYYFLTDAGVVAWKM*
Ga0099364_1156797123300006226Termite GutLEDVPDGQSVRGELTANSVRNKVADYFPTDAGAASWQMSKI*
Ga0123357_1002594843300009784Termite GutMVMFEDALTVTGLEDVPDGQSVCGELTANNVRNKVADYFLTDARAASWQM*
Ga0123355_1024599243300009826Termite GutVTGLEDVADGQSVRGGGLTSNSARNTITDYSVTDAGAVPWQMSKV*
Ga0123355_1158181213300009826Termite GutLTGTGLKDVPEGQSLLGGLTANNIRNEAADYFLTDSGAASWQMSKI*
Ga0131853_10003092113300010162Termite GutMKMTGLEGAPDGQSVRGGLTANNKVADYFLRDAVALPWLISKI*
Ga0131853_10020058153300010162Termite GutITVTGLEDVPDGQSVGLTANSVRNKVADYLLTDAGSVPWQM*
Ga0131853_1004531453300010162Termite GutITVTGLEDVPDGQSVGLTANSVRNKVADYLLTDAGSVPWQI*
Ga0131853_1109858913300010162Termite GutVTGLEDVPDGQSVGLTANSVRNKVADYLLTDAGSVPWQ
Ga0136643_10008626113300010369Termite GutLIGTGLENVPEYQSVCEGGGLTVNNIRNKVADYFVTDVTDA
Ga0136643_1001337523300010369Termite GutMVISLKTFTVTGLEDVLYGQTVRWGITANNVRNKVADYFLTEAGAASWQMSKI*
Ga0136643_1006406613300010369Termite GutLTWTGFEDVPEGQSIRGGLTANNIRNKVADYFLTDAGAAS
Ga0209423_1002652823300027670Termite GutEDALTVTGLEDVPGGQSVRGGLTANNVRNKVADYFLTDAGAASWQM
Ga0209423_1042983623300027670Termite GutLEDVPDGQSVRWGLTANSVRNTVADYFLTDAGAVPWQMLKYEQ
Ga0209755_1009627143300027864Termite GutMTVTGLEHVPDGQLIRRGLTADNVRNKVADYFLTDAGAVPWQM
Ga0209755_1081615413300027864Termite GutLVIRQDAFTGTGLEDVPEGQSVRGRLTANNTRNKVADCLLTDAGAVPWQMSKI
Ga0209628_1000853963300027891Termite GutVTDLEGVPDEQSVRGGLTANSVRNKVADYFLIDAGAASWQMSKI
Ga0209628_1001987043300027891Termite GutVTVTGFEDVSDGQSVRGGLTANNVRNKVTDYFLTDDGAVP
Ga0209628_1043542723300027891Termite GutVTGLEDVPDGQAVCGGLTGNGVMNKVADYFVTDAGAASWQMSKYEQ
Ga0209628_1134580113300027891Termite GutEDALTMTGLEDVPDGQSVREGLKANSVRNKVADYFLTNAGAACWQM
Ga0209737_1006397333300027904Termite GutMGQSVLGEGGLTAKNVRNKVADYLITDAGAVSWQM
Ga0209737_1062246913300027904Termite GutVTVLEDVPDGQSVRGGLTANNIRNIVADYFVTDAGAASWQMSKI
Ga0209737_1074094013300027904Termite GutMTGLEDVPDGQSVREGLKANSVRNKVADYFLTNAGAACWQM
Ga0209737_1082612733300027904Termite GutVTGLEDVPDGQAVGGVLTTNGVRNKVADYFLTDAGAASW
Ga0209738_1005563113300027966Termite GutMTVTGLEDVPDGQSVLWGLTANSVRNTVADYFLTDAGAVPWQMLKYEQ
Ga0209738_1056136713300027966Termite GutEDVPDGQSVRGGLTANSVRKTVADYFLTDAGAASWQM
Ga0209629_1012106023300027984Termite GutVTGLEDVPDGQAVSGGLTGNSVRNKVADYFLTDAGAASWQM
Ga0209629_1013989213300027984Termite GutYMFEDALTVTGLEDVPDGQAVRGGLTANSVRNKVADYFLTDARDASWQMSKK
Ga0209629_1068711213300027984Termite GutTVTGLEDVPDGQAVCGGLTGNGVMNKVADYFVTDAGAASWQMSKYEQ
Ga0209629_1088387823300027984Termite GutEDVPDGQAVRGGLTANSVRNKVADYFLTDAGAASWQMSKI
Ga0268261_1002068833300028325Termite GutVTGLEDVPDGQSVRGGLTANSVRNTVADYFLTDAGATSWQM
Ga0268261_1003797023300028325Termite GutVTGLEDVPDGQSVRGGLTANNIRNKVVDYFLTDTEAASWEM

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Biomedical Sciences Research Center "Alexander Fleming"
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