Metagenome Family F105642

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F105642
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	76 residues
Representative Sequence	MRFGIRMLGMTTILFGVYGTALKDAHPQSAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGT
Number of Associated Samples	73
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.00 %
% of genes near scaffold ends (potentially truncated)	99.00 %
% of genes from short scaffolds (< 2000 bps)	94.00 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.000 % of family members)
Environment Ontology (ENVO)	Unclassified (41.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.37% β-sheet: 11.11% Coil/Unstructured: 68.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00106	adh_short	21.00
PF05199	GMC_oxred_C	9.00
PF12697	Abhydrolase_6	4.00
PF13561	adh_short_C2	4.00
PF00561	Abhydrolase_1	3.00
PF07228	SpoIIE	3.00
PF12680	SnoaL_2	2.00
PF00206	Lyase_1	1.00
PF01638	HxlR	1.00
PF00034	Cytochrom_C	1.00
PF08002	DUF1697	1.00
PF12867	DinB_2	1.00
PF01042	Ribonuc_L-PSP	1.00
PF02518	HATPase_c	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	9.00
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.00
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.00
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
All Organisms	root	All Organisms	41.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
cellular organisms	root	All Organisms → cellular organisms	41.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	3.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.00 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101659965	Not Available	592	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101660038	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1073975	Not Available	600	Open in IMG/M
3300004479\|Ga0062595_101959898	Not Available	564	Open in IMG/M
3300004633\|Ga0066395_10857531	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005332\|Ga0066388_100432844	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300005332\|Ga0066388_101815722	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300005332\|Ga0066388_106743206	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	578	Open in IMG/M
3300005435\|Ga0070714_101086031	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005437\|Ga0070710_10734619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	700	Open in IMG/M
3300005439\|Ga0070711_101217689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	652	Open in IMG/M
3300005471\|Ga0070698_101923254	Not Available	545	Open in IMG/M
3300005518\|Ga0070699_101275305	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005713\|Ga0066905_100779781	Not Available	827	Open in IMG/M
3300005764\|Ga0066903_105691112	Not Available	655	Open in IMG/M
3300005764\|Ga0066903_105819392	Not Available	647	Open in IMG/M
3300006049\|Ga0075417_10267561	Not Available	822	Open in IMG/M
3300006175\|Ga0070712_100328921	Not Available	1245	Open in IMG/M
3300006844\|Ga0075428_100557912	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300006844\|Ga0075428_100785375	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300006845\|Ga0075421_100648348	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300006845\|Ga0075421_102319668	Not Available	563	Open in IMG/M
3300006847\|Ga0075431_100382478	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300006854\|Ga0075425_100905458	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300006871\|Ga0075434_100178783	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300006903\|Ga0075426_10074169	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300009088\|Ga0099830_11201935	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300009147\|Ga0114129_11058947	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300009147\|Ga0114129_12642309	Not Available	599	Open in IMG/M
3300009147\|Ga0114129_13155248	Not Available	537	Open in IMG/M
3300009792\|Ga0126374_10845099	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300009792\|Ga0126374_11056175	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300009792\|Ga0126374_11251278	Not Available	597	Open in IMG/M
3300009792\|Ga0126374_11643100	Not Available	532	Open in IMG/M
3300010047\|Ga0126382_10892638	Not Available	768	Open in IMG/M
3300010358\|Ga0126370_10432450	Not Available	1092	Open in IMG/M
3300010358\|Ga0126370_10657578	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300010358\|Ga0126370_11004703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	762	Open in IMG/M
3300010359\|Ga0126376_12282370	Not Available	587	Open in IMG/M
3300010359\|Ga0126376_12392764	Not Available	575	Open in IMG/M
3300010359\|Ga0126376_13252272	Not Available	502	Open in IMG/M
3300010360\|Ga0126372_11532130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300010360\|Ga0126372_11807157	Not Available	654	Open in IMG/M
3300010360\|Ga0126372_13183780	Not Available	510	Open in IMG/M
3300010361\|Ga0126378_12357910	Not Available	608	Open in IMG/M
3300010362\|Ga0126377_11128661	Not Available	853	Open in IMG/M
3300010366\|Ga0126379_12105687	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300010376\|Ga0126381_102880299	Not Available	685	Open in IMG/M
3300010376\|Ga0126381_104002739	Not Available	573	Open in IMG/M
3300010376\|Ga0126381_104660966	Not Available	528	Open in IMG/M
3300010398\|Ga0126383_10471077	Not Available	1309	Open in IMG/M
3300010398\|Ga0126383_12395526	Not Available	613	Open in IMG/M
3300012948\|Ga0126375_10872664	Not Available	720	Open in IMG/M
3300012948\|Ga0126375_11570711	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300016341\|Ga0182035_11520094	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300016341\|Ga0182035_12163539	Not Available	504	Open in IMG/M
3300016357\|Ga0182032_10248995	Not Available	1380	Open in IMG/M
3300016357\|Ga0182032_10687470	Not Available	858	Open in IMG/M
3300016422\|Ga0182039_10529122	Not Available	1022	Open in IMG/M
3300016422\|Ga0182039_11522162	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300016445\|Ga0182038_12190773	Not Available	501	Open in IMG/M
3300021560\|Ga0126371_10238916	Not Available	1927	Open in IMG/M
3300021560\|Ga0126371_10282769	All Organisms → cellular organisms → Bacteria → Acidobacteria	1781	Open in IMG/M
3300025898\|Ga0207692_10809419	Not Available	613	Open in IMG/M
3300025915\|Ga0207693_10788630	Not Available	733	Open in IMG/M
3300025916\|Ga0207663_11035393	Not Available	659	Open in IMG/M
3300025939\|Ga0207665_11667775	Not Available	505	Open in IMG/M
3300027576\|Ga0209003_1069127	Not Available	647	Open in IMG/M
3300027654\|Ga0209799_1026976	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300027874\|Ga0209465_10053201	All Organisms → cellular organisms → Bacteria → Acidobacteria	1940	Open in IMG/M
3300027909\|Ga0209382_10049975	All Organisms → cellular organisms → Bacteria	4984	Open in IMG/M
3300027909\|Ga0209382_11264692	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031561\|Ga0318528_10199245	Not Available	1071	Open in IMG/M
3300031573\|Ga0310915_11148331	Not Available	538	Open in IMG/M
3300031668\|Ga0318542_10712325	Not Available	525	Open in IMG/M
3300031720\|Ga0307469_10442264	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300031740\|Ga0307468_100992371	Not Available	738	Open in IMG/M
3300031770\|Ga0318521_10041267	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300031805\|Ga0318497_10332908	Not Available	847	Open in IMG/M
3300031820\|Ga0307473_10400181	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300031833\|Ga0310917_10600414	Not Available	747	Open in IMG/M
3300031846\|Ga0318512_10138354	Not Available	1169	Open in IMG/M
3300031879\|Ga0306919_10006778	All Organisms → cellular organisms → Bacteria	6194	Open in IMG/M
3300031890\|Ga0306925_12139990	Not Available	523	Open in IMG/M
3300031894\|Ga0318522_10253748	Not Available	667	Open in IMG/M
3300031910\|Ga0306923_11135192	Not Available	839	Open in IMG/M
3300031912\|Ga0306921_10970452	Not Available	960	Open in IMG/M
3300031912\|Ga0306921_12163736	Not Available	587	Open in IMG/M
3300031941\|Ga0310912_11028250	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031946\|Ga0310910_11450886	Not Available	527	Open in IMG/M
3300031959\|Ga0318530_10277055	Not Available	692	Open in IMG/M
3300032035\|Ga0310911_10848836	Not Available	527	Open in IMG/M
3300032044\|Ga0318558_10460122	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300032063\|Ga0318504_10406133	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300032076\|Ga0306924_10038668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5226	Open in IMG/M
3300032090\|Ga0318518_10300766	Not Available	823	Open in IMG/M
3300032091\|Ga0318577_10218390	Not Available	912	Open in IMG/M
3300032180\|Ga0307471_102499425	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300033289\|Ga0310914_11885646	Not Available	502	Open in IMG/M
3300033290\|Ga0318519_10928993	Not Available	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.00%
Host-Associated	Host-Associated	14.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.00%
Plants	Host-Associated → Plants	14.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.00%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.00%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1016599651	3300000364	Soil	MRFGIRMLGITGIIFGACGISLKNAHPQLAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQ
INPhiseqgaiiFebDRAFT_1016600381	3300000364	Soil	MRFGIRMLGITAILFGVYGTALKDAHPQSAAGSRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDRKN
AF_2010_repII_A100DRAFT_10739751	3300000655	Forest Soil	MRFGIRILGMTTILFGVYGTAMKGAHPQSASDSRATPLILEKNEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMF
Ga0062595_1019598981	3300004479	Soil	MRFGIRMLGITGIIFGACGISLKNAHPQLAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIK
Ga0066395_108575311	3300004633	Tropical Forest Soil	MRLGLQVLSVSTILFGAYGIALNHAHPQSARDNRTTPLILEKREGEHRGRKVREIPIPTGPFTIKVDRKNG
Ga0066388_1004328442	3300005332	Tropical Forest Soil	MRFGILMLGMTVMLFSAFFGAYGIALNDAHPQSLDDTRGTPLILEKNEGEHRVRRPRETPVPTGSFTIKVDRKNGGSQ
Ga0066388_1018157223	3300005332	Tropical Forest Soil	MRLGLQMLSLSTILVGAYGIALNDARPHSARDNTITPLILAKSEGEHRVRRPREIPIPIGAFTIKVDRRNGGSQKMWLGTE
Ga0066388_1067432061	3300005332	Tropical Forest Soil	MRFGLQVLSLSTILFGVYGIALNDAHPPSARDNQTTPLILEKSEGEHRVRKPRELPIPTGPFTIKVDRKNGGSQKMWLGTEEIPPGGMI
Ga0070714_1010860313	3300005435	Agricultural Soil	MRFGIRMLGITGIIFGACGISLKNAHPQLAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEIPAG
Ga0070710_107346191	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRFGIRMLGITAILFGVYGTALKDAHPQSAAGSRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEIPAGGLI
Ga0070711_1012176891	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRFGIRMLGITAILFGVYGTALKDAHPQSAAGSRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEIPAGG
Ga0070698_1019232542	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRFGIRMLGITGIIFGACGISLKNAHPQLAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEIP
Ga0070699_1012753051	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRLELQVLSLSTILFGAYGIALNDAHPQSARDNRTTPLILEKSEGERRVRKPRDIPTPTGPFTIKVDRKNGGSQKMWLGTEEIPP
Ga0066905_1007797811	3300005713	Tropical Forest Soil	MRFGLQVLTLSTILFGVYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVD
Ga0066903_1056911121	3300005764	Tropical Forest Soil	MRCGLHVLTLSTILFGVYGIALHDAHPQSARDHKTTPLILEKSEGEHRVRKPRELPIPTGPFTIKVDRKNGGSQKMWLGTEEIPPGGMIPRHKH
Ga0066903_1058193921	3300005764	Tropical Forest Soil	MRFGLQVLSLSTILFGVYGIALNDAHPPSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRKNGGSQKMWL
Ga0075417_102675611	3300006049	Populus Rhizosphere	MRFGLQVLSLSTILFGASGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFT
Ga0070712_1003289212	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRFGIRMLGITAILFGVYGTALKDAHPQSAAGSRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEIP
Ga0075428_1005579121	3300006844	Populus Rhizosphere	MRFGLQVLSLSTILFGASGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVD
Ga0075428_1007853751	3300006844	Populus Rhizosphere	MRFGLQVLSLSTILFGAYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVD
Ga0075421_1006483481	3300006845	Populus Rhizosphere	MRFGLQVLSLSTILFGASGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRK
Ga0075421_1023196682	3300006845	Populus Rhizosphere	MRFGLQVLILSTILFGAYGIALNDAHPPSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRK
Ga0075431_1003824781	3300006847	Populus Rhizosphere	MRFGLQVLSLSTILFGAYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRKNGGSQKMWLG
Ga0075425_1009054583	3300006854	Populus Rhizosphere	MRFGLQVLSLSTILFGAYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIK
Ga0075434_1001787831	3300006871	Populus Rhizosphere	MRFGLQVLSLSTILFGAYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRKNGGSQKMWLGTEEIP
Ga0075426_100741693	3300006903	Populus Rhizosphere	MRLGLQVLSLSTILFGAYGIALNDAHPQSARDNRTTPLILEKSEGERRVRKPREIPTPTGPFTIKVDRKNGGSQKMWLGTEEIPP
Ga0099830_112019351	3300009088	Vadose Zone Soil	GPGAALNDAELRHAADTNTGTTPLVLERDEGEHRVRRPRETPVPTAEFMIKIDRKNGGSQKMWLGAEDIPPG*
Ga0114129_110589473	3300009147	Populus Rhizosphere	MRFGLQVLSLSTILFGAYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDR
Ga0114129_126423091	3300009147	Populus Rhizosphere	MRFGLQVLSLSTILFGASGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDR
Ga0114129_131552481	3300009147	Populus Rhizosphere	MRFGLQVLILSTILFGAYGIALNDAHPPSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRKN
Ga0126374_108450991	3300009792	Tropical Forest Soil	MRFGLQVLSLSTILFSAYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRKNGGSQKMWLG
Ga0126374_110561751	3300009792	Tropical Forest Soil	MLGVTTILFGAFGIALKDAHPQSAADSRVTPLILEKNEGEHRVRRPRETSVPTGPFTIKIDRNNGGSQKMFAGTEEIPVGG
Ga0126374_112512781	3300009792	Tropical Forest Soil	VLTLSTILFGVYGIALHDAHPPSARDHNTTPLILEKSEGEHRVRKPRELPIPTGPFTIKVDRKNGGSQKMWLGTEE
Ga0126374_116431002	3300009792	Tropical Forest Soil	MLGMTGILFGVCGIALKDAHPQSAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGASQKMFAGTEEVPAGGLIP
Ga0126382_108926382	3300010047	Tropical Forest Soil	MRCGLHVLTLRTILFGVYGIALHDAHPPLARDHTTTPLMLEKSEGEHRVRKPREIPIPTGPFTI
Ga0126370_104324502	3300010358	Tropical Forest Soil	MTTILFGAYGTALKDAPQSAADTRGTPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQRMFLSTEEIPAGGLIP
Ga0126370_106575782	3300010358	Tropical Forest Soil	MRFGLQVLTLSTILFGVYGIALHDAHPPSARDNTTTPLILEKSEGEHRVRKPRELPIPTGPFTIKVDRKNGGSHKMWLGTG*
Ga0126370_110047031	3300010358	Tropical Forest Soil	MLGLTTILFGTHSITVNEAHPKSSGETKTIPLMLEKNEGEHRVRRPRETPIPTSEFTIKIDRKNGGSQKMWMGTEEIPPGGIIGRHKH
Ga0126376_122823702	3300010359	Tropical Forest Soil	MLGATTILFGAFVIALKDAHPQSAADTRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGS
Ga0126376_123927641	3300010359	Tropical Forest Soil	MRFGLQVLTLSTILFGAYGIALNDAHPPSARDSTTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRKNGGSQK
Ga0126376_132522721	3300010359	Tropical Forest Soil	MLGMTTIFFGVYGTVLMDPHPQSAADSRTTPPIPEKSEGEHRVRRPRETPVPTGPFTIKIDRKNG
Ga0126372_115321302	3300010360	Tropical Forest Soil	MLGMTTILFAAYGIALKDAHPQPAADTGATALILEKNEGEHRVRRPRETPVPTGPFTIKIDRK
Ga0126372_118071572	3300010360	Tropical Forest Soil	MIRMLGMTAILFGVYGTALKDAHPQSAADSSTTPLILEKNEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGTEEIPAGG
Ga0126372_131837801	3300010360	Tropical Forest Soil	MLGATTILFGAFVIALRDAHPQSAADTRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNG
Ga0126378_123579101	3300010361	Tropical Forest Soil	MLGMTTILFGVYGTTLKHAHPQSAADSRATPLILEKNEGEHRVRRPRETPAPTGPFMIKIDRKNGGSQKMFAGTEEIPAGGIIPR
Ga0126377_111286612	3300010362	Tropical Forest Soil	MRFGLHVLTLSTLLFGVYGIALNDAHPPSARDSTTTPLILEKSEGEQRVRKPRAIPIPTGPFTIKVDRKNGGSQ
Ga0126379_121056872	3300010366	Tropical Forest Soil	MLGIATILFGVCGTALKDAHPQSAPDTRATSLILEKSEGEHRVRRPRETPAPTGPFTIKIDRKNGGSQKMFAGTEEIPV
Ga0126381_1028802992	3300010376	Tropical Forest Soil	MLGATTILFGAFGIALKYAHPQSAADTRPTPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQ
Ga0126381_1040027391	3300010376	Tropical Forest Soil	MLGITTILFGVYGTALKNAHPQSAADSRATPLILEKNEGEHRVRRPRETPIPTGPFTIKIDRNNGGSQKM
Ga0126381_1046609661	3300010376	Tropical Forest Soil	MYGTALKDAHPQSAADSSTTPLILEKNEGEHRVRRPRETTVPTGPFTIKIDRKNGGSQKMFAGTEEIPAGGI
Ga0126383_104710772	3300010398	Tropical Forest Soil	MRFGIRILGMTGILFVVCGIATKDAHPQSAADSRTTPLILEKSEGELRVRRPRETPVPTGPFTIK
Ga0126383_123955262	3300010398	Tropical Forest Soil	MRFGLQVLTLSTILFGVYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRKNGGSQKMWLGTEEIPP
Ga0126375_108726641	3300012948	Tropical Forest Soil	MTTILFGVYGTALTDAHPQSAADSRTTPLILEKNEGEHRVRRPRETPVPTGPFTIKIDRKNGSSQKMFA
Ga0126375_115707112	3300012948	Tropical Forest Soil	MRCGLHVLSLSTILFGGYGIALNDADSQSARDTKTTPLILERSEGEHRVRKPREIPIPTGLFTIKVDREN
Ga0182035_115200942	3300016341	Soil	MRFGISMLGATTILFGAFGIALKDAHPQSAADTRATPLILEKSEGEHRVRRPRETPVPTGPFTIKID
Ga0182035_121635392	3300016341	Soil	MRFGLQVLSLSTILFSAYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKSREIPVPTGPFTIKVDRKNGGSRKMWLGTEEIPPGGII
Ga0182032_102489951	3300016357	Soil	MRFGISMLGATTILFGAFGIALKDAHPQSAADTRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGTEEIP
Ga0182032_106874701	3300016357	Soil	MRFGIRMLGMTTILFGVYGTALKDAHPQSAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGTEEIP
Ga0182039_105291221	3300016422	Soil	MRFGIRMLGMTTILFGVYGTALKDAHPQSAADSRATPLILEKSEGEHRVRRPRDTPVPTGPFTIKIDRKNGGSQKMF
Ga0182039_115221622	3300016422	Soil	MRFGISMLGATTILFGAFGIALKDAHPQSAADTRATPLILEKSEGEHRVRRPRETPVPIGPFTIKIDRKNGGSR
Ga0182038_121907731	3300016445	Soil	MRLGIRMLAITTILFGMYGTVLKDAHPQSAADSRATPLILEKDEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGTEEIPAG
Ga0126371_102389163	3300021560	Tropical Forest Soil	MRFGIRMLGITTILFGVYGTALKNAHPQSAADSRATPLILEKNEGEHRVRRPRETPIPTGPFTIKIDRNNGGSQKMF
Ga0126371_102827691	3300021560	Tropical Forest Soil	MRFRLRMMRLAAILLGTRGIARNDAHRQPAGDIKTTPLVLERNEGERRVRRPRETPIATASFTIKIDRKNGG
Ga0207692_108094191	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRFGIRMLGITAILFGVYGTALKDAHPQSAAGSRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDRKNG
Ga0207693_107886301	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRFGIRMLGITAILFGVYGTALKDAHPQSAAGSRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDRKNGGSQK
Ga0207663_110353931	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRFGIRMLGITAILFGVYGTALKDAHPQSAAGSRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEIPAGGII
Ga0207665_116677751	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRFGLQMLSLSTILFGAYGIALNDAHPQSTSDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKVDRKNGGSQKMWLGTEEIPPG
Ga0209003_10691271	3300027576	Forest Soil	MRFGIRMLGITGIIFGACGISLKDAHPQLAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEI
Ga0209799_10269761	3300027654	Tropical Forest Soil	MRFGLQVLTLSTILFGVYGIALHDVHPPSARDNTTTPLILEKSEGEHRVRKPRELPIPTGPFTIKVDRKNGGSQK
Ga0209465_100532013	3300027874	Tropical Forest Soil	MRFGLRMMSLAAILFGTYGTARNDAHPQSAGSIKTTPLMLEKSEGEHRVRRPRETPIPTASFTIKV
Ga0209382_100499751	3300027909	Populus Rhizosphere	MRFGLQVLSLSTILFGAYGIALNDAHPQSARDNKTTPLILEKSEGEHRVRKPREIPIPTGPFTIKV
Ga0209382_112646921	3300027909	Populus Rhizosphere	MRLGLRVLSLSTILFGAYGIALNDAHPQSARDNRTTPLILEKSEGERRVRKPREIPTPTGPFTIKVDRKNG
Ga0318528_101992451	3300031561	Soil	MRFGISMLGVTTILFGAFGIALKDAHPQSAADSRVTPLILEKNEGEHRVRRPRETSVPTGPFTIKIDRNNGGS
Ga0310915_111483312	3300031573	Soil	MRFGIRVLGITTILFGMYGTALKDAHPQSAADRSTTPLILEKNEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGTEEIPAGGLIPRH
Ga0318542_107123251	3300031668	Soil	MRFGIRMLGITTILFGMYSTTLKDAHPQSAADSSTTPLILEKNEGEHRVRRPRETPVPTRPFTIKIDRKNGGSQKMFAGTEEI
Ga0307469_104422641	3300031720	Hardwood Forest Soil	MRFAVRTLGMTTILFGAYSVALNNTHPQSAADTRATPLILEKNEGEHRVRRPRETPVPTGPFTIKI
Ga0307468_1009923712	3300031740	Hardwood Forest Soil	MRFGIRMLGITAILFGVYGTALKDAHPQSAAGSRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEIPAGGIIPRH
Ga0318521_100412671	3300031770	Soil	MRFGISMLGVTTILFGAFGIALKDAHPQSAADSRVTPLILEKNEGEHRVRRPRETSVPTGPFTIKIDRNNGGSQKMFAGAEEIPV
Ga0318497_103329082	3300031805	Soil	MRFGISMLGVTTILFGAFGIALKDAHPQSAADSRVTPLILEKNEGERRVRRPRETSVPTGPFTIKIDRNNGGSQKVFAGTE
Ga0307473_104001811	3300031820	Hardwood Forest Soil	MRFAVRTLGMTTILFGAYSVALNNAHPQSAADTRATPLILEKNEGEHRVRKPRETPVPTGPFTIKIDR
Ga0310917_106004142	3300031833	Soil	MRFGIRMLGITTILFGMYSTTLKDAHPQSAADSSTTPLILEKNEGEHRVRRPRETPVPTRPFTIKIDRKNGGSQKMFAGT
Ga0318512_101383541	3300031846	Soil	MRFWISMLGLITILFGAYRIAPNGGHSQTAGDTKTTPLILEKSDGEHRIRRPRETPIPTGQFTIKIDR
Ga0306919_100067781	3300031879	Soil	MRFGIRMLGMITILFSVYGTALKDAHPQSAADSWATPLILEKNEGERRVRRPRETAIPTGPFTIKIDRKNGGSQKMFA
Ga0306925_121399902	3300031890	Soil	MRFGIRMLGMTTILFGVYGTALKDAHPQSAADSRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGT
Ga0318522_102537482	3300031894	Soil	MRFGISMLGATTILFGAFGIALKDAHPQSAADSRVTPLILEKNEGEHRVRRPRETSVPTGPFTIKIDRNNGGSQK
Ga0306923_111351922	3300031910	Soil	MRFGIRVLGITTILFGMYGTALKDAHPQSAADRSTTPLILEKNEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAG
Ga0306921_109704521	3300031912	Soil	MRFGIRVLGITTILFGMYGTALKDAHPQSAADRSTTPLILEKNEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQ
Ga0306921_121637361	3300031912	Soil	MRFGIRMLAITTILFGMYGNALKDAHPQSAADTRATPLILEKNEGEHRVRRPRETPVPTGLFTIKIDRTNGGSQKMFAGTE
Ga0310912_110282502	3300031941	Soil	MRLGIRMLAITTILFGMYGTVLKDAHPQSAADSRATPLILEKDEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFVGTEEV
Ga0310910_114508862	3300031946	Soil	MRFGIRMLGITTILFGMYGSAPKDAHPQSAADTRATPLILEKNEGEHRVRRPRETPVPTGPFTIKIDRKNGGSRKMFAGTEEIPAGGLNPRHKH
Ga0318530_102770552	3300031959	Soil	MRFGISMLGVTTILFGAFGIALKDAHPQSAADSRVTPLILEKNEGEHRVRRPRETSVPTGPFTIKIDRNNGGSQKMFAGTE
Ga0310911_108488361	3300032035	Soil	MRFGIRMLGIATILFGVYGTALKDAHPRSAADSRATPLILEKDEGEHRVRRPREIPVPTGPFTIKIDRKNGGSQKMFVGT
Ga0318558_104601222	3300032044	Soil	MRFGIRVLGITTILFGMYGTALKDAHPQSAADRSTTPLILEKNEGEHRVRRPRETPVPTRPFTIK
Ga0318504_104061332	3300032063	Soil	MRFGISMLGVTTILFGAFGIALKDAHPQSAADSRVTPLILEKNEGEHRVRRPRETSVPTGPFTIKIDRNNGGSQKMFAGTEEIPVGGII
Ga0306924_100386681	3300032076	Soil	MRFWISMLGLITILFGAYRIAPNGGHSQTAGDTKTTPLILEKSDGEHRIRRPRETPVPTGQFTIKID
Ga0318518_103007661	3300032090	Soil	MRFGISMLGATTILFGAFGIALKDAHPQSAADTRATPLILEKSEGEHRVRRPRETPVPIGPFTIKIDRKNG
Ga0318577_102183902	3300032091	Soil	MRFGISMLGATTILFGAFGIALKDAHPQSAADTRATPLILEKSEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAG
Ga0307471_1024994252	3300032180	Hardwood Forest Soil	MRLELQVLSLSTILFGAYGIALNDAHPQSARDNRTTPLILEKSEGERRVRKPREIPTPTGPFTIKVDRKNGGSQKMWLGTEEIPPGGIIPRHK
Ga0310914_118856461	3300033289	Soil	MRLGIRMLAITTILFGMYGTVLKDAHPQSAADSRATPLILEKDEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGTE
Ga0318519_109289931	3300033290	Soil	MRFGIRMLGITTILFGMYGTALKDAHPQSAADSSTTPLILEKNEGEHRVRRPRETPVPTGPFTIKIDRKNGGSQKMFAGTEEI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F105642

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences