Metagenome Family F105654

Basic Information
Family ID	F105654
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	68 residues
Representative Sequence	MKTNSKSKTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASAADTAV
Number of Associated Samples	83
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.000 % of family members)
Environment Ontology (ENVO)	Unclassified (32.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.51% β-sheet: 0.00% Coil/Unstructured: 41.49%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF01425	Amidase	43.00
PF02663	FmdE	38.00
PF02686	Glu-tRNAGln	3.00
PF12627	PolyA_pol_RNAbd	1.00
PF13735	tRNA_NucTran2_2	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	43.00
COG2191	Formylmethanofuran dehydrogenase subunit E	Energy production and conversion [C]	38.00
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	3.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.00%
Host-Associated	Host-Associated	13.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.00%
Plants	Host-Associated → Plants	13.00%
Aquatic	Environmental → Aquatic	3.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.00%
Freshwater	Environmental → Aquatic → Freshwater	2.00%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.00%
Loam	Environmental → Terrestrial → Soil → Loam	16.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.00%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.00%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.00%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908006	Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIROz_04962350	2124908006	Soil	MKTRSNSKAVLALVLTITIAATGCSAQWLNIALQDLPVLTQMALNIATLVTTMASGQQTSAADTAVIRNISAQASRDLN
deeps_01791070	2199352024	Soil	MKINSKSKTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIAT
JGI11615J12901_104684812	3300000953	Soil	MKPISKSKSAHALVLAIALASAGCSTQWINIALQDLPVLTQMALNLANLVSVLASGKQASAAETAVIQNISVQ
C688J35102_1183678011	3300002568	Soil	MNLRSKLKSLLALVLALVSATTGCTSQWVNVAVQDLPVLTQMALNIATLVSTLAAGKQASTADVVVIQNIS
Ga0062385_100579642	3300004080	Bog Forest Soil	MKSNGIKAVLALTLAISLAATGCSSQWISVALADLPVLVQMALNIATFTETAQGKTISAADQATIQGISSEASKDLNLLQTLYNEYKANPSDATLQKINVAI
Ga0062387_1005752942	3300004091	Bog Forest Soil	MKSNGIKAVLALTLAISLAATGCSSQWISVALADLPVLVQMALNIATFTETAQGKTISAADQATIQGISSEASKDLNLLQTLYNEYKAN
Ga0066398_101218212	3300004268	Tropical Forest Soil	MNIRSKLKSLLALVMALITATVGCTPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASAADVAVIQNISA
Ga0066674_101779421	3300005166	Soil	MNIRSRLKSLLALVLALLSATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASG
Ga0066672_102836342	3300005167	Soil	MKLNSKSNILLILALAIAIAATGYSAQWINIALQDLPVLTQMSLNIATLVSTLASGKQASAADLAVIQNISAQASRDLNLLQ
Ga0066680_103330401	3300005174	Soil	MKLNSKSNILLILALAIAIAATGYSAQWINIALQDLPVLTQMSLNIATLVSTLASGKQASAADLAVIQNISAQASRDLNLLQTL
Ga0066679_103174361	3300005176	Soil	MNSKSKPFLALVLAILIATAGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASTGDIAVIQNISAQAS
Ga0066684_100767351	3300005179	Soil	MNSKSKPFLALVLSILIATAGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASTGDIAVIQNISAQASRDLNLL
Ga0066675_114492862	3300005187	Soil	MNAHSKSKAILALVLAISIAATGCSAQWINIALQDLPVLTQMALNIATLASAFSKQQNTADIAVIQNLSTQA
Ga0066388_1002376963	3300005332	Tropical Forest Soil	MALITATTGCTPQWINVAVQDLPVLTQMALNIATLVSTFASGKQASAADVAVIQNISAQAAVT*
Ga0066388_1010787302	3300005332	Tropical Forest Soil	MNIRSKLKSLLALVLALLTATIGCTPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASAADVAVIQNISAQASRDLNLL
Ga0070709_102721221	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNSKSKSLLALVLTIAIATTGCSTQWINIALQDLPVLTQMALNIATLAATLA
Ga0070713_1010133941	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNPHSKSKSLLALVLAISIAATGCSALWIKIALEDLPVLTQMALNI
Ga0070710_106752591	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTHSKSKCLLALVLAIAIATTGCSSQWINIALQDLPVLTQMALNI
Ga0070711_1020049442	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKLKSKSKSLLAAVLAITIATTGCSAQWINIALQDLPVLTQMALNIATLVSALVSGQQAN
Ga0070707_1001537702	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNPNSKSKPLLALVLAITVAATGCSAQWISLALQDLPVLTQMALNVATLVSTLVSGPQARR*
Ga0070707_1001604622	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLTQMALNVATLVSALASEKQASSADVAVI*
Ga0070707_1009502022	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNPNSKSKTLLALVLAIPIAATGCSAQWISLALQDLPVLTQMALNVATLVSTLASGPQASAADVAVIQNVSAQASRDLSLLQSLY
Ga0066698_109616871	3300005558	Soil	MKLRSKLKSLLALVLALVTATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASTADVAVIQNISAQASRDLNL
Ga0066670_102878721	3300005560	Soil	MKTNSKSKTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASAADTAV
Ga0066693_102111732	3300005566	Soil	MNLRSKLKSPLALVLALVSATTGCTSQWVNVAVQDLPVLTQMALNIATLVSTLA
Ga0066705_102084224	3300005569	Soil	MKLNFRSKSLLAVVLAISIAATGCSAQWINIALQDLPVLTQMSLNIATLVSAFASGKQANPGDV
Ga0066705_108972491	3300005569	Soil	MNSKSKPFLALVLSILIATAGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASTGDIAVIQNISAQASR
Ga0066702_102501061	3300005575	Soil	MKTNSKSKTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASAADTAVIQNISAQ
Ga0066702_102746233	3300005575	Soil	MKSNSRLKVLFAVVLAASIVITGCSGQWINLALQDLPVLTQMALNIATLASTLASGQQANSGDVAVIQNISAQASRDLSLLQ
Ga0066708_100871271	3300005576	Soil	MNICSRLKSLLALVLALLSATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASVAD
Ga0068854_1004576982	3300005578	Corn Rhizosphere	MLSRSKSLLVLVLAITLAATGCSAQWINIALQDLPVLTQMALNIATLVSALASG
Ga0068854_1019503631	3300005578	Corn Rhizosphere	MHFKFKSLLPLVLAFSITLTACSSQWITIALQDLPVLTQMALNIATLAGTFSRQQNTADLAVIQNISAQ
Ga0070740_100837023	3300005607	Surface Soil	MKIDSKSKPFLALALAIAIAATGCSAEWINVALQDLPVLTQMALNIATLVT
Ga0070740_101667572	3300005607	Surface Soil	MKINSKSKPILALVLAIAIAATGCSAQWINIALQDLPVLTQMALNIATLVTTL
Ga0068856_1000994184	3300005614	Corn Rhizosphere	MLSRSKSLLVLVLAITLAATGCSAQWINIALQDLPVLTQMALNIATLVSALASGQQANP
Ga0068856_1006059501	3300005614	Corn Rhizosphere	MHFKFKSLLPLVLAFSITLTACSSQWITIALQDLPVLTQMALNIATL
Ga0068856_1014630642	3300005614	Corn Rhizosphere	MNSKSKSLLALVLTIAIATTGCSTQWINIALQDLPVLTQMALNIATLAA
Ga0068852_1002248001	3300005616	Corn Rhizosphere	MHAYSNAHSKFKPLLALVLAMAIATTACSPNWINIALQDLPVLTQMALNIATLASTFSPQQNPADLAVIQNISGQ
Ga0066696_100171011	3300006032	Soil	MNLRSKLKSLLALVLALVSATTGCTSQWVNVAVQDLPVLTQMVLNIATLVSTLAAGKQA
Ga0066652_1006955963	3300006046	Soil	MNIRSKLKSLLALVLALLSATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASVADIA*
Ga0070712_1000573971	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKTHSKSKSVLALVLAISIAATGCSAQWIKIALQDLPVLTQMALNIAA
Ga0075436_1008833011	3300006914	Populus Rhizosphere	MHFKFKSLLPLVLAFSITLTACSSQWITIALQDLPVLTQMALNIATLAGTFSRQQNTADLAVIQNISAQASRDLNLLLTL
Ga0099829_100531193	3300009038	Vadose Zone Soil	MENTMTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLAQMALNVAMLASTLASGKQASSADVAVIQNISAQASPT*
Ga0066709_1011800111	3300009137	Grasslands Soil	MKPNFKSKSLLALVLAITIATAGCSAQWINIALQDLPVLTQMALNIATLVSAFASGKQANPGDVAVIQNISAQASRDLNLLQS
Ga0066709_1017726332	3300009137	Grasslands Soil	MMKLRSKLKSLLALVLALLTATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASVANVAVIQNIPSQASRDLNLLQTLYNEYKANPSSA
Ga0066709_1025165601	3300009137	Grasslands Soil	MKLNFRSKSLLAVVLAISIAATGCSAQWINIALQDLPVLTQMSLNIATLVSAFASGKQANPGDVAVIQNISAQASRDLNLLQS
Ga0066709_1027732821	3300009137	Grasslands Soil	MTINFKSKTFLALALAIALAATGCSAQWLNTALQDLPVLTQMALNIATLVSTLAAGQQASAADTA
Ga0134082_102137042	3300010303	Grasslands Soil	MNLRSKLKSPLALVLALVSATTGCTSQWVNVAVQDLPVLTQMALNIATLVSTLAAGKQASTGDVAVIQNISTQV
Ga0134063_103034422	3300010335	Grasslands Soil	MKLNFRSKSLLAVVLAISIAATGCSAQWIIIALQDLPVLTQMSLNIATLVSAFASGKQAN
Ga0134062_107699931	3300010337	Grasslands Soil	MNIRSKLKSLLALVLALLSATTGCSPQWINVAVQDLPVLTRMALNIATLVSTLASGKQASVADIA*
Ga0126370_119011511	3300010358	Tropical Forest Soil	MNLRSKLKSLLALVLALLTATIGCTPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASTADVAA
Ga0126376_109300652	3300010359	Tropical Forest Soil	MTSTSKSLLAFVLALAIAATACSAQWINVALQDLPVLTQMALDIATLVSSMASGKQANPADLAVIQNISTQAS
Ga0126372_118633312	3300010360	Tropical Forest Soil	MNLRSKLKSLLALVLALLSATIGCTPQWINVAVQDLPVLTQMALNIATLVSTLAAGKQASTADVATIQNISAQASRDLNLLQ
Ga0134125_111843552	3300010371	Terrestrial Soil	MNSKSKTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASAADTAVIQNISAQSSRDLNLLQTLYNEYKATP
Ga0134125_124329092	3300010371	Terrestrial Soil	MKINSKSKTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVTTLAAGQ
Ga0105239_131800282	3300010375	Corn Rhizosphere	MLSRSKSLLVLVLAITLAATGCSAQWINIALQDLPVLTQMALNIAT
Ga0134126_100851556	3300010396	Terrestrial Soil	MEKTMKTDSKSKILLALVLAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASAADTAVIQNISAQASRDLNLLQTLYN
Ga0134124_101587763	3300010397	Terrestrial Soil	MNSKSKSLLALVLTIAIATTGCSTQWINIALQDLPVLTQMALNIATLAATLASGNQANTADVAVIQNISAQASRDL
Ga0137392_115982201	3300011269	Vadose Zone Soil	MENTMTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLAQMALNVAML
Ga0137393_100221483	3300011271	Vadose Zone Soil	MTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLAQMALNVAMLASTLASGKQASSADVAVIQNISAQASPT*
Ga0137388_101562272	3300012189	Vadose Zone Soil	MENTMTTHSKSRIVLAFVLAIMIAATGCSAQRINLALQDLPVLAQMALNVAMLASTLASGKQASSADVAVIQNISAQASPT*
Ga0137383_104160551	3300012199	Vadose Zone Soil	MENTMTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLAQM
Ga0137377_110000832	3300012211	Vadose Zone Soil	MNIRSRLKSLLALMLALLIATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASVADVAVIQNISSQA
Ga0137377_110485061	3300012211	Vadose Zone Soil	MTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLTQMALNVATLVSALASEKHASSADV
Ga0137387_102116543	3300012349	Vadose Zone Soil	MENTMTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLAQMALNVAMLASTLASGKQASSADVAVIQNISAQASRA*
Ga0137366_103426752	3300012354	Vadose Zone Soil	MTNDENLSIQSVEENMNPHSKSKSLLALVLAITIAATGCSAQWINIALQDLPVLTRMALNIATLVGTLATGKQTNNADLAVVQNISAQA
Ga0137366_110584201	3300012354	Vadose Zone Soil	MTIHSKSKAILALVLAIAIAATGCSAQWINIALQDLPVLTQMALTIATLAST
Ga0137371_111969972	3300012356	Vadose Zone Soil	MMKLRSKLKSLLALVLALLTATTGCTPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASAADVAVIQNISAQASRDLN
Ga0137385_1000811510	3300012359	Vadose Zone Soil	MTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLAQMALNVAMLASTLASGKQASSADVAVIQNISAQASRA*
Ga0137360_106311202	3300012361	Vadose Zone Soil	MNIRSRLKSLLALVLALLTATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASVADVAVIQNISSQASRDLNLLQ
Ga0134110_105176801	3300012975	Grasslands Soil	VLAISIAATGCSAQWINIALEDLPVLTQMTLSIATLVSALASGKQANPGDVAVIQNIS
Ga0134087_106865692	3300012977	Grasslands Soil	MNLRSKLKSLLALVLALVSATTGCTSQWVNVAVQDLPVLTQMALNIATLVSTLAAGKQASTADVAVIQNISAQASRDLNLLQSLYNE
Ga0164306_118788701	3300012988	Soil	MKTHSKSKALLALALAISLGATGCSAQWINVALQDLPVLTQMALNIATLVSTLAAGNQANAGDVAVIQNIS
Ga0157370_108120111	3300013104	Corn Rhizosphere	MHSKFKSLLALVLATSMATTACSPQWINIALQDLPVLTQMALNIAT
Ga0157369_119968362	3300013105	Corn Rhizosphere	MEKTMKTDSKSKILLALVLAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQ
Ga0134079_100693281	3300014166	Grasslands Soil	MNLRSKLKSLLALVLALVSATTGCTSQWVNVAVQDLPVLTQMALNIATLVSTLAAGKQASTGDV
Ga0066655_114000532	3300018431	Grasslands Soil	MKTNSKSNTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAG
Ga0066667_123342071	3300018433	Grasslands Soil	MKLNFRSKSLLAVVLAISIAATGCSAQWINIALQDLPVLTQMSLNIATLVSAF
Ga0066669_116814282	3300018482	Grasslands Soil	MNIRSKLKSLLALVLALLSATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASVADIA
Ga0193751_10689353	3300019888	Soil	MNSKSKAFLALVLAIAIAATGCSAQWINIALQDLPVLTQMALNIATLVSALASGQQASTADIAVIQNISAQASRDLNLLQTPYNEYKAN
Ga0210402_109030302	3300021478	Soil	MNPHSKSKILLALVLAISLAATGCSAQWVNLALQDLPVLTSMALTIATL
Ga0212123_109259951	3300022557	Iron-Sulfur Acid Spring	MNPHSKSKIFLALVLAISIAATGCSAQWVNLALQDLPVLTQMALNIATVVSTLASGQQASAADTAVIQNISAQASRDLNLLQSLYGEYRA
Ga0207671_103917823	3300025914	Corn Rhizosphere	MNSKSKTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASAA
Ga0207663_105012532	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKTHSKSKCLLALVLAIAIATTGCSSQWINIALQDLPVLTQMALNIATLAATLASGNQVSTADVAVIQNISAQASRDLNLLQTLY
Ga0207663_112783161	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKLKSKSKSLLAAVLAITIATTGCSAQWINIALQDLPVLTQMALNIATLVSALVSGQQANPG
Ga0207646_101373973	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTTHSKSRIVLAFVLAIMIAATGCSAQWINLALQDLPVLTQMALNVATLVSALASEKQASSADVAVI
Ga0207646_109435932	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNPNSKSKTLLALVLAIPIAATGCSAQWISLALQDLPVLTQMALNVATLVSTLASGPQASAADV
Ga0207667_110006271	3300025949	Corn Rhizosphere	MLSRSKSLLVLVLAITLAATGCSAQWINIALQDLPVLTQ
Ga0207702_112167701	3300026078	Corn Rhizosphere	MNIRSKLKSLLALVLALLTATIGCTPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASAA
Ga0209266_12518381	3300026327	Soil	MNIRSRLKSLLALVLALLSATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASAADVP
Ga0257165_10475281	3300026507	Soil	MNPHSKSKTFLALVLAITIAATGCSSQWINIALQDLPVLTQMAPNIAVVV
Ga0209161_102035942	3300026548	Soil	MNICSRLKSLLALVLALLSATTGCSPQWINVAVQDLPVLTQMALNIATLVSTLASGKQASAADVAV
Ga0209581_11485342	3300027706	Surface Soil	MKIDSKSKPFLALALAIAIAATGCSAEWINVALQDLPVLTQMALNIA
Ga0209074_104090491	3300027787	Agricultural Soil	MHFKFKSLLPLVLAFSITLTACSSQWITIALQDLPVLTQMALNIATLAGTFSRQQNTADLAVIQNISAQASRDLNLLLTLYNEYKA
Ga0209580_102853642	3300027842	Surface Soil	MNSKSKALIALVLAITIAATGCSAQWINIALQDLPVLTQMALNIAPLVTALATGKQASTGDVAVIQNISAQASRDLNLLQTLY
Ga0257175_11283301	3300028673	Soil	MARCGKRPTTNDCLSGENMNPNSKSKTLLALVLAITIAATGCSAQWVNLALQDLPVLTQMALNIATLVSTLASGNQASAADTAVIQNISAQASRDLNLL
Ga0170823_140430151	3300031128	Forest Soil	MKTHSKSKCLLALVLAIAIAATGCSTQWINIALQDLPVLAQMALNIATLVGTLASGQQVSAADTAVIQNIS
Ga0310813_100577414	3300031716	Soil	MLSRSKSLLVLVLAITLAATGCSAQWINIALQDLPVLTQMALNIATLVSALASGQQAN
Ga0307469_109202521	3300031720	Hardwood Forest Soil	MNSKSKTLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASAADTAFIQNISAQASRDLNLLQTLYNEYN
Ga0308175_1029318811	3300031938	Soil	MKINSKSKVLLALALAIALAATGCSAQWINTALQDLPVLTQMALNIATLVSTLAAGQQASAADNAVIQNISAQASRDLNLLQTLYNEYKASPSS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F105654

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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