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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105784 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 74 residues |
| Representative Sequence | RFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLIERRQIVAQIFKDHPPAPSP |
| Number of Associated Samples | 86 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 74 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.44 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (50.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (62.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 18.09% β-sheet: 20.21% Coil/Unstructured: 61.70% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.44 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF00817 | IMS | 63.00 |
| PF11799 | IMS_C | 24.00 |
| PF13180 | PDZ_2 | 4.00 |
| PF17070 | Thx | 3.00 |
| PF13365 | Trypsin_2 | 2.00 |
| PF00072 | Response_reg | 1.00 |
| PF01878 | EVE | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG0389 | Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair | Replication, recombination and repair [L] | 63.00 |
| COG1673 | Predicted RNA-binding protein, contains PUA-like EVE domain | General function prediction only [R] | 1.00 |
| COG2947 | Predicted RNA-binding protein, contains EVE domain | General function prediction only [R] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 24.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 19.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 18.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 13.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 10.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.00% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 2.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 2.00% |
| Visualization |
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| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm | Environmental | Open in IMG/M |
| 3300002562 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm | Environmental | Open in IMG/M |
| 3300002908 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm | Environmental | Open in IMG/M |
| 3300002911 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm | Environmental | Open in IMG/M |
| 3300005172 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 | Environmental | Open in IMG/M |
| 3300005174 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 | Environmental | Open in IMG/M |
| 3300005175 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005187 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 | Environmental | Open in IMG/M |
| 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005451 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005556 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 | Environmental | Open in IMG/M |
| 3300005566 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 | Environmental | Open in IMG/M |
| 3300005586 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 | Environmental | Open in IMG/M |
| 3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
| 3300006791 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 | Environmental | Open in IMG/M |
| 3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
| 3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
| 3300010304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015 | Environmental | Open in IMG/M |
| 3300010320 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015 | Environmental | Open in IMG/M |
| 3300010323 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
| 3300010325 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG | Environmental | Open in IMG/M |
| 3300010329 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015 | Environmental | Open in IMG/M |
| 3300010333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
| 3300010335 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015 | Environmental | Open in IMG/M |
| 3300010336 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015 | Environmental | Open in IMG/M |
| 3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300012373 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012399 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
| 3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
| 3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012972 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300012976 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG | Environmental | Open in IMG/M |
| 3300014154 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015 | Environmental | Open in IMG/M |
| 3300015054 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300015241 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015358 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300017657 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015 | Environmental | Open in IMG/M |
| 3300017659 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
| 3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
| 3300020199 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
| 3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
| 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026296 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026301 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026305 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes) | Environmental | Open in IMG/M |
| 3300026307 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes) | Environmental | Open in IMG/M |
| 3300026310 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026313 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026316 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes) | Environmental | Open in IMG/M |
| 3300026528 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes) | Environmental | Open in IMG/M |
| 3300026537 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes) | Environmental | Open in IMG/M |
| 3300027633 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027669 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300028878 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117 | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI25385J37094_100471411 | 3300002558 | Grasslands Soil | LRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYNLTERRQIVAQIFKDHPPAPSP* |
| JGI25382J37095_101089952 | 3300002562 | Grasslands Soil | NDGTIRWELHLVRFRGDTLAVQQGDSTLRFPVMQVDELRLVRKAERRQAAEPNRYGGVLGGADDEVYRLTLYDLAERRQIVAQIFKDHTPAPSP* |
| JGI25382J37095_101105852 | 3300002562 | Grasslands Soil | ELHLVRFRGDTLAVQQGDSTLRFPVMQVDELRLVRKAERRQAAEPNRYGGVLGGADDEVYRLTLYDLAERRQIVAQIFKDHTPAPSP* |
| JGI25382J43887_101518991 | 3300002908 | Grasslands Soil | VVQHDDSVLRFPIHQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYNLTERRQIVAQIFKDHPPAPSP* |
| JGI25390J43892_101273122 | 3300002911 | Grasslands Soil | PNRYGGVLGGADDEVFRLTLYNLAERREIVAQIFKDHPAAPSP* |
| Ga0066683_108932612 | 3300005172 | Soil | RFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLIERRQIVAQIFKDHPPAPSP* |
| Ga0066680_105368681 | 3300005174 | Soil | VRKAERRQTNEPNRYGGVLGGADDEAFRLTLYDLAERRQILAQIFKDHPPAPSP* |
| Ga0066673_105441492 | 3300005175 | Soil | LVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLTERRQIVAQIFKDHPPAPSP* |
| Ga0066676_101523721 | 3300005186 | Soil | ELHFVRFRGDTLVVQQSDSTFRFPINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQIVAQIFQDHPPASP* |
| Ga0066675_104509842 | 3300005187 | Soil | PVMQVDELRLVRKAERRQAAEPNRYGGVLGGADDEVYRLTLYDLAERRQIVAQIFKDHTPAPSP* |
| Ga0070703_104320171 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | QQGDSVLRFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYNLTERRQIVAQILKDHPPAPSP* |
| Ga0070714_1002783391 | 3300005435 | Agricultural Soil | TPEPDRYGGVLNGADDEIYRLTLYSLPERREIIGKIFKDHPPPSPDSR* |
| Ga0070705_1008809812 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MTLNDGRIFWDLHLVRFRGDTLAVQQGDSTFRFPITQVDELRLVQKAERRQTNEPNRYGGVLGGGDDVAFRLTLYNLVERRQILAQILKDHPPAPSP* |
| Ga0066681_107697152 | 3300005451 | Soil | RRQTPEPNRYGGVLGGADDEVFRLTLYSLTERRQIVAQIFKDHPPAPSP* |
| Ga0070707_1021653722 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | TNEPNRYGGVLGGGDDVAFRLTLYNLVERRQILAQIFKDHPPAPSP* |
| Ga0070698_1017757122 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | FPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYNLTERRQIVAQILKDHPPAPSP* |
| Ga0070697_1008815112 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | DSTLRFPISQVDELRLVRKAERRQTNEPNRYGGVLGGGDDEAFRLTLYDLAERRQILAQIFKDHPPAPSP* |
| Ga0070696_1002967511 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | RQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQILAQIFKDHPPAPSP* |
| Ga0066707_107025182 | 3300005556 | Soil | QLTLNDGTIRWELHLIRFRGDTLAVQQGDSTLRFPVMQVDELRLVRKAERRQAAEPNRYGGVLGGADDEVYRLTLYDLAERRQIVAQIFKDHTPAPSP* |
| Ga0066707_109779381 | 3300005556 | Soil | NNGTIIWELHLVRLAGDTLVLRHGDSTYSFPISQVDELRLVQKSVRHQTPEPNRYGGVLGGADDEVYRLTLYSLGERRAILAQVFKSHPPEKSP* |
| Ga0066693_100239521 | 3300005566 | Soil | AEPNRYGGVLGGADDEVFRLTLYDLAERRQIVAQIFQDHPPASP* |
| Ga0066691_107701602 | 3300005586 | Soil | VRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQIVAQIFQDHPPASP* |
| Ga0066656_107799022 | 3300006034 | Soil | VRFRGDTLVVQQGDSTFRFPISRVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQIVAQIFQDHPPASP* |
| Ga0070716_1000457761 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | ITLNDGKILWELHLVRFRGDTLVVQQGDSSFRFPINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQILAQILKDHPPAPSP* |
| Ga0079222_102591642 | 3300006755 | Agricultural Soil | DSTYRFPLSQLDELRLVVKAERHQTPEPDRYGGVLNGADDEIYRLTLYSVPERRDILAKIFKDHPPPSPGSR* |
| Ga0079222_118903202 | 3300006755 | Agricultural Soil | DSTYRFPLSQLDELRLVVKAERHQTPEPDRYGGVLNGADDEIYRLTLYSLPERREIIGKILKDHPPPSPDSR* |
| Ga0066653_100565951 | 3300006791 | Soil | GDSTFRFPISQVDELRLVRKAERRQTAQPNRYGGVLGGADDEVFRLTLYNLAERREIVAQIFQDHPPASP* |
| Ga0066665_105197872 | 3300006796 | Soil | ERRQTPEPNRYGGVLGGADDEVFRLTLYSLTERRQIVAQIFKDHPPAPSP* |
| Ga0066665_116452911 | 3300006796 | Soil | HLVRFRGDTLVVQQGDSVRRFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYDLTERRQIVAQIFKDHPPAPSP* |
| Ga0066659_117813442 | 3300006797 | Soil | NQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLIERRQIVAQIFKDHPPAPSP* |
| Ga0079221_104507042 | 3300006804 | Agricultural Soil | LTLRGSDSTYRFPIGRVDELRLVVKSVRRQTAEPNRYGGVLGGTDDEVYRLTLYSVPERRAILEQVFKDHPPTPPTPSPGSR* |
| Ga0099827_107513422 | 3300009090 | Vadose Zone Soil | RFRGDTLVVQQGDSTFRFPINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQILAQIFQDHPPAPSP* |
| Ga0134088_103710062 | 3300010304 | Grasslands Soil | LNDGRILWDLHLVRFRGDTLVVQQGDSTFRFQINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYNLVERRQIVAQIFKDHPAAPSP* |
| Ga0134109_101111582 | 3300010320 | Grasslands Soil | VRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLTERRQIVAQIFKDHPPAPSP* |
| Ga0134086_100309281 | 3300010323 | Grasslands Soil | LHLVRFRSDTVVVQQGDSTFRFPISQVDELRLVRKAERRQTAQPNRYGGVLGGADDEVFRLTLYNLAERREIVAQIFKDHPAAPSP* |
| Ga0134064_102156852 | 3300010325 | Grasslands Soil | RLVRFRGDTLVVQQGDSTFRFPISRVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQIVAQIFQDHPPASP* |
| Ga0134111_100680002 | 3300010329 | Grasslands Soil | LVELDEVRLVQKSTRHITPEPGRYGGVLGGADDEVHRLTLFTLAERRDILQQIFKDHPPGKGP* |
| Ga0134111_101050692 | 3300010329 | Grasslands Soil | VRKAERRQTAEPNRYGGVLGGADDEVFRLTLYNLAERREIVAQIFQDYPAAPSP* |
| Ga0134080_106682371 | 3300010333 | Grasslands Soil | AERRQTPEPNRYGGVLGGADDEVFRLTLYSLIERRQIVAQIFKDHPPAPSP* |
| Ga0134063_102286431 | 3300010335 | Grasslands Soil | LNGGRILWELHLVRFRGDTLVVQQGDSVRRFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYDLTERRQIVAQIFKDHPPAPSP* |
| Ga0134071_100059911 | 3300010336 | Grasslands Soil | FALPLTQFDELRLVKKATRHVTPEPGRYGGVLGGADDEVYRLTLYTLAERRDILQQILKDHPPEAGP* |
| Ga0137392_102197731 | 3300011269 | Vadose Zone Soil | LAVQQGDSTFRFPITQIDELRLVRKAERRQTNEPNRYGGVLGGADDEAFRLTLYDVAERRQILAQIFKDHPPAPSP* |
| Ga0137388_103618282 | 3300012189 | Vadose Zone Soil | LNDGRILWELHLVRFRGDTLVVQQGDSVLRFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYNLTERRQIVAQILKDHPPAPSP* |
| Ga0137383_107365711 | 3300012199 | Vadose Zone Soil | VQQGDSVLRFPIHQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYTLTERRQIVAQIFKDHPPAPSP* |
| Ga0137363_113019991 | 3300012202 | Vadose Zone Soil | TAEPNRYGGVLGGSDDEVFRLTLYNLVERRQIVAQIFKDHPPAPSP* |
| Ga0137399_103469982 | 3300012203 | Vadose Zone Soil | TAEPNRYGGVLGGADDEVFRLTLYDLAERRQILTQIFEDHPPAPSP* |
| Ga0137380_101267783 | 3300012206 | Vadose Zone Soil | FPISQVDELRLVQKSVRHQTPEPNRYGGVLGGADDEVYRLTLYNLGERRAILAQVFKSHPPEKSP* |
| Ga0137381_102432073 | 3300012207 | Vadose Zone Soil | SVRHQTPEPNRYGGVLGGADDEVYRLTLYNLGERRAILAQVLKSHSPEKSP* |
| Ga0137381_107933232 | 3300012207 | Vadose Zone Soil | SQVDELRLVQKSVRHQTPEPNRYGGVLGGADDEVYRLTLYSLGERRAILAQVFKSHPPEKSP* |
| Ga0137381_116533311 | 3300012207 | Vadose Zone Soil | LVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYTLTERRQIVAQIFKDHPPAPSP* |
| Ga0137387_100842504 | 3300012349 | Vadose Zone Soil | HLVRFRGDTLVVQQGDSTFRFPIGQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYNLAERRQIVAQIFQDHPPASP* |
| Ga0137390_100854617 | 3300012363 | Vadose Zone Soil | VRFRGDTLVVQQGDSVLRFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYNLTERRQIVAQILKDHPPAPSP* |
| Ga0137390_108790771 | 3300012363 | Vadose Zone Soil | WDLHLVRFRGDTLAVQQGDSTFRFPITQVDELRLVRKAERRQTNEPNRYGGVLGGADDEAFRLTLYDLAERRQILAQIFKDHPPAPSP* |
| Ga0134042_11412373 | 3300012373 | Grasslands Soil | VLHGDSVLRFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLIERRQIVAQIFKDHPPAPSP* |
| Ga0134061_12796621 | 3300012399 | Grasslands Soil | MWDLRLVRLTGDTLVLRQGTGDSTYRFPIGRVDELRLVHKAERRLRGEPRGYGSVLAGTDDEMYRLTLYSVSERRQIIERVFKDHPPDGASSDLW |
| Ga0137373_111100161 | 3300012532 | Vadose Zone Soil | DTLVVRHADSTFVFTIGQLDELRLVQKSKRSITPEAGRYGGVLGGADDEVYRLTLYDLAERRQILQQVFQDHPPQASP* |
| Ga0137358_108896581 | 3300012582 | Vadose Zone Soil | NDGTIIWELHLVRFRDDTLVVQQRDSTLRFPIAQVDELRLVRKAERRQTAEPNRYGGVLGGSDDEVFRLTLYNLVERRQIVAQIFKDHPPAPSP* |
| Ga0137396_104616342 | 3300012918 | Vadose Zone Soil | FRGDTLAVQQGDSTFRFPITQVDELRLVRKAERRQTNEPNRYGGVLGGADDEAFRLTLYDLAERRQILAQIFKDHPPAPSP* |
| Ga0137419_114553351 | 3300012925 | Vadose Zone Soil | LVRYRGDTLAVQQGDSTFRFPINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYSLAERRQILAQIFKDHPPPPSP* |
| Ga0137419_119876241 | 3300012925 | Vadose Zone Soil | TAEPNRYGGVLGGADDEVFRLTLYDLTERRQILAQIFKDHPPAPSQ* |
| Ga0137404_122700442 | 3300012929 | Vadose Zone Soil | TVRFPIMQVDELRLVRKAERRQAAEPNRYGGVLGGADDEVYRLTLYDLAERRQIVAQIFKDHTPAPSP* |
| Ga0134077_104186491 | 3300012972 | Grasslands Soil | LNDGRILWELHLVRFRGDTLVVQQGDSVLRFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLIERRQIVAQIFKDHPPAPSP* |
| Ga0134076_101484891 | 3300012976 | Grasslands Soil | LNDGRILWELHLVQLRGATLIVQQGDSTVRFPIGQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYNLAERRQIVAQIFQDHPPASP* |
| Ga0134075_100546571 | 3300014154 | Grasslands Soil | QITLNDGRILWELHLVRLRGDTLVVQQGDSTFRFPISRVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQIVAQIFQDHPPASP* |
| Ga0134075_101220801 | 3300014154 | Grasslands Soil | RGDTLVVQQGDSTFRFQINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYNLVERRQIVAQIFKDHPPAPSP* |
| Ga0134075_103908792 | 3300014154 | Grasslands Soil | RLEHDTLVLARADSTYRFPIMYVDELRLVRKSERRQTAEANRYGGVLGGVDDEVYRLTLYNRSERRGILEQLFKDHPPPASP* |
| Ga0137420_13132775 | 3300015054 | Vadose Zone Soil | VADDAHDGRILWDLHLVRFRGDTLAVQQGDSTFRSPSLRWTSCACAEGRAAPDHEPNRYGGVLGGADDEAFRLTLYDLAERRQILAQILRTIRRAVP* |
| Ga0137418_111755841 | 3300015241 | Vadose Zone Soil | FPINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYNVAERRQILAQIFKDHPPAPSP* |
| Ga0134089_105165441 | 3300015358 | Grasslands Soil | DSTYRFPIMYVDELRLVRKSERRQTAEANRYGGVLGGVDDEVYRLTLYNRSERRGILEQLFKDHPPPASP* |
| Ga0134074_14105971 | 3300017657 | Grasslands Soil | DGRILWELHLVRFRGDTLVVQQGDSTFRFPIRQVDELRLVRKAERRQTAEPNRYGGVLGGADDQVFRLTLYDLAERRQIVAQIFQDHPPASP |
| Ga0134083_105281912 | 3300017659 | Grasslands Soil | ERRQTPEPNRYGGVLGGADDEVFRLTLYNITERRQIVAQIFKDHPPAPSP |
| Ga0066667_118672001 | 3300018433 | Grasslands Soil | KAERRQTPEPNRYGGVLGGADDEVFRLTLYDLTERRQIVAQIFKDHPPAPSP |
| Ga0066662_121722502 | 3300018468 | Grasslands Soil | NDGTIFWELHLVRFRGDTLAVQQGDSTLRFPIKLVDELRLVRKAERRQAAEPNRYGGVLGGSDDEVYRLTLYDLAERRQIVAQIFKDHTPAPSP |
| Ga0179592_100911602 | 3300020199 | Vadose Zone Soil | NDGRILWDLHLVRFRGDTLAVQRGDSTFRFPITQVDELRLVRKAERRQTNEPNRYGGVLGGADDEAFRLTLYDLVERRQILAQIFKDHPPAPSP |
| Ga0179596_103790241 | 3300021086 | Vadose Zone Soil | QVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYNLTERRQIVAQILKDHPPAPS |
| Ga0210404_102523182 | 3300021088 | Soil | FPITQVDELRLVQKAERRQPNEPNRYGGVLGGGDDVAFRLTLYNVVERRQILAQIFKDHPPAPSP |
| Ga0210408_103673361 | 3300021178 | Soil | GRILWDLHLVRFRGDTLAVQQGDSTLRFPITQVDELRLVQKAERRQTNEPNRYGGVLGGGDDVAFRLTLYNVVERRQILAQIFKDHPPAPSP |
| Ga0207653_100061575 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | PNRYGGVLGGGDDVAFRLTLYNLVERRQILAQILKDHPPAPSP |
| Ga0207646_110728593 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MTLNDGRIFWDLHLVRFRGDTLAVQQGDSTFRFPITQVDELRLVQKAERRQTNEPNRYGGVLGGGDDVAFRLTLYNLVERRQILAQILKDHPPAPSP |
| Ga0207664_111829201 | 3300025929 | Agricultural Soil | MHGDTLVARHADSTYRFPLSQLDELRLVVKAERHQTPEPDRYGGVLNGADDEIYRLTLYSVPERRDIIAKIFKDHPPPSPGSR |
| Ga0207665_100019045 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MTLNDGRIFWDLHLVRFRGDTLAVQQGDSTLRFPINQVDELRLVRKAERRQTNEPNRYGGVLGGGDDVAFRLTLYNLVERRQILAQILKDHPPAPSP |
| Ga0209235_10561281 | 3300026296 | Grasslands Soil | EGDSTFRFPVTQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYNLTERRQIVAQIFKDHPPAPSP |
| Ga0209235_12782512 | 3300026296 | Grasslands Soil | GTIFWELHLVRFRGDTLAVQQGDSTLRFPIKLVDELRLVRKAERRQAAEPNRYGGVLGGSDDEVYRLTLYDLAERRQIVAQIFKDHTPAPSP |
| Ga0209238_10180694 | 3300026301 | Grasslands Soil | LVRFRGDTLAVQQGDSTLRFPIKLVDELRLVRKAERRQAAEPNRYGGVLGGSDDEVYRLTLYDLAERRQIVAQIFKDHTPAPSP |
| Ga0209688_10228521 | 3300026305 | Soil | TLVVQQGDSVLRFPIHQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLTERRQIVAQIFKDHPPAPSP |
| Ga0209469_11151481 | 3300026307 | Soil | PINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLIERRQIVAQIFKDHPPAPSP |
| Ga0209239_10791571 | 3300026310 | Grasslands Soil | PEPNRYGGVLGGADDEVFRLTLYSLTERRQIVAQIFKDHPPAPSP |
| Ga0209239_13147892 | 3300026310 | Grasslands Soil | RILWELHLVRFRGDTLVVQQGDSVRRFPINQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYDLTERRQIVAQIFKDHPPAPSP |
| Ga0209761_12492142 | 3300026313 | Grasslands Soil | PIHQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQILAQIFKDHPPAPSP |
| Ga0209155_10172481 | 3300026316 | Soil | TPEPNRYGGVLGGADDEVFRLTLYSLTERRQIVAQIFKDHPPAPSP |
| Ga0209155_10632842 | 3300026316 | Soil | TYAFPLAQVDEIRLVQKSTRHITPEAGRYGGVLGGVDDEVHRLTLYSVPERRAIVQQVLQAHPPP |
| Ga0209378_10347554 | 3300026528 | Soil | DGRILWELHLVRFRGDTLVVQQGDSVLRFPIHQVDELRLVRKAERRQTPEPNRYGGVLGGADDEVFRLTLYSLTERRQIVAQIFKDHPPAPSP |
| Ga0209157_13470691 | 3300026537 | Soil | FRGDTLVVQQGDSTFRLPIRQVDELRLVRKAERRQTAEPNRYGGVLGGADDQVFRLTLYDLAERRQIVAQIFQDHPPASP |
| Ga0208988_11682971 | 3300027633 | Forest Soil | LGDGKIIWELRLARFRGDTLAVQQGDSMLRFPINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQIVAQIFKDHPPAPSP |
| Ga0208981_10381072 | 3300027669 | Forest Soil | MTLNDGRILWDLHLVRFRGDTLAVQQGDSTFRFPIPQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQIVAQIFKDHPPAPSP |
| Ga0209590_106255851 | 3300027882 | Vadose Zone Soil | RILWELHLVPYRGDSLVVQQGDSTFRFPISQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYNLTERRQILAQIFKDHPPAPSP |
| Ga0307302_101290611 | 3300028814 | Soil | RLQGDTLVVRDADSTYRFPIGHVDELRLVRKSERRQTAEPNRYGGVLGGADDAVYRLTLYSVSERRQLLEQVLKDHPPAASP |
| Ga0307278_101013452 | 3300028878 | Soil | ELRLVRKSERRQTAEPNRYGGVLGGADDAVYRLTLYSVSERRQLLEQVLKDHPPAASP |
| Ga0307479_108345112 | 3300031962 | Hardwood Forest Soil | FPIAQVDELRLVQKSVRHQTAEPGRYGGVLGGTDDLVYKLTLYSVSERRQIVEQLFKDHPPEDAASPP |
| Ga0307472_1002459852 | 3300032205 | Hardwood Forest Soil | FRFPINQVDELRLVRKAERRQTAEPNRYGGVLGGADDEVFRLTLYDLAERRQILAQILKDHPPAPSP |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |