NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105810

Metagenome Family F105810

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105810
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 59 residues
Representative Sequence IIVLAVISALCIEWSVPKWDRAPVMPVTARLVALISIMLWLGAILVSVEIPALTGLG
Number of Associated Samples 89
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 96.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(12.000 % of family members)
Environment Ontology (ENVO) Unclassified
(35.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 49.41%    β-sheet: 0.00%    Coil/Unstructured: 50.59%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13620CarboxypepD_reg 9.00
PF02276CytoC_RC 5.00
PF01757Acyl_transf_3 2.00
PF05649Peptidase_M13_N 1.00
PF05988DUF899 1.00
PF00196GerE 1.00
PF03449GreA_GreB_N 1.00
PF07879PHB_acc_N 1.00
PF07859Abhydrolase_3 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 1.00
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 1.00
COG3590Predicted metalloendopeptidasePosttranslational modification, protein turnover, chaperones [O] 1.00
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 1.00
COG5394Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHASignal transduction mechanisms [T] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_103093331All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1146Open in IMG/M
3300001139|JGI10220J13317_10754694All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium725Open in IMG/M
3300002908|JGI25382J43887_10465804All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300004114|Ga0062593_102166403All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300004153|Ga0063455_101031265All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300004156|Ga0062589_101919021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300004463|Ga0063356_103105029All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas715Open in IMG/M
3300004479|Ga0062595_100570479All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300005093|Ga0062594_101859139All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 146637Open in IMG/M
3300005336|Ga0070680_100893039All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300005343|Ga0070687_101542820All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300005364|Ga0070673_102305390All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300005438|Ga0070701_11387909All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 146505Open in IMG/M
3300005440|Ga0070705_101951380All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005467|Ga0070706_101681998All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005468|Ga0070707_100991127All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium806Open in IMG/M
3300005471|Ga0070698_102179501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300005526|Ga0073909_10012377All Organisms → cellular organisms → Bacteria2628Open in IMG/M
3300005543|Ga0070672_100297740All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1367Open in IMG/M
3300005548|Ga0070665_100432530All Organisms → cellular organisms → Bacteria → Proteobacteria1325Open in IMG/M
3300005549|Ga0070704_100946289All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300005578|Ga0068854_100690625All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300005617|Ga0068859_102886885All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300005841|Ga0068863_101173686All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300005841|Ga0068863_101211015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium761Open in IMG/M
3300005842|Ga0068858_100160680All Organisms → cellular organisms → Bacteria2115Open in IMG/M
3300005842|Ga0068858_100343418All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300005843|Ga0068860_100886936All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria908Open in IMG/M
3300005937|Ga0081455_10862440All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300006028|Ga0070717_11201995All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300006050|Ga0075028_100775179All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300006050|Ga0075028_100910537All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300006172|Ga0075018_10363659All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300006237|Ga0097621_102318476All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300006806|Ga0079220_10848670All Organisms → cellular organisms → Bacteria → Acidobacteria699Open in IMG/M
3300006852|Ga0075433_11513444All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300006871|Ga0075434_102366519All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300009011|Ga0105251_10469687All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300009012|Ga0066710_103206740All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium628Open in IMG/M
3300009038|Ga0099829_11680984All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300009101|Ga0105247_11827818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300009143|Ga0099792_10954565All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300009162|Ga0075423_12114924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300009162|Ga0075423_12777380All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300009177|Ga0105248_11550058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300010046|Ga0126384_10857470All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium817Open in IMG/M
3300010047|Ga0126382_12431638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300010333|Ga0134080_10696209All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300010358|Ga0126370_10955876All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium778Open in IMG/M
3300010359|Ga0126376_11239936All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium763Open in IMG/M
3300010360|Ga0126372_11404013All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300010360|Ga0126372_12610571All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300010362|Ga0126377_11834103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium682Open in IMG/M
3300010362|Ga0126377_12895995All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300010373|Ga0134128_12517742All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300010398|Ga0126383_10558099All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1211Open in IMG/M
3300010400|Ga0134122_10492110All Organisms → cellular organisms → Bacteria → Acidobacteria1108Open in IMG/M
3300010401|Ga0134121_10218539All Organisms → cellular organisms → Bacteria → Acidobacteria1655Open in IMG/M
3300010403|Ga0134123_11929376All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300012096|Ga0137389_11455442All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300012189|Ga0137388_10762634All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium897Open in IMG/M
3300012207|Ga0137381_10862637All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium784Open in IMG/M
3300012211|Ga0137377_11658302All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300012212|Ga0150985_115255563All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2545Open in IMG/M
3300012285|Ga0137370_10361635All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium874Open in IMG/M
3300012918|Ga0137396_10739004All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium725Open in IMG/M
3300012948|Ga0126375_10453298All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas943Open in IMG/M
3300012948|Ga0126375_11564746All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium566Open in IMG/M
3300012948|Ga0126375_11878688All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300012960|Ga0164301_11349741All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300013308|Ga0157375_13751743All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300014968|Ga0157379_11623467All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300015245|Ga0137409_10948539All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300015374|Ga0132255_102644667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300017966|Ga0187776_11148778All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300020579|Ga0210407_11454601All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300021088|Ga0210404_10739766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300021171|Ga0210405_11227775All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300021407|Ga0210383_11245709All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300021420|Ga0210394_10649929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium926Open in IMG/M
3300025934|Ga0207686_10992104All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium681Open in IMG/M
3300026075|Ga0207708_11972114All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300026088|Ga0207641_10487964All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1195Open in IMG/M
3300026088|Ga0207641_12310193All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300026095|Ga0207676_11652978All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300026326|Ga0209801_1225825All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300027821|Ga0209811_10005082All Organisms → cellular organisms → Bacteria → Proteobacteria4232Open in IMG/M
3300027886|Ga0209486_10851521All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300027903|Ga0209488_11056930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300027908|Ga0209006_11027615All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium654Open in IMG/M
3300028381|Ga0268264_11308454All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium735Open in IMG/M
3300031152|Ga0307501_10030183All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300031152|Ga0307501_10265517All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300031474|Ga0170818_115603789All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300031740|Ga0307468_100618546All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium888Open in IMG/M
3300031740|Ga0307468_101838613All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300031902|Ga0302322_102768823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300031912|Ga0306921_10299840All Organisms → cellular organisms → Bacteria1882Open in IMG/M
3300032174|Ga0307470_10497253All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium889Open in IMG/M
3300032180|Ga0307471_103384666All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil12.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere10.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.00%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.00%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300001139Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10309333133300000559SoilRLKMFIVVLAVMSTVAIEWKFAKWDRAPVMPLTARXXXVISIVLWLGALLISVEVPALTGLG*
JGI10220J13317_1075469413300001139SoilVTPFRLKMLVIVLAVVSALAIERGLPKWDRAPAMPVTARVVALISILLWLSAILVSVEIPALTGLG*
JGI25382J43887_1046580413300002908Grasslands SoilVVSALAIEWSLPKWDRAPAMPVTARVVALISILLWLGAILVSVEIPALTGLG*
Ga0062593_10216640323300004114SoilVVVSGLLLFATQAAGFAAATPFRLKILIVVLAVSSALAVEARVPTWERAPIMPMTARVAALISIVLWLGVILVSVEIPALTGLG*
Ga0063455_10103126523300004153SoilVGLAIGSALAIEWRVAKWDRAPVMPPAARLVALISILLWLGALLASVEIPALTGLG*
Ga0062589_10191902113300004156SoilKMLIIVLAVIAALAVEWSVATCDRARVMPVTAKLLALISIVLWLGALLAAVEISELTGLG
Ga0063356_10310502923300004463Arabidopsis Thaliana RhizosphereVTPFHVKMVIVALALVSAVVIEWSVPEWNRAPAIPMIAKLLAVISITLWLGAILAAVEIAPLTGLG*
Ga0062595_10057047923300004479SoilIVVLAVCSALAVEARVPTWERAPVMPITARVAALISIVLWVGVLLVSLEIPALTGLG*
Ga0062594_10185913923300005093SoilFRAKMFIIVLAVIAALAAEWSVPRRDRARVMPVTAKLLALISIVLWLGALLAAVEISELTGLG*
Ga0070680_10089303913300005336Corn RhizosphereIIVLAVVSALAVEWSVPKWDRAGEIPVTAILLALISIALWLGAILAAVEIPALTGLG*
Ga0070687_10154282023300005343Switchgrass RhizosphereALVIEWSVPEWNRAPVIPVTAKLLALISITLWLGAILAAVEIAPLTGLG*
Ga0070673_10230539013300005364Switchgrass RhizosphereLLFATEAGDFAVVRPFHVKMGLVALAFISALVIEWSVAEWNRAPVIPVTAKLLALISITLWLGAILAAVEIAPLTGLG*
Ga0070701_1138790923300005438Corn, Switchgrass And Miscanthus RhizosphereKMFIIVLAVIAALAAEWSVPRRDRARVMPVTAKLLALISIVLWLGALLAAVEISELTGLG
Ga0070705_10195138013300005440Corn, Switchgrass And Miscanthus RhizosphereATQAAGFAAATPFRLKMLIVVLAVCSALAVEARVPTWERAPVMPITARVAALISIVLWVGVLLVSLEIPALTGLG*
Ga0070706_10168199823300005467Corn, Switchgrass And Miscanthus RhizosphereTEAGDFAAATPFRVKMLIIVLAVISALCIEWSVPKWDRAPVMPVTARLVALISIMLWLGAILVSVEIPALTGLG*
Ga0070707_10099112713300005468Corn, Switchgrass And Miscanthus RhizosphereVTPFRLKMLVIVLAVVSALAIEWSLPKWDRAPAMPVTARVVALISVLLWLGAILVSVEIPALTGLG*
Ga0070698_10217950113300005471Corn, Switchgrass And Miscanthus RhizosphereSALATEWSLPKWDRAPTMPATAKVVALISILLWLGAILVSVEIPALTGLG*
Ga0073909_1001237743300005526Surface SoilDFAAVTPFRLKMLVIVLAVVSALAIEWGLPKWDRAPAMPVTARVVAVISILLWLSAILVSVEIPALTGLG*
Ga0070672_10029774013300005543Miscanthus RhizosphereVVVLAMISALAIERSVATWEPSGVVPMTARLAALVSLILWLGAILVSVEIPALTGLG*
Ga0070665_10043253013300005548Switchgrass RhizospherePKWSRTPVIPVTAKLLALISIALWLGAILAAVEIAPLTGLG*
Ga0070704_10094628923300005549Corn, Switchgrass And Miscanthus RhizospherePFRVKMLIIVLAVISALCIEWSVPKWDRAPVMPVTARLVALISIMLWLGAILVSVEIPALTGLG*
Ga0068854_10069062523300005578Corn RhizosphereIGSAAAVVSGFLLFATEAGDFAEVTPFHVKMVIVALALVSALVIERRVPEWNRAPVIPVTAKLLALISITLWLGAILAAVEIAPLTGLG*
Ga0068859_10288688513300005617Switchgrass RhizosphereALAVEWGLPKWDRAPAMPVTARVVALISILLWLSAILVSVEIPALTGLG*
Ga0068863_10117368613300005841Switchgrass RhizosphereAVTPFRVKMLVVLVAVLSALAIEWRLPQWDRASVMPVTAKVVALISLLLWSGAILVSVEIPALTGLG*
Ga0068863_10121101513300005841Switchgrass RhizosphereISALCIEWSVPKWDRAPVMPVTARLVALISIMLWLGAILVSVEIPALTGLG*
Ga0068858_10016068013300005842Switchgrass RhizosphereLALISALAIEWRVPKWNRAPVIPVTAKLLALISIALWLGAILAAVEIAPLTGLG*
Ga0068858_10034341813300005842Switchgrass RhizosphereLPQWDRASVMPVTAKVVALISLLLWSGAILVSVEIPALTGLG*
Ga0068860_10088693613300005843Switchgrass RhizosphereLLFATEAADYAAVTPFHVKMLIVALALISALAIEWRVPKWNRAPVIPVTAKFLALISIALWLGAVLAAVEIGPLTGLG*
Ga0081455_1086244013300005937Tabebuia Heterophylla RhizosphereLKMFVIALAVASEAAVERGLPAWDRAPAMPLTAKSLALISLLLWAGVILVSVEIPALTGLG*
Ga0070717_1120199523300006028Corn, Switchgrass And Miscanthus RhizosphereLFAVDAGDFAAAPPFQLKMLVVVVAVISALAIEWNLSEWDRAPVMPATARLLALISSVCWLAAILVSVEIPALTGLG*
Ga0075028_10077517923300006050WatershedsALAIEWSLPKWDRAPAMPVTASVVALISILLWLGAILVSVEIPALTGLG*
Ga0075028_10091053723300006050WatershedsVTPFHVKMLIVALAFISALAIEWSVPKWSRTPVIPVSAKLLALISIALWLGAMLAAVEIAPLTGLG*
Ga0075018_1036365923300006172WatershedsFRLKMLVIVLAVVSALAIEWRLPTWDRAPAMPVTARVVALISILLWLGAILVSVEIPALTGLG*
Ga0097621_10231847623300006237Miscanthus RhizosphereFRLKMLVIVLAVLSALAIEWRLPKWDRAPAMPVTGRVVALISILLWLGAILVSVEVPALTGLG*
Ga0079220_1084867023300006806Agricultural SoilLVVVLAVLSALCIERMVPKWDRAPVMPLPARLAALVSIVLWLGAILVSVEVPALTGLG*
Ga0075433_1151344413300006852Populus RhizosphereVKMLIIGLAVISALAIEWSVSKWDRAPVIPVTARLVALISIVLWLGAMLVSVEIPALTGLG*
Ga0075434_10236651923300006871Populus RhizosphereFRVKMLIIGLAVISALAIEWSVSKWDRAPVIPVTARLVALISIVLWLGAMLVSVEIPALTGLG*
Ga0105251_1046968713300009011Switchgrass RhizosphereIESSVPKWNRAPAIPVTAKLLALISIALWLGAILAAVEIPALTGLG*
Ga0066710_10320674013300009012Grasslands SoilISAVAMEWRVPKWDRASVIPVTAKLLALTSIALWLGAILAAVEIAPLTGLG
Ga0099829_1168098423300009038Vadose Zone SoilLITVLAVISALAIEWSVPKWDRAPIMPVTARLVALISIVLWLGALLVSVEVPALIGLG*
Ga0105247_1182781813300009101Switchgrass RhizosphereLPKWDRAPVMPVTARLLALVSILLWLGVILVSVEIPALTGLG*
Ga0099792_1095456523300009143Vadose Zone SoilVTPFRLKMLVIVLAVVSALAIEWSLPTWDRAPAMPVTARVVAMISILLWLGAILVSVEIPALTGLG*
Ga0075423_1211492413300009162Populus RhizosphereGFLLFATEAGSYAAVTPFRVKMLIIGLAVISALAVEWRVPTWDRAPVIPVTARLAALISIVLWLGAMLVSVEIPALTGLG*
Ga0075423_1277738013300009162Populus RhizosphereMLIIGLAVISALAIEWSVSKWDRAPVIPVTARLVALISIVLWLGAMLVSVEIPALTGLG*
Ga0105248_1155005823300009177Switchgrass RhizosphereYAAVTPFHVKMLIVALALISALAIEWRVPKWNRAPVIPVTAKFLALISIALWLGAVLAAVEIGPLTGLG*
Ga0126384_1085747013300010046Tropical Forest SoilAVGFAAATLFRLKMLVVALAVISALAIQWHLPKWDRAPVMPVTARLLALISIVLWLGAMLVSVEIPALTGLG*
Ga0126382_1243163823300010047Tropical Forest SoilTLLAAVSALAIEWRVPMWDRASTMPVTARLVALISIVLWLGTIRVSVEIPALTGLG*
Ga0134080_1069620923300010333Grasslands SoilFAAVTPFRLKMLAIVLAVVSALAIEWSLPTWDRAPAMPVTARVVAMISILLWLGAILVSVEIPALTGLG*
Ga0126370_1095587623300010358Tropical Forest SoilTPFRIKMLVTVLAAASALAIDWRVPTWDRASTMPVSARLVALISIVLWLGTILVSVEIPALTGLG*
Ga0126376_1123993623300010359Tropical Forest SoilLVAVLAAASALAIDWRVPTWDRASTMPVTARLVALISIVLWLGTILVSVEIPALTGLG*
Ga0126372_1140401323300010360Tropical Forest SoilFAVEAGDYAAATPFRIKMLVTVLAAASALAIDWRVQTWDRASTMPVTARLIALISIVLWLGTILVSVEIPALTGLG*
Ga0126372_1261057123300010360Tropical Forest SoilLAIDWRLPTWDRASTMPMTARLVALISILLWLGTILVSVEIPALTGLG*
Ga0126377_1183410323300010362Tropical Forest SoilWDRASTMPVTARLVALISIVLWLGTILVSVEIPALTGLG*
Ga0126377_1289599513300010362Tropical Forest SoilFAAAPPFRFKMLVVALALASALAIEWSLPAWDRAPVMPVTARLLALISIVLWLGAILVSVEIPALTGLG*
Ga0134128_1251774213300010373Terrestrial SoilLCIERMVPKWDRAPVMPLPARLAALVSIVLWLGAILVSVEVPALTGLG*
Ga0126383_1055809913300010398Tropical Forest SoilLFRLKVLVIVLAVVSALVVQWSLPSWDRAPVMPVAARLVAVISLVLWLGALLVSVEVPALTGLG*
Ga0134122_1049211013300010400Terrestrial SoilERAPVMPITARVAALISIVLWVGVLLVSLEIPALTGLG*
Ga0134121_1021853913300010401Terrestrial SoilLAVEARVPTWERAPVMPITARVAALISIVLWVGVLLVSLEIPALTGLG*
Ga0134123_1192937623300010403Terrestrial SoilTPFHVKMVIVALALISALVIEWSVPEWNRAPVIPVTAKLLALISITLWLGAILAAVEIAPLTGLG*
Ga0137389_1145544223300012096Vadose Zone SoilEAGDFAAVTPFRLKMLVIVLAVVSALAIEWSLPKWDRAPAMPLTARVVALISILLWLGAILVSVEVPALTGLG*
Ga0137388_1076263413300012189Vadose Zone SoilSLPKWDRAPAMPVSARVVALISILLWLGAILVSVEVPALTGLG*
Ga0137381_1086263723300012207Vadose Zone SoilFRLKMLVIVLAVVSALAIEWSLPTWDRAPAMPLTARGVAMISILLWLGAILVSVEIPALTGLG*
Ga0137377_1165830223300012211Vadose Zone SoilDRAPAMPVTARVVAMISILLWLGAILVSVEVPALTGLG*
Ga0150985_11525556313300012212Avena Fatua RhizosphereSVPKWDQAPVIPATARLLAVISIVLWLGAILVAVEIPALTGLG*
Ga0137370_1036163533300012285Vadose Zone SoilLVIVLAVVSALAIAWSLPKWDRAPAMPVTARVVALISILLWLGAILVSVEVPALTGLG*
Ga0137396_1073900413300012918Vadose Zone SoilSTWDRAPAMPVTARAVALISILLWVGAILVSVEIPALTGLG*
Ga0126375_1045329833300012948Tropical Forest SoilRLKVLVIVLAVVSALVVQWSLPSWDRAPVMPVAARLVAVISLVLWLGALLVSVEVPALTGLG*
Ga0126375_1156474613300012948Tropical Forest SoilVKMVIIVLAIISALAIEWSVPKWDRASVMPLRARLAALISIVLWLGAILVSVEIPALTGLG*
Ga0126375_1187868823300012948Tropical Forest SoilRVKMIVVVLAVISALAIERSVATWEPSGVVPMTARLAALVSLILWLGAILVSVEIPALTGLG*
Ga0164301_1134974113300012960SoilKWDRAPAMPVTAKVVALISILLWLGAMLVSVEVPALTGLG*
Ga0157375_1375174323300013308Miscanthus RhizosphereATEWSLPKWDRAPAMPVTAKVVALISILLWLGAMLVSVEVPALTGLG*
Ga0157379_1162346723300014968Switchgrass RhizosphereVLVMAVLSAVVMEWRVPEWDRAPVMPVTARFLALISIALWLGAILAAVEIAPLTGLG*
Ga0137409_1094853923300015245Vadose Zone SoilGDFAAVTPFRVKMLVIVLAVISALAVEWRVPKWDRAPVIPVTAKLLALISIVLWLGAILAAVEIAPLTGLG*
Ga0132255_10264466723300015374Arabidopsis RhizosphereTPFRLKMLVIVLAVVSALASEWSVPKWDRAPAMPVTAKVVALISILLWLGAILVSVEVPALTGLG*
Ga0187776_1114877813300017966Tropical PeatlandLPQWDRAPAMPVMARLVALASIVLWLGAILVSVEIPAVTGLG
Ga0210407_1145460113300020579SoilILLAVVSALAVQWNVPKWDRAPVIPTTAKLLALVSIMLWLGAILAGTEIAALTGLG
Ga0210404_1073976623300021088SoilVVSGFVLFATEAGDFAAAAPFRIKMLIIVLAVISALATEWSALKWERAPVIPGMAKLLALISIVLWLSAILASVEVPALTGLG
Ga0210405_1122777523300021171SoilTEAGDYAAVTPFRVKMVIIVLAVMSALAKEWRLPNWDRAPVMPVTAKLLALVSIVLWLGAILAGVEVAPLTGLG
Ga0210383_1124570913300021407SoilISALAKEWRVPLWDRAPVMPVTARLLALVSMVLWLGAILAGVEVAPLTGLG
Ga0210394_1064992913300021420SoilLVIVLAVVSALAIEWSLPKWEQAPAMPATASVAALISILLWLGAILVSVEIPALTGLG
Ga0207686_1099210413300025934Miscanthus RhizosphereTPFRLKMLVIVLAVLSALAIEWRLPKWDRAPAMPVTGRVVALISILLWLGAILVSVEIPALTGLG
Ga0207708_1197211413300026075Corn, Switchgrass And Miscanthus RhizosphereKMVIVALALISALVIDRRVPVWNRAPVIPATARLLALISITLWLGALLAAVEIAPLTGLG
Ga0207641_1048796433300026088Switchgrass RhizosphereFAAVTPFRVKMLVVLVAVLSALAIEWRLPQWDRASVMPVTAKVVALISLLLWSGAILVSVEIPALTGLG
Ga0207641_1231019323300026088Switchgrass RhizosphereIIVLAVISALCIEWSVPKWDRAPVMPVTARLVALISIMLWLGAILVSVEIPALTGLG
Ga0207676_1165297823300026095Switchgrass RhizosphereIVAMALISTLVIEWSVPEWNRAPVIPVTAKLLALISITLWLGAILAAVEIAPLTGLG
Ga0209801_122582523300026326SoilRAPVMPVTARLVALVSILLWLGAILASVEVPALTGLG
Ga0209811_1000508213300027821Surface SoilFLFAVEAGDFAAVTPFRLKMLVIVLAVVSALAIEWGLPKWDRAPAMPVTARVVAVISILLWLSAILVSVEIPALTGLG
Ga0209486_1085152123300027886Agricultural SoilAALAVEWSVARWDRAPVVPVTATLLALLSIVLWLGAILAAVEIPALTGIG
Ga0209488_1105693013300027903Vadose Zone SoilNLEKWDRAPVMPVTARLVALMSIVFWLGVILVSVEIPALTGLG
Ga0209006_1102761523300027908Forest SoilMSALAKERSVPNWDRAPVIPVTAKLLALVSMVLWLGAILAGVAIAPLTGLG
Ga0268264_1130845423300028381Switchgrass RhizosphereRSVPVTAKVVALISLLLWSGAILVSVEIPALTGLG
Ga0307501_1003018313300031152SoilFRVKMLTIVLAVIAALAVEWSVPKWDRARVMPVTAKLLALISMVLWLGALLAAVEISELTGLG
Ga0307501_1026551723300031152SoilPNWDRAPVIPVTARLLALISIVLWLGAILAAVEIAPLTGVG
Ga0170818_11560378923300031474Forest SoilALAIEWSLPKWDRAPAMPLTARVVALVSILLWLSAILVSVEIPALTGLG
Ga0307468_10061854613300031740Hardwood Forest SoilAGDYAAATAFRAKVLVIVLAVVSAFVVERSLPGWEQAPVMPVAARLLAVVSLVLWLGAILVSVEIPALTGLG
Ga0307468_10183861323300031740Hardwood Forest SoilRLPKWERAPAMPVTARVVALISILLWLGGILASVEVPALTGLG
Ga0302322_10276882323300031902FenLVVVLALVSALAIEWSLPMWNRAPVMPVTARLVAVMSIVLWLGALLVSVEIPALTGLG
Ga0306921_1029984043300031912SoilVISGFLLFAVEAGDYAAATPFRIKMLVTVLAAASALAVDWRVPMWDRAPTMPVTARLVALISIVLWLGTILVSVEIPALTGLG
Ga0307470_1049725313300032174Hardwood Forest SoilFRVKMLIAVLAIMSALAIEWNVPRWDRAHAMPVTARLVALISILLWLGAMLVSVEIPALTGLG
Ga0307471_10338466613300032180Hardwood Forest SoilAIERSVATWEASGVVPMTARLAALESLILWLGAILVSVEIPALTGLG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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