NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105899

Metagenome / Metatranscriptome Family F105899

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105899
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 54 residues
Representative Sequence KWGWYQSIYGLANGDITRFEDITKLNVHQCFTMLSFMKEKAEIEAQQIKSKF
Number of Associated Samples 88
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 4.00 %
% of genes from short scaffolds (< 2000 bps) 3.00 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(21.000 % of family members)
Environment Ontology (ENVO) Unclassified
(59.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 56.25%    β-sheet: 0.00%    Coil/Unstructured: 43.75%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF14550Peptidase_S78_2 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.00 %
All OrganismsrootAll Organisms1.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300009130|Ga0118729_1013805All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Inhavirus → Nonlabens virus P12024L5993Open in IMG/M
3300009426|Ga0115547_1148454Not Available751Open in IMG/M
3300017706|Ga0181377_1075406Not Available608Open in IMG/M
3300022201|Ga0224503_10054230Not Available1217Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous21.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater20.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine9.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine7.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.00%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water4.00%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean3.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.00%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment2.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.00%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine2.00%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat1.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.00%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.00%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water1.00%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.00%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment1.00%
MarineEnvironmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine1.00%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000128Marine microbial communities from chronically polluted sediments in Adventfjord, Norway : sample - Svalbard Archipelago station 1 sample NOR 08_45mEnvironmentalOpen in IMG/M
3300000131Marine microbial communities from chronically polluted sediments in Tierra del Fuego - site MC sample ARG 02_11.3mEnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300001344Pelagic Microbial community sample from North Sea - COGITO 998_met_02EnvironmentalOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300004642Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI047_10m_RNA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007231Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300009002Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573EnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009130Combined Assembly of Gp0139511, Gp0139512EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009544Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M MetagenomeEnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022201Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21EnvironmentalOpen in IMG/M
3300022822Saline water microbial communities from Ace Lake, Antarctica - #293EnvironmentalOpen in IMG/M
3300022833Saline water microbial communities from Ace Lake, Antarctica - #292EnvironmentalOpen in IMG/M
3300022839Saline water microbial communities from Ace Lake, Antarctica - #337EnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300023566Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 18R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023685Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023698Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 27R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023699Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 81R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024192Seawater microbial communities from Monterey Bay, California, United States - 47DEnvironmentalOpen in IMG/M
3300024236Seawater microbial communities from Monterey Bay, California, United States - 67DEnvironmentalOpen in IMG/M
3300024266Seawater microbial communities from Monterey Bay, California, United States - 75DEnvironmentalOpen in IMG/M
3300024319Seawater microbial communities from Monterey Bay, California, United States - 85DEnvironmentalOpen in IMG/M
3300024326Seawater microbial communities from Monterey Bay, California, United States - 64DEnvironmentalOpen in IMG/M
3300024328Seawater microbial communities from Monterey Bay, California, United States - 44DEnvironmentalOpen in IMG/M
3300024329Seawater microbial communities from Monterey Bay, California, United States - 39DEnvironmentalOpen in IMG/M
3300024415Seawater microbial communities from Monterey Bay, California, United States - 76DEnvironmentalOpen in IMG/M
3300024508Seawater microbial communities from Monterey Bay, California, United States - 77DEnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025266Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025570Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025705Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025887Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026427Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 1R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026434Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 53R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026471Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 77R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027771Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027852Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 7 (SPAdes)EnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300028135Seawater microbial communities from Monterey Bay, California, United States - 7DEnvironmentalOpen in IMG/M
3300028396Seawater microbial communities from Monterey Bay, California, United States - 55DEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031601Marine microbial communities from Ellis Fjord, Antarctic Ocean - #133EnvironmentalOpen in IMG/M
3300031602Marine microbial communities from Ellis Fjord, Antarctic Ocean - #260EnvironmentalOpen in IMG/M
3300031608Marine microbial communities from water near the shore, Antarctic Ocean - #1EnvironmentalOpen in IMG/M
3300031645Marine microbial communities from Ellis Fjord, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300032274Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1026276523300000101MarineDGGYSKSANFGAKWGWYQSIYGLSNGDITRFEDITKLNVHQCFTMLSFMKEKSEIEAQQIKSKF*
SA_S1_NOR08_45mDRAFT_1021739613300000128MarineKKWGWYQSIYGLADGDITRFEDITKLNVHQCFTMLSFMKEKSEIEAQQIKNKF*
TDF_MC_ARG02_113mDRAFT_101518513300000131MarineNFGAKWGWYSSIYGLAGGDVRKFEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF*
BBAY92_1012261833300000947Macroalgal SurfaceKWGWYQSIYGLANGDITRFEDITKLNVHQCFTMLSFMKEKAEIEAQQIKSKF*
JGI20152J14361_1007791913300001344Pelagic MarineNKRYGWYTSIYGLANGDITKFEDITKLNVHQCFTMLSFMKEKSEMEAQQIKNKF*
JGI20154J14316_1014324623300001348Pelagic MarineQSIYALAQSDITRFEDITKLNIHQCFKMLSFEKEKNELEAQQIKNKF*
JGI26084J50262_101759943300003427MarineQTGNGDLSAASNFSRKWGWYQSIYGLSNGDITRFEDITKLNVNQCFTMLSFMKEKAQLEAQQIKNKF*
Ga0055584_10076346333300004097Pelagic MarineELAQGDITRFENITKLNIHECLTMLSFLKEKQQAEMQQIKNKK*
Ga0066223_114935813300004461MarineSVYELAQGDITRFEDITKLNIHECLTMLSFIKEKQDAESQQIKNKK*
Ga0066612_129974013300004642MarineNFGAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF*
Ga0075441_1015729833300006164MarineSSGSDEHTRAANFGKKYGWYQSIFSLAGGNVRKFEDITKLNFHQCFTFLSFTKEKAEIEAQQIKSKF*
Ga0098055_123965713300006793MarineKWGWYQSIYGLSNGDITKFEDITKLNIHQCFTMLSFTKEKAEIEAQQIKSKF*
Ga0075467_1018213433300006803AqueousWGWYQSIYGLANGDITRFEDITKLNVHQCFTMLSFMKEKSEIEAQQIKNKF*
Ga0070748_106840443300006920AqueousSRAANFNKRYGWYSSIFALAQSDITRFEDITKLNVHQCFTMLSFMKEKSEIEAQQIKNKF
Ga0070748_118239533300006920AqueousAAKWGWYQSIYALAQSDITRFEDITKLNIHQCFTMLSFEKEKNELEAQQIKNKF*
Ga0075469_1007730513300007231AqueousWYQSIYGLANGDITRFEDITKLNVNQCFTMLSFMKEKAELEAQQIKSKF*
Ga0099851_119049833300007538AqueousWYQSVYALADGDITKFEDITKLNINQCFTMLTFLKEKTELESSNIKNKF*
Ga0099847_123961823300007540AqueousLANGDITRFEDITKLNVHQCFTMLSFMKEKTEMEAQQIKNKF*
Ga0099846_117775613300007542AqueousKWGWYQSVYALADGDITKFEDITKLNINQCFTMLTFLKEKTELESSNIKNKF*
Ga0105745_128768913300007972Estuary WaterSIYGLSNGDITKFENITKLNIHQCFTMLSFTKEKAEIEAQQIKSKF*
Ga0102810_110523013300009002EstuarineSIYGLSNGDITKFEDITKLNIHQCFTMLSFMKEKAELEAKQIKSKF*
Ga0102811_118941733300009024EstuarineSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF*
Ga0115549_115096633300009074Pelagic MarineYGLAGGDVRKFEDITKLNIHQCFTFLSFTKEKAELESQQIKSKF*
Ga0115549_115244533300009074Pelagic MarineRAANFNKRYGWYTSIYGLANGDITKFEDITKLNVHQCFTMLSFMKEKSEMEAQQIKNKF*
Ga0118729_101380513300009130MarineFATSGGGLFTKEAQFNKKWGWYNSLYGLAQGDITRFKDITKLNIHQCFRMLSFEKEKSELDAQNIKSKF*
Ga0115547_114845413300009426Pelagic MarineSVYGLANGDITKFENITKLKMHECLLMLTFMKEKNEVEIQQIKSKQRK*
Ga0114915_104654743300009428Deep OceanYSRSANFASKWGWYQSIYGIANGDITKFEDITKLNIHQCFTMLSFMKEKAEIESQNIKNKF*
Ga0115005_1034749013300009432MarineAGYSRAANFGAKWGWYQSIYGLSNGDITKFEDITQLNVHQCFTMLSFMKEKAEIEAQQIKSKF*
Ga0115560_131044313300009447Pelagic MarineRDGDYSRAANFGKKWGWYSSIYSLAGGDVTKFEDITKLNFHECFTFLSFTKEKAEIEAQQIKSKF*
Ga0115560_131044413300009447Pelagic MarineRDGDYSRAANFGKKWGWYSSIYSLAGGDVTKFEDITKLNFHQCFTFLSFTKEKTEIEAQQIKSKF*
Ga0115565_1044738213300009467Pelagic MarineSIYGLANGDITKFEDITKLNVHQCFTMLSFMKEKSEMEAQQIKNKF*
Ga0115006_1134103823300009544MarineWGWYSSIYGLAGGDVTRLQDITKLNVHECFTMLSFTKEKAEIEAQQIKSKF*
Ga0118733_10075809743300010430Marine SedimentYGLANGDITRFEDITKLNIHQCFTMLSFMKEKAELEAKQIKSKF*
Ga0118733_10747926423300010430Marine SedimentGLAGGDITRFEDITKLEMHKCFTMLSFLKEKNEIEAKQIKNKFK*
Ga0181377_107540633300017706MarineYTLANGDITRLEDITKLEVHKCFMMLSFVKEKNEIESQQIKSKFKR
Ga0181383_103939543300017720SeawaterFCQKWGWYQSIYALANGDITRFEDITKLNIHQCFTMLSFTKEKAEIEAQQIKSKF
Ga0181402_104453833300017743SeawaterGQKWGWYQSVYTLAQGNVTRFEDITKLNIHKALLALTFIKEKSELESKQIKNKFK
Ga0181380_132199623300017782SeawaterWYQSIYALANGDITRFEDITKLNIHQCFTMLSFTKEKAEIEAQQIKSKF
Ga0206129_1016104413300020182SeawaterWGWYQSIYGLANGDITRFEDITKLNIHQCFTMLSFMKEKAELEAKQIKSKF
Ga0213865_1047843423300021373SeawaterTGDGGYSSAANFSRKWGWYQSIYGLANGDITRFEDIIKLNIHQCFTMLSFMKEKAELEAQQIKSKF
Ga0212023_103298333300022061AqueousWYQSIYSLAGGDVERFENITKLNIHQCFTMLSFTKEKAELEAQRIKNKF
Ga0212029_100396843300022063AqueousTVYALADGDITKFEDITKLNINQCFTMLTFLKEKTELESSNIKNKF
Ga0196889_105788013300022072AqueousWGWYQSIYSLAGGDVARFENITKLNIHQCFTMLSFTKEKAELEAQRIKNKF
Ga0212022_106875723300022164AqueousRWYQSIYGLANGDITRFEDITKLNVHQCFTMLSFMKEKAEIEAQQIKNKF
Ga0196903_100975613300022169AqueousGWYQSVYALADGDITKFEDITKLNINQCFTMLTFLKEKTELESSNIKNKF
Ga0196887_104051833300022178AqueousRGANFASKWGWYQSIYALAQSDITRFEDITKLNIHQCFTMLSFEKEKNELEAQQIKNKF
Ga0196887_108270533300022178AqueousYSLAGGDVERFENITKLNIHQCFTMLSFTKEKAELEAQRIKNKF
Ga0224503_1005423013300022201SedimentSGGDGGLSRTANFNKRYGWYQSIYGLANGDITKFEDITKLNIHQCFTMLSFMKEKAELEAKQIKSKF
Ga0222646_10266413300022822Saline WaterGYSRTANFGQKWGWYQSIYGLANGDVQRFEDITKLNIHQCLTMLSFKKELAEVESQNIKNKF
Ga0222645_10111813300022833Saline WaterYSRTANFGQKWGWYQSIYGLANGDVQRFEDITKLNIHQCLTMLSFKKELAEVESQNIKNK
Ga0222645_10477013300022833Saline WaterTANFGQKWGWYQSIYGLANGDVQRFEDITKLNIHQCLTMLSFKKELAEVESQNIKNKF
Ga0222649_103070323300022839Saline WaterSIYGLANGDVQRFEDITKLNIHQCLTMLSFKKELAEVESQNIKNKF
(restricted) Ga0233411_1002592813300023112SeawaterSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228679_101148133300023566SeawaterWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228686_100312813300023685SeawaterNFSAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228682_103273233300023698SeawaterNFGAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228695_104399213300023699SeawaterIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228637_100733213300024192SeawaterWYQSIYGLANGDITRFEDITKLNIHQCFTMLSFMKEKAELEAKQIKSKF
Ga0228655_100469113300024236SeawaterGWYQSIYGLANGDITRFEDITKLNIHQCFTMLSFMKEKAELEAKQIKSKF
Ga0228661_108792213300024266SeawaterQSIYGLANGDITRFEDITKLNVHRCFTMLSFMKEKAELEAKQIKSKF
Ga0228670_101563013300024319SeawaterRAANFSAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228652_107285513300024326SeawaterWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228635_107962713300024328SeawaterGAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228631_100384713300024329SeawaterDYSRAANFSAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228662_111734023300024415SeawaterRAANFGAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228663_108437613300024508SeawaterWYQSIYGLANGDITKFEDITKLNIHQCFTMLSFMKEKAELEAKQIKSKF
(restricted) Ga0255046_1056863413300024519SeawaterFGAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0209634_106552543300025138MarineTRDGDYSRAANFGKKWGWYSSIYSLAGGDVTKFEDITKLNFHECFTFLSFTKEKAEIEAQQIKSKF
Ga0209634_115576033300025138MarineAANFGKKWGWYSSIYSLAGGDVTKFEDITKLNFHECFTFLSFTKEKAEIEAQQIKSKF
Ga0209634_125064713300025138MarineGKKWGFYSSIYSLAGGDVTKFEDITKLNFHECFTFLSFTKEKTEIEAQQIKSKF
Ga0208032_106934333300025266Deep OceanGDGSYSRADNFGKKWGWYQSIYGLSNGCIERFENITKLNMHQCFTMLSFMKEKAELESQQIKNKF
Ga0208814_100676813300025276Deep OceanYSRSANFASKWGWYQSIYGIANGDITKFEDITKLNIHQCFTMLSFMKEKAEIESQNIKNK
Ga0208660_106646813300025570AqueousWYTSIYGLANGDITKFEDITKLNVHQCFTMLSFMKEKSEMEAQQIKNKF
Ga0208660_109576813300025570AqueousESNFSEKWGWYQSIYSLAGGDVERFENITKLNIHQCFTMLSFTKEKAELEAQRIKNKF
Ga0208643_108831233300025645AqueousNKRYGWYTSIYGLANGDITKFEDITKLNVHQCFTMLSFMKEKSEMEAQQIKNKF
Ga0208134_114101513300025652AqueousESNFSEKWGWYQSIYSLAGGDVARFENITKLNIHQCFTMLSFTKEKSELEAQRIKNKF
Ga0209374_101195613300025705MarineWYQSIYALANGCVERFENITKLNVHQCFTFLSFTKEKAEIEQQQIKNKF
Ga0208545_116999623300025806AqueousFSEKWGWYQSIYSLAGGDVARFENITKLNIHQCFTMLSFTKEKAELEAQRIKNKF
Ga0209603_111361533300025849Pelagic MarineATKWGWYQSIYGLANGDITRFEDITKLNVYQCFTMLSFMKEKTEMEAQQIKNKF
Ga0208645_126718323300025853AqueousKWGWYQSIYGLANGDITRFEDITKLNIHQCFTMLSFMKEKAELEAKQIKSKF
Ga0208544_1022506913300025887AqueousSEKWGWYQSIYSLAGGDVARFENITKLNIHQCFTMLSFTKEKAELEAQRIKNKF
Ga0247556_109826813300026427SeawaterSIYGLANGDITRFEDITKLNVHQCLTMLSFEKEKSELEAKRIKSKF
Ga0247591_107637313300026434SeawaterGWYQSIYGLANGDITRFEDITKLNIHQCFTMLSFMKEKAELESKQIKSKF
Ga0247602_108874133300026471SeawaterWYSSIFSLEGGDVKKHEDINKLNIHQCFNFLSFTKEKAEIEAQQIKSKF
Ga0247602_108937913300026471SeawaterSNKWRWYQSIYGLANGDITKFENITKLNIHQCFTMLSFMKEKAELEAKQIKSKF
Ga0209383_101287013300027672MarineIYGLANGDIAKFEDITKLNIHQCFTMLSFMKEKAELESQNIKNKF
Ga0209383_104240843300027672MarineGYSRSANFASKWGWYQSIYGIANGDITKFEDITKLNIHQCFTMLSFMKEKAEIESQNIKNKF
Ga0209279_1010960913300027771MarineYTRAANFGKKYGWYQSIFSLAGGNVRKFEDITKLNFHQCFTFLSFTKEKAEIEAQQIKSK
Ga0209279_1021074913300027771MarineSKSANFASKWGWYQSIYGLANGDIAKFEDITKLNIHQCFTMLSFMKEKAELESQNIKNKF
Ga0209092_1010661843300027833MarineDLSRSANFNRKWGWYQSIYGLSNGDITKFENITKLNIHQCFTMLSFTKEKAEIEAQQIKSKF
Ga0209345_1079067213300027852MarineGDGDLSRTANFNRKWGWYQSIYGLSNGDITKFENITKLNIHQCFTMLSFTKEKAEIEAQQIKSKF
(restricted) Ga0233414_1002789953300028045SeawaterIFSLAGGDVRRLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228606_109951713300028135SeawaterAANFSAKWGWYSSIFSLAGGDVRKLEDITKLNIHQCFTFLSFTKEKAEIEAQQIKSKF
Ga0228643_114908623300028396SeawaterWYQSIYALANGCVERFEDITKLNVHQCFTFLSFTKEKAEIEQQQIKNKF
Ga0307488_1027722613300031519Sackhole BrineSGKWGWYQSIYGLSAGDITRLEDITKLNVHQCLTMLSFKKEKAELEAQRIKKKF
Ga0307992_134181923300031601MarineDGGYSRTANFGAKWGWYQSIYGLANGRIEQFENITKLNVHQCFTMLSFMKEKAEIEKQQIKNKF
Ga0307993_108476513300031602MarineWGWYQSIYGLANGDIAKFEDITKLNIHQCFTMLSFMKEKAELESQNIKNKF
Ga0307999_105292613300031608MarineSIYGLANGDITRFENITKLNIHQCFTMLSFMKEKAEIESQNIKNKF
Ga0307990_110368743300031645MarineSKSANFSSKWGWYQSIYGLANGDITRFENITKLNIHQCFTMLSFMKEKAELEAQNIKNKF
Ga0316203_122209823300032274Microbial MatIYGLANGDITRFEDITKLNVHQCFTMLSFMKEKSEIEAQQIKNKF

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.