NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105945

Metagenome Family F105945

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105945
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 124 residues
Representative Sequence MMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNE
Number of Associated Samples 90
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 14.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 92.00 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (59.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(21.000 % of family members)
Environment Ontology (ENVO) Unclassified
(26.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.03%    β-sheet: 8.33%    Coil/Unstructured: 57.64%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00398RrnaAD 40.00
PF01121CoaE 4.00
PF135632_5_RNA_ligase2 1.00
PF08335GlnD_UR_UTase 1.00
PF00476DNA_pol_A 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG003016S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)Translation, ribosomal structure and biogenesis [J] 40.00
COG0237Dephospho-CoA kinaseCoenzyme transport and metabolism [H] 4.00
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 1.00
COG2844UTP:GlnB (protein PII) uridylyltransferaseSignal transduction mechanisms [T] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.00 %
UnclassifiedrootN/A41.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101428187Not Available543Open in IMG/M
3300001661|JGI12053J15887_10449891Not Available617Open in IMG/M
3300004633|Ga0066395_10401157All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium773Open in IMG/M
3300005171|Ga0066677_10420097All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300005174|Ga0066680_10465021All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300005174|Ga0066680_10724644All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia607Open in IMG/M
3300005174|Ga0066680_10873252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ScaeMP-e122535Open in IMG/M
3300005178|Ga0066688_10343032All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300005186|Ga0066676_10114493All Organisms → cellular organisms → Bacteria1655Open in IMG/M
3300005355|Ga0070671_100420070All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1145Open in IMG/M
3300005356|Ga0070674_101032959Not Available723Open in IMG/M
3300005445|Ga0070708_100572022All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300005467|Ga0070706_100676732All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300005471|Ga0070698_100323257All Organisms → cellular organisms → Bacteria1473Open in IMG/M
3300005518|Ga0070699_100379190All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300005552|Ga0066701_10800650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia561Open in IMG/M
3300005555|Ga0066692_10413539All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300005559|Ga0066700_10516907All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300005586|Ga0066691_10709706Not Available595Open in IMG/M
3300005841|Ga0068863_100403075All Organisms → cellular organisms → Bacteria → Proteobacteria1338Open in IMG/M
3300006034|Ga0066656_10862448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia580Open in IMG/M
3300006163|Ga0070715_10982216Not Available525Open in IMG/M
3300006797|Ga0066659_11890670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ScaeMP-e122507Open in IMG/M
3300006806|Ga0079220_10370025All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria921Open in IMG/M
3300006844|Ga0075428_101271441All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium774Open in IMG/M
3300006844|Ga0075428_101451035All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium719Open in IMG/M
3300006845|Ga0075421_100385347All Organisms → cellular organisms → Bacteria1686Open in IMG/M
3300006847|Ga0075431_101214156Not Available717Open in IMG/M
3300006880|Ga0075429_100400251All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1202Open in IMG/M
3300006880|Ga0075429_101058976Not Available709Open in IMG/M
3300006881|Ga0068865_101771949Not Available558Open in IMG/M
3300006914|Ga0075436_100443499All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium945Open in IMG/M
3300006969|Ga0075419_10384656All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria959Open in IMG/M
3300007255|Ga0099791_10100748All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1329Open in IMG/M
3300009012|Ga0066710_100360654All Organisms → cellular organisms → Bacteria2152Open in IMG/M
3300009100|Ga0075418_12537273Not Available559Open in IMG/M
3300009147|Ga0114129_11261662All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium917Open in IMG/M
3300009147|Ga0114129_12967313Not Available559Open in IMG/M
3300009792|Ga0126374_10363991All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium997Open in IMG/M
3300010047|Ga0126382_10181017All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1479Open in IMG/M
3300010047|Ga0126382_11136106All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium695Open in IMG/M
3300010303|Ga0134082_10299305Not Available674Open in IMG/M
3300010335|Ga0134063_10141571All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1111Open in IMG/M
3300010336|Ga0134071_10231352All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium917Open in IMG/M
3300010359|Ga0126376_10827393All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium907Open in IMG/M
3300010360|Ga0126372_10532317All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1111Open in IMG/M
3300010361|Ga0126378_11913686Not Available675Open in IMG/M
3300010399|Ga0134127_10811000All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium985Open in IMG/M
3300010401|Ga0134121_12707597Not Available541Open in IMG/M
3300012205|Ga0137362_10422067All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1155Open in IMG/M
3300012205|Ga0137362_11029138Not Available701Open in IMG/M
3300012922|Ga0137394_10335498All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1291Open in IMG/M
3300012929|Ga0137404_11851683Not Available561Open in IMG/M
3300012930|Ga0137407_10718348All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria941Open in IMG/M
3300012930|Ga0137407_11158164All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium733Open in IMG/M
3300012948|Ga0126375_10784003All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium753Open in IMG/M
3300012971|Ga0126369_11433831All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium780Open in IMG/M
3300012972|Ga0134077_10322533Not Available653Open in IMG/M
3300013307|Ga0157372_12577984Not Available584Open in IMG/M
3300014968|Ga0157379_11137710Not Available749Open in IMG/M
3300014969|Ga0157376_12598409Not Available546Open in IMG/M
3300015373|Ga0132257_104171376Not Available526Open in IMG/M
3300016357|Ga0182032_11395369Not Available606Open in IMG/M
3300017939|Ga0187775_10008782All Organisms → cellular organisms → Bacteria2524Open in IMG/M
3300019789|Ga0137408_1133041All Organisms → cellular organisms → Bacteria5764Open in IMG/M
3300022756|Ga0222622_11120379Not Available579Open in IMG/M
3300025899|Ga0207642_10787344Not Available604Open in IMG/M
3300025905|Ga0207685_10736542Not Available539Open in IMG/M
3300025910|Ga0207684_10059496All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3244Open in IMG/M
3300025931|Ga0207644_10389959All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1137Open in IMG/M
3300025937|Ga0207669_11144327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium658Open in IMG/M
3300025938|Ga0207704_11653384Not Available550Open in IMG/M
3300026285|Ga0209438_1193704Not Available540Open in IMG/M
3300026322|Ga0209687_1235430Not Available566Open in IMG/M
3300026324|Ga0209470_1254080All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria703Open in IMG/M
3300026326|Ga0209801_1353256Not Available517Open in IMG/M
3300026328|Ga0209802_1018399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes3903Open in IMG/M
3300026331|Ga0209267_1037423All Organisms → cellular organisms → Bacteria2271Open in IMG/M
3300026332|Ga0209803_1042902All Organisms → cellular organisms → Bacteria2047Open in IMG/M
3300026332|Ga0209803_1344061Not Available516Open in IMG/M
3300026342|Ga0209057_1100727All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1161Open in IMG/M
3300026536|Ga0209058_1233896Not Available669Open in IMG/M
3300027725|Ga0209178_1183975Not Available734Open in IMG/M
3300027909|Ga0209382_10481444All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1370Open in IMG/M
3300028792|Ga0307504_10367633Not Available558Open in IMG/M
3300031538|Ga0310888_10762269Not Available597Open in IMG/M
3300031681|Ga0318572_10813683Not Available555Open in IMG/M
3300031716|Ga0310813_12050024Not Available540Open in IMG/M
3300031724|Ga0318500_10237230All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium881Open in IMG/M
3300031740|Ga0307468_100133348All Organisms → cellular organisms → Bacteria1557Open in IMG/M
3300031820|Ga0307473_11153156Not Available574Open in IMG/M
3300031945|Ga0310913_10733432All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium698Open in IMG/M
3300032000|Ga0310903_10642395Not Available569Open in IMG/M
3300032017|Ga0310899_10547208Not Available574Open in IMG/M
3300032055|Ga0318575_10484278Not Available628Open in IMG/M
3300032068|Ga0318553_10003864All Organisms → cellular organisms → Bacteria6015Open in IMG/M
3300032180|Ga0307471_100792547All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1114Open in IMG/M
3300032180|Ga0307471_103239564Not Available577Open in IMG/M
3300032205|Ga0307472_101763315Not Available614Open in IMG/M
3300032261|Ga0306920_100616820All Organisms → cellular organisms → Bacteria1604Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil21.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10142818723300000364SoilMMVVMQKRSQAVAGLLAASIVGLAVSSXLYVWPGNAPAPRWLPXPXAEALVVPAYPVTVRTVEMRRGDTLAQALARGGLQSRSATLLATQFGKNGADLRRIRAGATIE
JGI12053J15887_1044989113300001661Forest SoilVVFDFFAHVRRAIAMMVVMQARLLAVTGLLVASIAGLAVSTYLYVWPGTAPAPHWLSDQKVEALVVPAFPVTVRSVEMRRGDTLVQALTRGGLPVRAATALATQFGKNGADLRRIRAG
Ga0066395_1040115723300004633Tropical Forest SoilMMDVMQKRSMAATALLAASFLGLAVSVYRYVWPGESLAPRWLAETKAEALSVPAYPITTSGVEMRRGDSLVQALARGGLSSRSATLLTTQFGKNGADL
Ga0066677_1042009713300005171SoilMMGVMRTRSLAATGLLAASFLVLAVSVHQYVWPGTAQAPRWLPEPKVEALVVPPYPVTVHSVEMGRGDTLVRALARAGLPSRSATLLATQFGKNGADLRKIRAGA
Ga0066680_1046502113300005174SoilMMVVMQARLLAVTGFLVASIAGLAVSTYLYVWPGAAPAPHWLADPKMEPLVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMTVRYEASPWLSFAARPLDGGW
Ga0066680_1072464423300005174SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEAS
Ga0066680_1087325213300005174SoilVRKVAWFLIFSPHDLRAIAMMVVMQARLMAVTGFLVASIAGLAVSTYLYVWPGAAPAPHWLADPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEASPWLSFAARPLDGGWRVGRAETVPELRVEVVKGVV
Ga0066688_1034303223300005178SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITSNARNEPIAVRYEASPWLSFAARPLDGGWRVGRAETVPELRVEVVKGVVQRS
Ga0066676_1011449333300005186SoilMMGVMQKRSLVAAGLLAASFLVLGVSVHRYVWPGMAQAPHWLPEPKVEALVVPAYPVTVRSMEMRRGDTLVQALARGGLQQRSATLLATQFGKNGADL
Ga0070671_10042007013300005355Switchgrass RhizosphereMQGRSRAAAGFLAASIVGLAVSSYLYIWPGNAKAPRWLSEPKVEALVVQAYPATIRSVEMRRGDTLAQALARGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRY
Ga0070674_10103295913300005356Miscanthus RhizosphereMMVVMQKRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPTPKAEALVVPAYPVTVRTVEMRRGDTLAQALARGGLRSRSATLLATQFGKNGADLRRIRAGATIEITWNSRNEVTQVRYEASPWLSFAARPANGHWRVGRAETVPELRVEAVSGVVQR
Ga0070708_10057202223300005445Corn, Switchgrass And Miscanthus RhizosphereMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEASPWLSFAARPLDGGWRVGRAETVPELRV
Ga0070706_10067673213300005467Corn, Switchgrass And Miscanthus RhizosphereMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIR
Ga0070698_10032325713300005471Corn, Switchgrass And Miscanthus RhizosphereMMVVMQARLLAVTGFLVASIAGLAVSTFLYVWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIR
Ga0070699_10037919013300005518Corn, Switchgrass And Miscanthus RhizosphereMMVVMQARLMAVTAFLVASIAGLAVPTYLYVWPGAAPAPHWLADPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPM
Ga0066701_1080065023300005552SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEIT
Ga0066692_1041353913300005555SoilMMVVMQRRSQAVASLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPATLRTVEMRRGDTLAQALARGGLQSRSATLLATQFAKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWL
Ga0066700_1051690723300005559SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPM
Ga0066691_1070970623300005586SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEASPWLSFAARPLDGGW
Ga0068863_10040307523300005841Switchgrass RhizosphereMQGRSRAAAGFLAASIVGLAASSYLYIWPGNAKAPRWLSEPKVEALVVQAYPATIRSVEMRRGDTLAQALARGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLSFAARPMSGSWRV
Ga0066656_1086244813300006034SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNE
Ga0070715_1098221613300006163Corn, Switchgrass And Miscanthus RhizosphereMQGRSRAAAGFLAASIVGLAVSSYLYIWPGNAKAPRWLSEPKVEALVVQAYPATIRSVEMRRGDTLAQALARGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLSFAARPMSGSWRVGRAET
Ga0066659_1189067013300006797SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYE
Ga0079220_1037002513300006806Agricultural SoilMQGRSRAAAGFMAASIVGLVVSSYLYIWPGNAKAPHWLSEPKLEPLVVPAYPMTIRSVEMRRGDTLAQALSRGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNQATQVRYEASPWLSFAARPWNGSWRVGRAETVPDLRVEAVSGVVQR
Ga0075428_10127144113300006844Populus RhizosphereMQARLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKMEPLVVPAYPVTVREVEMRRGDTLAQALTRAGLASRAATALATQFGKNGADLRRIRAGATIEITWNARQWPLQVRYEASP
Ga0075428_10145103513300006844Populus RhizosphereMQPRLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKMEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAATALATQFGKNGADLRRIRAGATIE
Ga0075421_10038534713300006845Populus RhizosphereMQARLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKTEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAASALATQFGKNGADLRRIRAGATIEIT
Ga0075431_10121415613300006847Populus RhizosphereMQARLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKTEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAASALATQFGKNGADLRRIRAGATIEITWNARDWPIQVRYEASPWLSFAARPIPGGGWRVGRAETVPELRVEVVKGVVQR
Ga0075429_10040025113300006880Populus RhizosphereMQPRLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKMEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAATALATQFGKNGADLRRIRAGATIEITWNARQWPLQVRYEASP
Ga0075429_10105897613300006880Populus RhizosphereMQARLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKTEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAASALATQFGKNGADLRRIRAG
Ga0068865_10177194913300006881Miscanthus RhizosphereMMVVVQKRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPTPKAEALVVPAYPVTVRTVEMRRGDTLAQALARGGLRSRSATLLATQFGKNGADLRRIRAGATIEITWNSRNEVAQVRYEASPWLSFAARPANGHWRVGR
Ga0075436_10044349913300006914Populus RhizosphereMQGRSRAAAGFLAASIVGLAVSSYLYIWPGNANAPRWLSEPKVEPLVVQAYPATIRSVEMRRGDTLAQALARGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEASPW
Ga0075419_1038465623300006969Populus RhizosphereMQARLLAVTGFLVASIAGLAVSSYVYVWPGAAPAPKWLADPKMQPLVVPAYPLTVREVEMRRGDTLAQALTRAGLASRAATALATQFGKNGADLRRIRAGATIEITWNAR
Ga0099791_1010074823300007255Vadose Zone SoilMPKRSLAPTALLTASFLVLAVSVYQYVWPGWAPAPRWLPEPNAESLSLPTCPITVRSVEMRRGDSLAQALARGGLPSRSALLLATQFGKNGADLRRIRTGATIEITW
Ga0066710_10036065443300009012Grasslands SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITW
Ga0075418_1253727323300009100Populus RhizosphereMQARLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKMEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAATALATQFGKNGADLR
Ga0114129_1126166213300009147Populus RhizosphereMMVVMQARLLAVTGFLVASIAGLAVSTYLYVWPGAAPAPHWLADPKMDALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNE
Ga0114129_1296731313300009147Populus RhizosphereMQARLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKTEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAASALATQFGKNGADLRRIRAGATIEITWNARDWPIQVRYEA
Ga0126374_1036399113300009792Tropical Forest SoilLLISSGDVGATAFMMDVMQKRSMAATALLAASVLGLAVSVYRYVWPGEALAPHWLPEAKVEALSVEAFPITTSSVEMRRGDSLVQALARGGLSS
Ga0126382_1018101733300010047Tropical Forest SoilLLISSGDVGATAFMMDVMQKRSMAATALLAASVLGLAVSVYRYVWPGEALAPHWLPEAKVEALSVEAFPITTSSVEMRRGDSLVQALARGGLSSRSATLLAIQFGKNGADLRKIRAGATI
Ga0126382_1113610613300010047Tropical Forest SoilLWLLIFSVHVGAAVVMMGVVVKRSLASGFLVASVLVLAVSVYRYVWPGAAEAPHWLPEPKVEALVVPAYPSTVSTVEMRRGDSLVHALTRGGLPSRSATLLATQFGKNGAD
Ga0134082_1029930523300010303Grasslands SoilMMGVMRTRSLAATGLLAASFLVLAVSVYQYVWPGTAQAPRWLPEPKVEALVVPPYPVTVHSVEMGRGDTLVRALARAGLPSRSATLLTKQFGKKGATLLEIREETTIEITWNARNEATEVRYEASPWLTYAAR
Ga0134063_1014157123300010335Grasslands SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGAD
Ga0134071_1023135223300010336Grasslands SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMTVRYEASPWLSFAARPLDGGWRVGRAET
Ga0126376_1082739313300010359Tropical Forest SoilMQGRSRVAAGFLAASIVGLAVSSFLYVWPGNANAPRWLPEPKVEALVVQAYPATVRSVEMRRGDTLAQALARGGLQSRSASQLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLSFAARPMGGSWRVGRAETVPDLRVEAVSGVVQRSL
Ga0126372_1053231723300010360Tropical Forest SoilMMGVMEKRSLAAAGFLTVSLLVLAVSVHRHVWPGAAEAPHWLPEPKLEALVVPAYPSTVRKVEMRRGDSLVQALARGGLPSRSATLLATQFAKNGADLRRIRAGATIEITWNVRSEPMEVRYEASPWLTFAARPAQGGWRVGRAETIPDL
Ga0126378_1191368613300010361Tropical Forest SoilMMGVMQKRSLAAAGFLAASVLGLAVSVYRYVWPGAAEAPHWLAEPKVEALVVPAYPPAVKKVEMRRGDSIVQALTRGGLPPRSATLLATQFGKNGADLRRIRAGATIEITWNARSE
Ga0134127_1081100013300010399Terrestrial SoilMVVMQRRSQAVAGFLAASIIGLAVSSYLYVWPGNAPAPRWLPAPKAEGLVVPAYPATIRSVEMRRGDTLAQALARGGLQSRSATLLATQFGKNGADLRRIRAGATIEITWNSRNEATQ
Ga0134121_1270759713300010401Terrestrial SoilMMGLMQGRSRAAAGFLAASIVGLAVSSYLYIWPGNAKAPRWLSEPKVEALVVQAYPATIRSVEMRRGDTLAQALARGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEAT
Ga0137362_1042206723300012205Vadose Zone SoilMMVVMQARLMAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEASPWLSFAARPQDGGWRVGRAETVPELRVEVVKGV
Ga0137362_1102913823300012205Vadose Zone SoilMMVVMQRRSQAVASLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPATLRTVEMRRGDTLAQALARGGLQSRSATLLATQFAKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLSFAARPANGSWRVGLAETVP
Ga0137394_1033549823300012922Vadose Zone SoilMMGVMQKRSLVAAGLLAASFLVLGVSVHRYVWPGMAQAPHWLPEPKVEPLVVPAYPVTVRSVEMKRGDTLVQALARGGLQQRSATLLATQFGKDGADLRRIRAGATIEITWNSRNEPMEVRYEASPWLSFA
Ga0137404_1185168313300012929Vadose Zone SoilMMVVMQRRSQAVASLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPATLRTVEMRRGDTLAQALARGGLQSRSATLLATQFAKNGADLRGIRAGATIEITWNSR
Ga0137407_1071834823300012930Vadose Zone SoilMMDVMRTNVRVATALLTASLTGLAVSTCLYVWPGTARAPRWLPEPTPAAIVVPAFPTTVRSVEMRRGDTLPRALARGGLQSRSATLLATQFAKNGADLRRIRAGATIEITWNSRNEATQ
Ga0137407_1115816423300012930Vadose Zone SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLKDQGG
Ga0126375_1078400323300012948Tropical Forest SoilLWLLIFSVDEAPAVVMMGVMQKRSVAAAGFLTASVLVLAVSVHLYVWPGAAEAPHWLPEPKLEALVVPAYPSTVRKVEMRRGDSLVQALTRGGLPSRSATLLATQFGKNGADLRKIRAGATIEI
Ga0126369_1143383113300012971Tropical Forest SoilMMGVMQKRSLAAAGFLTVSLLVLAVSVHRHVWPGAAEAPHWLPEPKLEALVDPAYPSTVRKVEMRRGDSLVQALARGGLPSRSATLLATQFAKNGADLRRIRAGATIEITWNARSEPMEVRYEASPWVTL
Ga0134077_1032253323300012972Grasslands SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEASPWLSFAARPLDG
Ga0157372_1257798413300013307Corn RhizosphereMQARLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKTEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAASALATQFGKNGADLRRIRGRHDRD
Ga0157379_1113771013300014968Switchgrass RhizosphereMVVMQRRSQAVAGFLAASIIGLAVSSYLYVWPGNAPAPRWLPAPKAEGLVVPAYPATIRSVEMRRGDTLAQALARGGLQSRSATLLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLSFAARPANG
Ga0157376_1259840913300014969Miscanthus RhizosphereMQGRSRAAAGFLAASIVGLAVSSYLYIWPGSAKAPRWLSEPKVEALVVQAYPATIRSVEMRRGDTLAQALARGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEAT
Ga0132257_10417137613300015373Arabidopsis RhizosphereMVVMQRRSQGVVGLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPLTVRSVEMRRGDTLAQALARGGLQSRSATLLAMQFGKNGADLRRIRAGATIEITWN
Ga0182032_1139536913300016357SoilLWLLIFSVYDGPAVVMMGVMQKRSLAAAGFLTMSLLVLAVSVHRHVWPGAAEAPHWLPEPKLEALVVPAYPSTVRKVEMRRGDSLVQALARGGLPSRSATLLATQFAKN
Ga0187775_1000878253300017939Tropical PeatlandMVVMQGRVAIAAGVLATSIVALAVSSYLYVWPGRAPAPHWLSEPKVEALVVPAYPLTVRNVEMKRGDTLAQALARGGLTSRSAIQLAAQFGKNGA
Ga0137408_113304163300019789Vadose Zone SoilMQARVLAVTGLLVASIIGLAMSTYLYVWPGTAPAPHWLSEPKAEVLVVPAFPMTVRSVEMRRGDTLAQALTRGGLPTRAATALATQFGKDGADLRRIRAGATIEITWNARNEPLQVRYEANPWLSFAARPLDGGWRVG
Ga0222622_1112037913300022756Groundwater SedimentMVVMQRRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEGLVVPAYPATVRTVEMRRGDTLAQALARGGLQSRSATLLATQFGKNGADLRRIRAGATIEIIWNSRNEATQVRYEASPWLSFAARPANGSWRVGRAETVPELRVE
Ga0207642_1078734423300025899Miscanthus RhizosphereMMVVVQKRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPTPKAEALVVPAYPVTVRTVEMRRGDTLAQALARGGLQSRSATLLATQFGKNGADLRRIRAGATIEIT
Ga0207685_1073654213300025905Corn, Switchgrass And Miscanthus RhizosphereMQRRSRAAAGFLAASIVGLAVSSYLYIWPGNAKAPRWLSEPKVEALVVQAYPATIRSVEMRRGDTLAQALARGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLSFAA
Ga0207684_1005949653300025910Corn, Switchgrass And Miscanthus RhizosphereMMVVMQARLLAVTGFLVASIAGLAVSTFLYVWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEASPWLSFAARPLDGGWRVGRAETVPELRVEVVKGV
Ga0207644_1038995913300025931Switchgrass RhizosphereMQGRSRAAAGFLAASIVGLAVSSYLYIWPGNAKAPRWLSEPKVEALVVQAYPATIRSVEMRRGDTLAQALARGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLS
Ga0207669_1114432713300025937Miscanthus RhizosphereMMVVMQKRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPTPKAEALVVPAYPVTVRTVEMRRGDTLAQALARGGLRSRSATLLATQFGKNGADLRRIRAGATIEITWNSRNEVTQVRYEASPWLSFAARPANGHWRVGRAETVPELRVEAVSGVVYGSPTELPHTASSTAALSRTVRVRKPSVDI
Ga0207704_1165338413300025938Miscanthus RhizosphereMMVVVQKRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPTPKAEALVVPAYPVTVRTVEMRRGDTLAQALARGGLRSRSATLLATQFGKNGADLRRIRAGATIEITWNSRN
Ga0209438_119370413300026285Grasslands SoilMMVVMQRRSQAVASLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPATLRTVEMRRGDTLAQALARGGLQSRSATLLATQFAKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLSFAARPANGSWRVGLAETVPELRVEA
Ga0209687_123543013300026322SoilMMVVMQARLLAVTGFLVASIAGLAVSTYLYVWPGAAPAPHWLADPKMEPLVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMTVRYEASPWLSFAARPLDGGWR
Ga0209470_125408013300026324SoilMMGVMQKRSLVAAGLLAASFLVLGVSVHRYVWPGMAQAPHWLPEPKVEALFVPAYPVTVRSMEMRRGDTLVQALARGGLQQRSATLLATQFGKNGADLRRIRA
Ga0209801_135325613300026326SoilFLIFPLHGRRALAMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEASPWLSFAARPLDGGWRVGRAETVPELRVEVVKGVV
Ga0209802_101839953300026328SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRR
Ga0209267_103742313300026331SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMAVRYEASPWLSFAARPLDGGWRVGRAETVPEL
Ga0209803_104290213300026332SoilMMVVMQARLMAVTGFLVASIAGLAVSTYLYVWPGAAPAPHWLADPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMA
Ga0209803_134406113300026332SoilMMVVMQARLLAVTGFLVASIAGLAVSTYLYVWPGAAPAPHWLADPKMEPLVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPMTVRYEASPWLSFAARPLDGG
Ga0209057_110072713300026342SoilMMVVMQARLLAVTGFLVASIAGLAVSTFLYIWPGAAPAPHWLPDPKMEALVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEPTTV
Ga0209058_123389613300026536SoilMMVVMQARLLAVTGFLVASIAGLAVSTYLYVWPGAAPAPHWLADPKMEPLVVPAYPLTIRSVEMRRGDTLAQALTRGGLPARAATALATQFGKNGADLRRIRAGATIEITWNARNEP
Ga0209178_118397513300027725Agricultural SoilMAASIVGLVVSSYLYIWPGNAKAPHWLSEPKLEPLVVPAYPMTIRSVEMRRGDTLAQALSRGGLQTRSATQLATQFGKNGADLRRIRAGATIEITWNSRNQATQVRYEASPWLSFAARPWNGSWRVGRAETVPDLRV
Ga0209382_1048144413300027909Populus RhizosphereMQARLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPKTEPLVVPAYPVTVREVEMRRGDTLAQALTRGGLESRAASALATQFGKNGADLRRIRAGATIEITW
Ga0307504_1036763313300028792SoilLAHTRPAVVIMVVMQGRTQAAAGLLAASIAGLAVSSYLYVWPGTARAPRWLAEPKAEVLVVPAYPVTVRGVEMRRGDTLVQALSRGGLQSRSATQLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEASPWLSFAARPANGSWRVGRAETVPELRVEAVNGVVQSSLFDAVERTGESARL
Ga0310888_1076226913300031538SoilMQPRLLAVTGFLVASIAGLAVSSYLYVWPGEAQAPKWLADPRLEPMVVPAYPLTVREVEMRRGDTLAQALTRGGIESRAATALATQFGKNGADLRRIRAGATIEITWNARQWPLQVRYEASPWLSFAARPIPGGGWRVGRAETVPE
Ga0318572_1081368323300031681SoilMMGVMQKRSLAAAGFLTMSLLVLAVSVHRHVWPGAAEAPHWLPEPKLEALVVPAYPSTVRKVEMRRGDSLVQALARGGLPSRSATLLATQFAKNGADLRKIRAGATIEITWNVRSE
Ga0310813_1205002413300031716SoilMVVMQRRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPATIRTVEMRRGDTLAQALARGGLQSRSATLLATQFGKNGADLRRIRA
Ga0318500_1023723013300031724SoilLWLLIFSVYDGPAVVMMGVMQKRSLAAAGFLTMSLLVLAVSVHRHVWPGAAEAPHWLPEPKLEALVVPAYPSTVRKVEMRRGDSLVQALARGGLPSRSAT
Ga0307468_10013334813300031740Hardwood Forest SoilMPKRSLAATALLTASSLLLAVSVYQHVWPGGAPAPRWLPEPNVEALSVPAYPITVRSIEMRRGDSLVQALARGGLPSRSATLLATQFGKNGADLRR
Ga0307473_1115315613300031820Hardwood Forest SoilMVVMQRRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPTPEAEALVVPAYPVTVRTVEMRRGDTLAQALARGGLRSRSATLLATQFGKNGADLRRIRAGAT
Ga0310913_1073343223300031945SoilLWLLIFSVYDGPAVVMMGVMQKRSLAAAGFLTMSLLVLAVSVHRHVWPGAAEAPHWLPEPKLEALVVPAYPSTVRKVEMRRGDSLVQALARGGLPSR
Ga0310903_1064239513300032000SoilMVVMQRRSQAVVGLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPATIRTVEMRRGDTLAQALARGGLQSRSATLLATQFGKNGADLRRIRAGATIEITWNSRNEATQVRYEA
Ga0310899_1054720813300032017SoilMQPRLLAVTGFLVASIAGLAVSSYLYVWPGEAQAPKWLADPRLEPMVVPAYPLTVREVEMRRGDTLAQALTRGGIESRAATALATQFGKNGADLRRIRAGATIEITWNARQWPLQVRYEASPWLSFAARPANGSWRVGRAETVPELRVEAVSGVVQRSL
Ga0318575_1048427823300032055SoilMQRRTQAAAGLLVASIVGLAVSSFLYIWPGNAPAPHWLSEPKVEALVVPAYPVTLRSVEMKRGETLAQALGRSGLQSRSAFQLANQFGKNGADLRRIRAGATVEV
Ga0318553_1000386453300032068SoilLLIFSVYDGPAVVMMGVMQKRSLAAAGFLTMSLLVLAVSVHRHVWPGAAEAPHWLPEPKLEALVVPAYPSTVRKVEMRRGDSLVQALARGGLPSRSATLLATQFAK
Ga0307471_10079254713300032180Hardwood Forest SoilMQRRSQAAAGLLAASLVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPATVRTVEMLRGDTLAQALARGGLQSRSATLLARQFGKNGADLR
Ga0307471_10323956413300032180Hardwood Forest SoilMQPRLLAVTGFLVASIAGLAVSSYLYVWPGAAPAPKWLADPAIEPLVVPAYPVTVCEVEMRRGDTLAQALTRAGLESRAATALATQFGKNGADLRRIRAGATIEITWNARQWPLQVRYEASPWLSFAARPIPGGGWRVGRAETVPELR
Ga0307472_10176331513300032205Hardwood Forest SoilMVVMQRRSQAVAGLLAASIVGLAVSSYLYVWPGNAPAPRWLPAPKAEALVVPAYPATVRTVEMRRGDTLAQALARGGLQSRSATQLATQFGKNGADLRRIRAGATIEITW
Ga0306920_10061682033300032261SoilMQRRTQAAAGLLVASIVGLAVSSFLYIWPGNAPAPHWLSEPKVEALVVPAYPVTLRSVEMKRGETLAQALGRSGLQSRSAIQLANQFGKNGADLRRI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.