NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105966

Metagenome / Metatranscriptome Family F105966

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105966
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 49 residues
Representative Sequence MEKDGNRICDSCGQKIPSMSKLASKENGKDLCLACQIRLAQIEKGLRH
Number of Associated Samples 85
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 11.00 %
% of genes near scaffold ends (potentially truncated) 35.00 %
% of genes from short scaffolds (< 2000 bps) 86.00 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (72.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere
(9.000 % of family members)
Environment Ontology (ENVO) Unclassified
(44.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.79%    β-sheet: 14.47%    Coil/Unstructured: 69.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02225PA 19.00
PF04389Peptidase_M28 9.00
PF00873ACR_tran 4.00
PF01039Carboxyl_trans 3.00
PF00753Lactamase_B 2.00
PF00583Acetyltransf_1 1.00
PF00903Glyoxalase 1.00
PF02540NAD_synthase 1.00
PF01435Peptidase_M48 1.00
PF01795Methyltransf_5 1.00
PF07676PD40 1.00
PF00691OmpA 1.00
PF01610DDE_Tnp_ISL3 1.00
PF00069Pkinase 1.00
PF14714KH_dom-like 1.00
PF06108DUF952 1.00
PF02554CstA 1.00
PF13442Cytochrome_CBB3 1.00
PF02899Phage_int_SAM_1 1.00
PF12867DinB_2 1.00
PF10518TAT_signal 1.00
PF03793PASTA 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 4.00
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 3.00
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 3.00
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 3.00
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 1.00
COG027516S rRNA C1402 N4-methylase RsmHTranslation, ribosomal structure and biogenesis [J] 1.00
COG1966Carbon starvation protein CstA (peptide/pyruvate transporter)Energy production and conversion [C] 1.00
COG3464TransposaseMobilome: prophages, transposons [X] 1.00
COG3502Uncharacterized conserved protein, DUF952 familyFunction unknown [S] 1.00
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 1.00
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.00 %
UnclassifiedrootN/A28.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10196594All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300001213|JGIcombinedJ13530_102404898Not Available734Open in IMG/M
3300001372|YBBDRAFT_1251852Not Available2176Open in IMG/M
3300001850|RCM37_1129634All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076661Open in IMG/M
3300005328|Ga0070676_10442983All Organisms → cellular organisms → Bacteria → Acidobacteria912Open in IMG/M
3300005329|Ga0070683_100034650All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA64613Open in IMG/M
3300005329|Ga0070683_100164440All Organisms → cellular organisms → Bacteria → Acidobacteria2105Open in IMG/M
3300005334|Ga0068869_100340994Not Available1219Open in IMG/M
3300005334|Ga0068869_100342783All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300005340|Ga0070689_100484124Not Available1057Open in IMG/M
3300005340|Ga0070689_100846739All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300005367|Ga0070667_101483155Not Available637Open in IMG/M
3300005444|Ga0070694_101680786All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium540Open in IMG/M
3300005459|Ga0068867_100345224All Organisms → cellular organisms → Bacteria → Acidobacteria1241Open in IMG/M
3300005459|Ga0068867_101506467Not Available626Open in IMG/M
3300005468|Ga0070707_102113427All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300005518|Ga0070699_101815037All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300005535|Ga0070684_100463998All Organisms → cellular organisms → Bacteria → Acidobacteria1171Open in IMG/M
3300005535|Ga0070684_101022945All Organisms → cellular organisms → Bacteria → Acidobacteria776Open in IMG/M
3300005539|Ga0068853_100979344All Organisms → cellular organisms → Bacteria → Acidobacteria814Open in IMG/M
3300005549|Ga0070704_101137497All Organisms → cellular organisms → Bacteria → Acidobacteria710Open in IMG/M
3300005577|Ga0068857_100552595All Organisms → cellular organisms → Bacteria → Acidobacteria1085Open in IMG/M
3300005614|Ga0068856_100923402All Organisms → cellular organisms → Bacteria → Acidobacteria892Open in IMG/M
3300005614|Ga0068856_101070770All Organisms → cellular organisms → Bacteria → Acidobacteria824Open in IMG/M
3300005616|Ga0068852_100364264All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium1415Open in IMG/M
3300005836|Ga0074470_11070666All Organisms → cellular organisms → Bacteria19111Open in IMG/M
3300005842|Ga0068858_100339360All Organisms → cellular organisms → Bacteria → Acidobacteria1438Open in IMG/M
3300005842|Ga0068858_100862529Not Available884Open in IMG/M
3300006052|Ga0075029_100227435All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300006059|Ga0075017_100148699All Organisms → cellular organisms → Bacteria → Acidobacteria1666Open in IMG/M
3300006059|Ga0075017_100208150All Organisms → cellular organisms → Bacteria1417Open in IMG/M
3300006163|Ga0070715_10637525Not Available629Open in IMG/M
3300006354|Ga0075021_10160793All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300006358|Ga0068871_100571947All Organisms → cellular organisms → Bacteria → Acidobacteria1025Open in IMG/M
3300006358|Ga0068871_100660769All Organisms → cellular organisms → Bacteria → Acidobacteria955Open in IMG/M
3300006638|Ga0075522_10024457All Organisms → cellular organisms → Bacteria3747Open in IMG/M
3300006755|Ga0079222_10506912Not Available886Open in IMG/M
3300006806|Ga0079220_12018613All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300006954|Ga0079219_11161890All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300009098|Ga0105245_10220432All Organisms → cellular organisms → Bacteria → Acidobacteria1830Open in IMG/M
3300009098|Ga0105245_10925754All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300009098|Ga0105245_11327743Not Available768Open in IMG/M
3300009101|Ga0105247_11362550Not Available572Open in IMG/M
3300009148|Ga0105243_10076878All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2714Open in IMG/M
3300009148|Ga0105243_10166354All Organisms → cellular organisms → Bacteria → Acidobacteria1906Open in IMG/M
3300009161|Ga0114966_10261979All Organisms → cellular organisms → Bacteria → Acidobacteria1062Open in IMG/M
3300009176|Ga0105242_11196886Not Available779Open in IMG/M
3300010375|Ga0105239_10970218All Organisms → cellular organisms → Bacteria → Acidobacteria977Open in IMG/M
3300010401|Ga0134121_10225054All Organisms → cellular organisms → Bacteria → Acidobacteria1631Open in IMG/M
3300012929|Ga0137404_11481815All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300013102|Ga0157371_11287234Not Available565Open in IMG/M
3300013105|Ga0157369_10127579All Organisms → cellular organisms → Bacteria → Acidobacteria2696Open in IMG/M
3300013297|Ga0157378_11513184Not Available716Open in IMG/M
3300013308|Ga0157375_11779480All Organisms → cellular organisms → Bacteria → Acidobacteria730Open in IMG/M
3300013308|Ga0157375_12305054All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300014325|Ga0163163_10445219All Organisms → cellular organisms → Bacteria → Acidobacteria1355Open in IMG/M
3300014326|Ga0157380_12148811All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae622Open in IMG/M
3300014492|Ga0182013_10033218All Organisms → cellular organisms → Bacteria → Acidobacteria4263Open in IMG/M
3300014499|Ga0182012_10112447All Organisms → cellular organisms → Bacteria → Acidobacteria2022Open in IMG/M
3300014501|Ga0182024_11312385All Organisms → cellular organisms → Bacteria → Acidobacteria838Open in IMG/M
3300014657|Ga0181522_10948062All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300014969|Ga0157376_11087783All Organisms → cellular organisms → Bacteria → Acidobacteria825Open in IMG/M
3300018062|Ga0187784_10478341All Organisms → cellular organisms → Bacteria → Acidobacteria1004Open in IMG/M
3300018064|Ga0187773_10070007All Organisms → cellular organisms → Bacteria → Acidobacteria1663Open in IMG/M
3300018090|Ga0187770_10597792Not Available877Open in IMG/M
3300018482|Ga0066669_11557368Not Available602Open in IMG/M
3300021170|Ga0210400_10238065All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1486Open in IMG/M
3300021432|Ga0210384_11017544All Organisms → cellular organisms → Bacteria → Acidobacteria731Open in IMG/M
3300021859|Ga0210334_10933661All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium531Open in IMG/M
3300022213|Ga0224500_10357131Not Available528Open in IMG/M
3300025324|Ga0209640_11407271Not Available509Open in IMG/M
3300025905|Ga0207685_10599161Not Available591Open in IMG/M
3300025911|Ga0207654_10111016Not Available1706Open in IMG/M
3300025916|Ga0207663_10075404All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2189Open in IMG/M
3300025924|Ga0207694_10116141All Organisms → cellular organisms → Bacteria → Acidobacteria2133Open in IMG/M
3300025932|Ga0207690_10390835All Organisms → cellular organisms → Bacteria → Acidobacteria1107Open in IMG/M
3300025934|Ga0207686_10291656Not Available1208Open in IMG/M
3300025936|Ga0207670_10153751All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1710Open in IMG/M
3300025944|Ga0207661_10003969All Organisms → cellular organisms → Bacteria → Acidobacteria10336Open in IMG/M
3300026035|Ga0207703_10847261All Organisms → cellular organisms → Bacteria → Acidobacteria874Open in IMG/M
3300026035|Ga0207703_11609399Not Available625Open in IMG/M
3300026041|Ga0207639_11867464Not Available562Open in IMG/M
3300026075|Ga0207708_10574596Not Available953Open in IMG/M
3300026089|Ga0207648_10796123All Organisms → cellular organisms → Bacteria → Acidobacteria880Open in IMG/M
3300026116|Ga0207674_10524155All Organisms → cellular organisms → Bacteria → Acidobacteria1145Open in IMG/M
3300026142|Ga0207698_10158930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1974Open in IMG/M
3300026142|Ga0207698_11794076All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium629Open in IMG/M
3300026320|Ga0209131_1019396All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4104Open in IMG/M
3300027775|Ga0209177_10231436All Organisms → cellular organisms → Bacteria → Acidobacteria673Open in IMG/M
3300027831|Ga0209797_10360046Not Available597Open in IMG/M
3300027842|Ga0209580_10170528All Organisms → cellular organisms → Bacteria → Acidobacteria1075Open in IMG/M
3300027894|Ga0209068_10033850All Organisms → cellular organisms → Bacteria2541Open in IMG/M
3300027915|Ga0209069_10198612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae1022Open in IMG/M
3300029913|Ga0311362_10964582Not Available673Open in IMG/M
3300029917|Ga0311326_10574734All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300030019|Ga0311348_11389643All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300030943|Ga0311366_11844802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300031720|Ga0307469_12042931All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300031902|Ga0302322_102369146Not Available654Open in IMG/M
3300032144|Ga0315910_10729761Not Available770Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere9.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere7.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere5.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.00%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen3.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.00%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog2.00%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.00%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.00%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.00%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton1.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.00%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine1.00%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.00%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment1.00%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.00%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.00%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001372YB-Back-sedEnvironmentalOpen in IMG/M
3300001850Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2aEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021859Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022213Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300029913III_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029917I_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1019659413300000567Peatlands SoilMERDGIRTCDSCGQRIPPMSKLATRQDGPDGKDVCLACQIRVAQIEKGLRH*
JGIcombinedJ13530_10240489823300001213WetlandMEKDGQRYCDGCGQVIPKMSKLASKEGDKDYCLSCSIRKAQDEKGLKH*
YBBDRAFT_125185233300001372Marine EstuarineIIAYMEKDGKRVCDGCGKLIPQKAMLAAKENGKDLCLACQIREAQITKGLRH*
RCM37_112963423300001850Marine PlanktonMEKDGVRCCDGCGQVIPKMSKLATKGPDGRDLCLACQIRESEIRKGLR*
Ga0070676_1044298323300005328Miscanthus RhizosphereMEKDGNRYCDSCGQKIPSMSKLASKEDGKDFCLACQIRQSEINKGLRP*
Ga0070683_10003465023300005329Corn RhizosphereMERDGIRTCDSCGQRIPPMSKLATRQEGPDGKDLCLACQIRLAQVEKGLRH*
Ga0070683_10016444023300005329Corn RhizosphereMEKDGNRYCDSCGQKIPSMSKLASKEGSKDFCLACQIRQSEINKGLRP*
Ga0068869_10034099423300005334Miscanthus RhizosphereMEKDGNRYCDSCGQKIPSMSKLASKEGAKDFCLACQIRQSEINKGLRP*
Ga0068869_10034278323300005334Miscanthus RhizosphereMEKDGNRYCDSCGQKIPSMSKLASKEGGKDFCLACQIRQSEINKGLRP*
Ga0070689_10048412413300005340Switchgrass RhizosphereMERDGIRTCDSCGQRIPPMSKLASRENGQDLCLACQIRLAQIEKGLRH*
Ga0070689_10084673923300005340Switchgrass RhizosphereMEKDGQRICDKCGQKIPSMSKLATRENGRDLCLACQIREAQDEKGLRH*
Ga0070667_10148315523300005367Switchgrass RhizosphereMEKDGERICDGCGQRIPRMSKLALQQDGKDLCLQCQIRDAQINKGLRH*
Ga0070694_10168078623300005444Corn, Switchgrass And Miscanthus RhizosphereMQKDGERICDGCGQKIPRMSKLALQQDGKDLCLQCQIRDAQINKGLRH*
Ga0068867_10034522413300005459Miscanthus RhizosphereHRDMEKDGNRYCDSCGQKIPSMSKLASKEGGKDFCLACQIRQSEINKGLRP*
Ga0068867_10150646723300005459Miscanthus RhizosphereSMEKDGVRTCDSCGQRIPSMSKLAAKSADGRDLCLACKIRESEIKKGLGL*
Ga0070707_10211342723300005468Corn, Switchgrass And Miscanthus RhizosphereMEKDGNRFCDSCGQKIPSMSKLASKEGGKDFCLACQIRQSEINKGLRP*
Ga0070699_10181503713300005518Corn, Switchgrass And Miscanthus RhizosphereRICDGCGQKIPRMSKLALQQDGKDLCLQCQIRDAQINKGLRH*
Ga0070684_10046399823300005535Corn RhizosphereHMERDGIRTCDSCGQRIPPMSKLSSQKDGKDLCLACQIRLAQIEKGLRH*
Ga0070684_10102294513300005535Corn RhizosphereMEKDGNRYCDSCGQKIPSMSKLASKEGGRDFCLACQIRQSEINKGLRP*
Ga0068853_10097934413300005539Corn RhizosphereDGNRYCDSCGQKIPSMSKLASKEDGKDFCLACQIRQSEINKGLRP*
Ga0070704_10113749713300005549Corn, Switchgrass And Miscanthus RhizosphereRRSRYDRCMQKDGERICDGCGQKIPRMSKLALQQDGKDLCLQCQIRDAQINKGLRH*
Ga0068857_10055259513300005577Corn RhizosphereARYHRGMEKDGNRYCDSCGQKIPSMAKLASKEDGKDFCLACQIRQAQIAKGLRH*
Ga0068856_10092340233300005614Corn RhizosphereMEKDGNRYCDSCGQKIPTMAKLASKEDGKDFCLACQIRQAQIAKGLRH*
Ga0068856_10107077013300005614Corn RhizosphereRIPPVSKLAAHQDGKDLCLACQIRLAQIEKGLRH*
Ga0068852_10036426443300005616Corn RhizosphereMEKDGKRVCDGCGQTIPMMSKLASKEDGRDLCLQCQIRDAQIHKGLKH*
Ga0074470_1107066623300005836Sediment (Intertidal)MEKDGDRYCDSCGQVIPKMSKLASTEGGQDLCLACKIRKAQIEKGLHH*
Ga0068858_10033936023300005842Switchgrass RhizosphereCDSCGQRIPPMSKLAARQDGPDGKDLCLACQIRLAQIEKGLRH*
Ga0068858_10086252923300005842Switchgrass RhizosphereMEKDGQRICDRCGLKIPSMSKLATRENGRDLCLACQIREAQEEKGLRH*
Ga0075029_10022743523300006052WatershedsMGKTDMEKDGVRVCDGCGQPIPKKAMLAIKENGQALCLACQIRDAQINKGLRH*
Ga0075017_10014869923300006059WatershedsMEKDGNRICDSCGQKIPSMSKLASKENGKDLCLACQIRLAQIEKGLRH*
Ga0075017_10020815023300006059WatershedsMKFMEQNQQRVCAGCGQPIPSMSKLAQKTADGKELCLACQIREAEIRKGR*
Ga0070715_1063752513300006163Corn, Switchgrass And Miscanthus RhizosphereCDSCGQRIPPMSKLASHQEGKDLCLACQIRLAQVEKGLRH*
Ga0075021_1016079323300006354WatershedsMEKDGQRFCDDCGKPIPLQAKLAEKTAEGKDRCLACQIRDAQITKGLRH*
Ga0068871_10057194713300006358Miscanthus RhizosphereERDGIRTCDSCGQRIPPMSKLASRENGQDLCLACQIRLAQIEKGLRH*
Ga0068871_10066076923300006358Miscanthus RhizosphereYCDSCGQKIPSMSKLASKEGGKDFCLACQIRQSEINKGLRP*
Ga0075522_1002445733300006638Arctic Peat SoilMEKDGERTCDGCGQPIPKMSKLALKSEDGKDLCLACQIRESERKKGLRP*
Ga0079222_1050691223300006755Agricultural SoilMERDGVRTCDSCGQKIPPMSKLASKEHGKDLCLACQIRLAQIEKGLRH*
Ga0079220_1201861313300006806Agricultural SoilMEKDGNRHCDSCGQKIPSMSKLASKEDGKDFCLACQIRQSEINKGLRP*
Ga0079219_1116189013300006954Agricultural SoilMEKDGKRICDSCGQPIPSMSKLASRENGKDFCLACQIRQAEIAKGLRQ*
Ga0105245_1022043223300009098Miscanthus RhizosphereMEKDGQRICDKCGQRIPSTSKLSTRENGKDLCLACQIREAQDEKGLRH*
Ga0105245_1092575413300009098Miscanthus RhizosphereHMERDGIRTCDSCGQRIPPMSKLASREDDKDLCLACQIRLAQVEKGLRH*
Ga0105245_1132774323300009098Miscanthus RhizosphereMEKDGQRICDRCGLKIPSMFKLATHENGRDLCLACQIREAQEEKGLRH*
Ga0105247_1136255023300009101Switchgrass RhizosphereHPAPRARYHQSMEKDGSRYCDSCGQKIPSMSKLASKEGAKDFCLACQIRQSEINKGLRP*
Ga0105243_1007687813300009148Miscanthus RhizosphereGQRIPPMSKLASRENGQDLCLACQIRLAQIEKGLRH*
Ga0105243_1016635423300009148Miscanthus RhizosphereMEKDGQRICDRCGLKIPSMSKLATRSGVDGAGRDLCLACQIREAQEEKGLRH*
Ga0114966_1026197913300009161Freshwater LakeMEKDGVRVCDGCGHRIPSMSKLAVKEGGRDLCLQCQIKDAQINKGLKH*
Ga0105242_1119688623300009176Miscanthus RhizosphereMEKDGQRICDRCGLKIPSMSKLATHENGRDLCLACQIREAQEEKGLRH*
Ga0105239_1097021823300010375Corn RhizosphereMEKDGNRYCDSCGQKIPSMAKLASKEDGKDFCLACQIRQAQIAKGLRH*
Ga0134121_1022505423300010401Terrestrial SoilMEKDGERICDGCGQKIPRMSKLALQQDGKDLCLQCQIRDAQINKGLRH*
Ga0137404_1148181523300012929Vadose Zone SoilMVKNGERICDGCGQKIPSMSKLAIQQDGNDLCLQCQIREAQIAKGLRH*
Ga0157371_1128723423300013102Corn RhizosphereMEKDGVRTCDACGQRIPPFSKLAAKSSDGRDLCLACRIRESEIKKGLGL*
Ga0157369_1012757923300013105Corn RhizosphereMEQDGIRTCDSCGQRIPPMSKLATRQDNKDLCLACQIRLAQIQKGLRH*
Ga0157378_1151318423300013297Miscanthus RhizosphereVERDGIRTCDSCGQRIPPMSKLASREDDKDLCLACQIRLAQVEKGLRH*
Ga0157375_1177948013300013308Miscanthus RhizosphereMERDGIRTCDSCGQRIPPMSKLASREDDKDLCLACQIRLAQIEKGLRH*
Ga0157375_1230505423300013308Miscanthus RhizosphereMEKDGNRYCDSCGQKIPSMSKLASKEGGKDVCLACQIRQSEINKGLRP*
Ga0163163_1044521913300014325Switchgrass RhizosphereARYHRGMEKDGNRFCDSCGQKIPSMSKLASKEGGKDFCLACQIRQSEINKGLRP*
Ga0157380_1214881123300014326Switchgrass RhizosphereMEKDGKRICDKCGQKIPSMSKLATRENGRDSCLACQIREAQDEKGLRH*
Ga0182013_1003321823300014492BogMKFMEKDGERICDLCGQTIPKMSKLALKQDGKDLCLACQIREAERQKRPL*
Ga0182012_1011244713300014499BogMKFMEKDGERICDLCGQTIPKMSKLALKQDGKDLCLACQIREAERQKRP
Ga0182024_1131238513300014501PermafrostIRTCDSCGQRIPPMSKLATRQGDKDLCLACQIRLAQIEKGLRH*
Ga0181522_1094806213300014657BogERICDLCGQTIPKMSKLAWKQDGKDLCLACQIRESERRKPR*
Ga0157376_1108778323300014969Miscanthus RhizosphereICDRCGLKIPSMSKLATHENGRDLCLACQIREAQEEKGLRH*
Ga0187784_1047834123300018062Tropical PeatlandMEKDGERFCDACGQPIPKVSKLAVKEDGKDFCLACQIRESERKKGLRP
Ga0187773_1007000723300018064Tropical PeatlandMEKDGERTCDGCGQPIPKMSKLALKSEDGKDLCLACQIRESERKKGLRP
Ga0187770_1059779213300018090Tropical PeatlandMQKDGERFCDGCGQPIPKMSKLARNEDGKDFCLACQIRESERKKGLRP
Ga0066669_1155736833300018482Grasslands SoilMEKDGNRYCDSCGQKIPSMSKLASKEGGKDFCLACQIRQSEINKGLRP
Ga0210400_1023806553300021170SoilMERDGIRTCDSCGQRIPPMSKLATRQEGPDGKDVCLACQIRLAQIEKGLRH
Ga0210384_1101754423300021432SoilMEKDGDRHCDQCGQKIPKMAKLAVQQSGRDLCLACQIRLAQIEKGLRH
Ga0210334_1093366123300021859EstuarineMEKDGVKVCDGCGQRIPSMSKLATKEGDRDLCLQCQIKDAQVTKGLKH
Ga0224500_1035713123300022213SedimentMEKDGKRICDGCGQTIPSMSKLAVKEGGRDLCLQCQIKDAQINKGLKH
Ga0209640_1140727123300025324SoilMEKDGERVCDSCGQKIPKMSKLATREGGRDLCLACQIREAQIHKGLRH
Ga0207685_1059916113300025905Corn, Switchgrass And Miscanthus RhizosphereRFRRRVTICFMEQDGIRTCDSCGQRIPPMSKLASRQDGKDLCLACQIRLAQTEKGLRH
Ga0207654_1011101623300025911Corn RhizosphereMEKDGNRYCDSCGQKIPSMSKLASKEGSKDFCLACQIRQSEINKGLRP
Ga0207663_1007540413300025916Corn, Switchgrass And Miscanthus RhizosphereCDSCGQRIPPMSKLATRQDGPEGRDLCLACQIRLAQIEKGLRH
Ga0207694_1011614133300025924Corn RhizosphereDGIRTCDSCGQRIPPMSKLATRQDNKDLCLACQIRLAQIQKGLRH
Ga0207690_1039083523300025932Corn RhizosphereRARYHRDMEKDGNRYCDSCGQKIPSMSKLASKEDGKDFCLACQIRQSEINKGLRP
Ga0207686_1029165633300025934Miscanthus RhizosphereMEKDGNRYCDSCGQKIPSMSKLASREGGKDFCLACQIRQSEINKGLRP
Ga0207670_1015375123300025936Switchgrass RhizosphereMEKDGQRICDKCGQKIPSMSKLATRENGRDLCLACQIREAQDEKGLRH
Ga0207661_1000396923300025944Corn RhizosphereVRSAPRYHRHMERDGIRTCDSCGQRIPPMSKLSSQKDGKDLCLACQIRLAQIEKGLRH
Ga0207703_1084726113300026035Switchgrass RhizosphereHRDMEKDGNRYCDSCGQKIPSMSKLASKEDGKDFCLACQIRQSEINKGLRP
Ga0207703_1160939913300026035Switchgrass RhizosphereCDSCGQRIPPMSKLAARQDGPDGKDLCLACQIRLAQIEKGLRH
Ga0207639_1186746413300026041Corn RhizosphereYCDSCGQKIPSMSKLASKEDGKDFCLACQIRQSEINKGLRP
Ga0207708_1057459613300026075Corn, Switchgrass And Miscanthus RhizosphereMQKDGERICDGCGQKIPRMSKLALQQDGKDLCLQCQIRDAQINKGLRH
Ga0207648_1079612313300026089Miscanthus RhizosphereRDMEKDGNRYCDSCGQKIPSMSKLASKEGGKDFCLACQIRQSEINKGLRP
Ga0207674_1052415523300026116Corn RhizosphereARYHRGMEKDGNRYCDSCGQKIPSMAKLASKEDGKDFCLACQIRQAQIAKGLRH
Ga0207698_1015893033300026142Corn RhizosphereMEKDGNRYCDSCGQKIPSMSKLASKEDGKDFCLACQIRQSEITKGLRP
Ga0207698_1179407623300026142Corn RhizosphereMEKDGKRVCDGCGQTIPMMSKLASKEDGRDLCLQCQIRDAQIHKGLKH
Ga0209131_101939633300026320Grasslands SoilMLKDGETDAVRICHVCGQKIPSMSKLAIQQDGKDICLQCQIRDAQINKGLRH
Ga0209177_1023143623300027775Agricultural SoilMERDGVRTCDSCGQKIPPMSKLASKEHGKDLCLACQIRLAQIEKGLRH
Ga0209797_1036004623300027831Wetland SedimentMEKDGVKLCDGCGQRIPSMSKLAVKEGGRDLCLQCQIKDAQINKGLKH
Ga0209580_1017052823300027842Surface SoilMERDGIRTCDSCGQKIPPMSKLAAREDGKDFCLACQIRLAQIEKGLRH
Ga0209068_1003385023300027894WatershedsMEKDGQRFCDDCGKPIPLQAKLAEKTAEGKDRCLACQIRDAQITKGLRH
Ga0209069_1019861233300027915WatershedsMQKDGQRFCDHCGKPIPSMSKLAMKTDDGKDLCLACQIQDAQLTKGLRH
Ga0311362_1096458213300029913BogMKFMEKDGERICDLCGQTIPKMSKLALKQDGKDLCLACQIREAERQKRPL
Ga0311326_1057473413300029917BogAFARTMKFMEKDGERICDLCGQTIPKMSKLALKQDGKDLCLACQIREAERQKRPL
Ga0311348_1138964313300030019FenNKSMEKDGERICDLCGQTIPKMSKLALKQDGKDLCLACQIRESERQKRLRP
Ga0311366_1184480223300030943FenMEKDGERICDLCGQTIPKMSKLALKQDGKDLCLACQIRESERQKRLRP
Ga0307469_1204293123300031720Hardwood Forest SoilMERDGVRTCDSCGQRIPPMSKLASHQEGKDLCLACQIRLAQIEKGLRH
Ga0302322_10236914623300031902FenMRLYYRAGRVIITVMEKDGERVCDGCGRPIPKKAMLATKENGKDLCLACQIRDAQITKGLRH
Ga0315910_1072976123300032144SoilCVTILSGEEFMEKDGVRVCDGCGQRIPSKSKLAVKEGGRDLCLQCQIKDAQINKGLKH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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