NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F106009

Metagenome Family F106009

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F106009
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 52 residues
Representative Sequence MTNPPPASDGMVVYDNVSKFFPVRIRPGQKDRPELMVALDRINATVRKGELI
Number of Associated Samples 87
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 47.00 %
% of genes near scaffold ends (potentially truncated) 95.00 %
% of genes from short scaffolds (< 2000 bps) 89.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(13.000 % of family members)
Environment Ontology (ENVO) Unclassified
(23.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 10.00%    Coil/Unstructured: 90.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF09084NMT1 38.00
PF13533Biotin_lipoyl_2 2.00
PF00005ABC_tran 2.00
PF03401TctC 1.00
PF12974Phosphonate-bd 1.00
PF00497SBP_bac_3 1.00
PF09099Qn_am_d_aIII 1.00
PF00171Aldedh 1.00
PF00589Phage_integrase 1.00
PF01042Ribonuc_L-PSP 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 38.00
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 38.00
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 1.00
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 1.00
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 1.00
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.00
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.00 %
UnclassifiedrootN/A3.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459004|F62QY1Z01D8BLLAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium501Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100233484Not Available525Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101923074All Organisms → cellular organisms → Bacteria → Proteobacteria1742Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1006609All Organisms → cellular organisms → Bacteria2214Open in IMG/M
3300000955|JGI1027J12803_109292936All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1997Open in IMG/M
3300004633|Ga0066395_10271791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium916Open in IMG/M
3300005093|Ga0062594_101447410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium701Open in IMG/M
3300005330|Ga0070690_101534316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium539Open in IMG/M
3300005332|Ga0066388_100358175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2105Open in IMG/M
3300005332|Ga0066388_103584026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium792Open in IMG/M
3300005332|Ga0066388_107653065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium541Open in IMG/M
3300005340|Ga0070689_100559168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium986Open in IMG/M
3300005344|Ga0070661_101082002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium667Open in IMG/M
3300005441|Ga0070700_100368728All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1070Open in IMG/M
3300005444|Ga0070694_100254522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1330Open in IMG/M
3300005456|Ga0070678_100724505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium898Open in IMG/M
3300005559|Ga0066700_11013286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium546Open in IMG/M
3300005563|Ga0068855_101306495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium751Open in IMG/M
3300005598|Ga0066706_11264050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium559Open in IMG/M
3300005764|Ga0066903_104507099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium743Open in IMG/M
3300005764|Ga0066903_109175005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium500Open in IMG/M
3300006034|Ga0066656_10466329All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300006034|Ga0066656_10682919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales660Open in IMG/M
3300006049|Ga0075417_10445871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales645Open in IMG/M
3300006163|Ga0070715_10160893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1109Open in IMG/M
3300006791|Ga0066653_10522306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium601Open in IMG/M
3300006794|Ga0066658_10678952All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300006903|Ga0075426_10192407All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1478Open in IMG/M
3300007076|Ga0075435_101943765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium516Open in IMG/M
3300007788|Ga0099795_10458122All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium588Open in IMG/M
3300007790|Ga0105679_10971992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1439Open in IMG/M
3300009088|Ga0099830_10952231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium710Open in IMG/M
3300009092|Ga0105250_10255778All Organisms → cellular organisms → Bacteria → Proteobacteria749Open in IMG/M
3300009100|Ga0075418_10995285All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium907Open in IMG/M
3300009101|Ga0105247_11265181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium591Open in IMG/M
3300009137|Ga0066709_100030043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5739Open in IMG/M
3300009143|Ga0099792_10001788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8035Open in IMG/M
3300009147|Ga0114129_10607453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1416Open in IMG/M
3300009162|Ga0075423_12763748All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium537Open in IMG/M
3300009792|Ga0126374_10305928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1068Open in IMG/M
3300010047|Ga0126382_11799114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium576Open in IMG/M
3300010358|Ga0126370_10681581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium900Open in IMG/M
3300010358|Ga0126370_11612203All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium621Open in IMG/M
3300010360|Ga0126372_12951155All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium527Open in IMG/M
3300010366|Ga0126379_12794740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium584Open in IMG/M
3300010376|Ga0126381_101217882All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1088Open in IMG/M
3300010863|Ga0124850_1122783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium663Open in IMG/M
3300012204|Ga0137374_10044860All Organisms → cellular organisms → Bacteria → Proteobacteria4627Open in IMG/M
3300012204|Ga0137374_10446798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1016Open in IMG/M
3300012210|Ga0137378_11686469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium540Open in IMG/M
3300012350|Ga0137372_10118135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2201Open in IMG/M
3300012353|Ga0137367_10793242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium658Open in IMG/M
3300012532|Ga0137373_10254162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1417Open in IMG/M
3300012948|Ga0126375_11989889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium513Open in IMG/M
3300012958|Ga0164299_10483483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium819Open in IMG/M
3300012960|Ga0164301_10080608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1800Open in IMG/M
3300012961|Ga0164302_11564747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium546Open in IMG/M
3300012986|Ga0164304_10659003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium790Open in IMG/M
3300013307|Ga0157372_12134905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium644Open in IMG/M
3300014154|Ga0134075_10485540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria552Open in IMG/M
3300014654|Ga0181525_10097299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1630Open in IMG/M
3300015373|Ga0132257_102613775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium657Open in IMG/M
3300015373|Ga0132257_104605351Not Available502Open in IMG/M
3300015374|Ga0132255_100752250All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1451Open in IMG/M
3300015374|Ga0132255_103104129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium709Open in IMG/M
3300018054|Ga0184621_10302807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium564Open in IMG/M
3300018085|Ga0187772_11183163Not Available563Open in IMG/M
3300018085|Ga0187772_11334121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium531Open in IMG/M
3300021560|Ga0126371_10355236All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1601Open in IMG/M
3300025911|Ga0207654_10460341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium893Open in IMG/M
3300025972|Ga0207668_11278507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium660Open in IMG/M
3300026118|Ga0207675_100667203All Organisms → cellular organisms → Bacteria → Acidobacteria1047Open in IMG/M
3300026310|Ga0209239_1016324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3785Open in IMG/M
3300026532|Ga0209160_1329701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium521Open in IMG/M
3300026855|Ga0208404_1005974All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium525Open in IMG/M
3300028707|Ga0307291_1057096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium945Open in IMG/M
3300028717|Ga0307298_10057086All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300028718|Ga0307307_10004438All Organisms → cellular organisms → Bacteria → Proteobacteria3573Open in IMG/M
3300028787|Ga0307323_10078276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1178Open in IMG/M
3300028819|Ga0307296_10406065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium744Open in IMG/M
3300028819|Ga0307296_10463129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium693Open in IMG/M
3300031231|Ga0170824_111098848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium506Open in IMG/M
3300031564|Ga0318573_10013626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3510Open in IMG/M
3300031640|Ga0318555_10239500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium980Open in IMG/M
3300031682|Ga0318560_10585352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium604Open in IMG/M
3300031723|Ga0318493_10011318All Organisms → cellular organisms → Bacteria → Proteobacteria3706Open in IMG/M
3300031769|Ga0318526_10049906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1593Open in IMG/M
3300031781|Ga0318547_10054914All Organisms → cellular organisms → Bacteria → Proteobacteria2157Open in IMG/M
3300031781|Ga0318547_10291107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium990Open in IMG/M
3300031832|Ga0318499_10039442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1734Open in IMG/M
3300031845|Ga0318511_10160824All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium985Open in IMG/M
3300031879|Ga0306919_10617004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium836Open in IMG/M
3300031941|Ga0310912_10743575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium759Open in IMG/M
3300031959|Ga0318530_10305865All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium657Open in IMG/M
3300032063|Ga0318504_10146527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1085Open in IMG/M
3300032068|Ga0318553_10572644All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium591Open in IMG/M
3300032261|Ga0306920_100739588All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1447Open in IMG/M
3300032261|Ga0306920_102108987All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium786Open in IMG/M
3300032421|Ga0310812_10480441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium559Open in IMG/M
3300032892|Ga0335081_10383508All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1815Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459004Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026855Soil and rhizosphere microbial communities from Laval, Canada - mgLMA (SPAdes)EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4B_007859802170459004Grass SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRK
INPhiseqgaiiFebDRAFT_10023348413300000364SoilMREPSDGMVVYDSVSKFFPVREQSGRSDPSHLMVALDRISARVGAGELITLLGPSGCG
INPhiseqgaiiFebDRAFT_10192307433300000364SoilMTNAPAASMVVYDGVSKFFPVRVRSVRNDRPELMVALDRINATVRKGELVTLL
AF_2010_repII_A100DRAFT_100660943300000655Forest SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITLLGPSGAARPPCCGSPPG*
JGI1027J12803_10929293673300000955SoilMTNPPPASDGMVVYDNVSKFFPVRIRPGQKDRPELMVALDRINATVRKGELI
Ga0066395_1027179113300004633Tropical Forest SoilMTQPPASDGMVVYDGVSKFFPVRVRPGLKDRPELMVALDRINATVR
Ga0062594_10144741023300005093SoilMKTPPASSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELI
Ga0070690_10153431613300005330Switchgrass RhizosphereMTDRMVIYDNVSKFFPVRVRPGQKDRPELMVALDRVNATVRRGELI
Ga0066388_10035817513300005332Tropical Forest SoilMTNAPAADMVVYDGVSKFFPVRVRSVRNDRPELMVALDRINATVRKGEFVTLLGPS
Ga0066388_10358402613300005332Tropical Forest SoilMKPPAASDGMVVYDGVSKFFPVRSRPGREDSAELMVALDRINATVRKGELIT
Ga0066388_10765306523300005332Tropical Forest SoilMTKVPPASDGMVVYESVSKFFPVRVRPGQKDRPELMVALDRVEASVRKGELITLL
Ga0070689_10055916823300005340Switchgrass RhizosphereMKTPPASSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGE
Ga0070661_10108200223300005344Corn RhizosphereMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGEL
Ga0070700_10036872823300005441Corn, Switchgrass And Miscanthus RhizosphereMAEPAPSAAASDAMVVYEDVSKFFPVRVRPGQKDRPELMVALDRVNATVRKGELVTLLGPSGC
Ga0070694_10025452223300005444Corn, Switchgrass And Miscanthus RhizosphereMKTRPTSSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATV
Ga0070678_10072450523300005456Miscanthus RhizosphereMKTPPASSDGMVVYDDLSKFFPVRIRPGQKERPEFMVALDRVNATVRKG
Ga0066700_1101328623300005559SoilMTNPPAASMVVYDGVSKFFPVRGRPGLKDRPDLMVALDRINATVRQGPQSAGSAA*
Ga0068855_10130649523300005563Corn RhizosphereMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVTATVRKGELITLLGP
Ga0066706_1126405013300005598SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINASVRKG
Ga0066903_10450709913300005764Tropical Forest SoilMVVYEGVSKFFPVRMRLGQSEQPDLMVALDRVTATIR
Ga0066903_10917500513300005764Tropical Forest SoilMAPSSEQAPVTSDGMVVYDGVSKFFPVRVARTRRDRPELMVALDRIDAAVRKGELVTLL
Ga0066656_1046632933300006034SoilMVVYDGVSKFFPVRGRPGLKDRPDLMVALDRINATVRQGPQSAGSAA*
Ga0066656_1068291923300006034SoilMAHAPPASDGMVIYDGVSKFFPVRVAAGDAAQPELMVALDRINASVRKGELITLLGPSGCGK
Ga0075417_1044587113300006049Populus RhizosphereMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELITLLGPSGCG
Ga0070715_1016089323300006163Corn, Switchgrass And Miscanthus RhizosphereMTNAPAASMVVYDGVSKFFPVRVRSVRNDRPELMVALDRINATVRKGELVTLLG
Ga0066653_1052230623300006791SoilMTNAPAASMVVYDGVSKFFPVRLRSVGSDQPELMVALARINATVR
Ga0066658_1067895213300006794SoilRNSVEMTNPPAASMVVYDGVSKFFPVRGRPGLKDRPDLMVALDRINATVRQGPQSAGSAA
Ga0075426_1019240713300006903Populus RhizosphereMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITL
Ga0075435_10194376523300007076Populus RhizosphereMTATVSMPSATDGMVVYENVSKFFPVRVRPGQRDRPDLMVALDRVDASVNKGELITLL
Ga0099795_1045812223300007788Vadose Zone SoilMTKPPAATDGMVVYEDVSKFFPVRIRPGQKERPELMVALDRVNATVRKGELI
Ga0105679_1097199213300007790SoilMAATPNTATPSTSLETMVVYRDVSKFFAVRTRPDQKDRPELMVALDRVNATISKGELITLLGSSGCG
Ga0099830_1095223113300009088Vadose Zone SoilMVVYENVSKFFPVRLRPGQKDRPELMVALDRVNATVRK
Ga0105250_1025577823300009092Switchgrass RhizosphereMKTRPTSSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELITLLGPSGCGK
Ga0075418_1099528513300009100Populus RhizosphereMTNPPAASMVVYDGVSKFFPVRARPGLTDRPDLMVALDRVNATVRQGELITLLGPSGCG
Ga0105247_1126518113300009101Switchgrass RhizosphereMVLHRVRDTRPAMTDRMVIYDNVSKFFPVRVRPGQKDRPELMVALDRVNATVRRGELIT
Ga0066709_10003004373300009137Grasslands SoilMTNPPAASMVVYYGVSTFFPVRGRPGLKDRPDLMVALGRINATVRQGPQSAGSAA*
Ga0099792_1000178883300009143Vadose Zone SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITLLGPS
Ga0114129_1060745333300009147Populus RhizosphereMVVYDGVSKFFPVRARPGLTDRPDLMVALDRINATVRQGELI
Ga0075423_1276374813300009162Populus RhizosphereMKTRPTSSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGEL
Ga0126374_1030592813300009792Tropical Forest SoilMVVYERVSKFFATRAQSGRKHRPELMVALDRVNATIRKGEFITL
Ga0126382_1179911423300010047Tropical Forest SoilMTKAPAASDGMVVYEGVSKFFPVRVRPGAKDRPELMVALDRINATVRKGELITLLGPSGC
Ga0126370_1068158123300010358Tropical Forest SoilMKPPAAPDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITLLG
Ga0126370_1161220333300010358Tropical Forest SoilMTNAPAASMVVYDGVSKFFPVRLRSVGSDQPELMVALDRVNATVRKGELVTLLGP
Ga0126372_1295115523300010360Tropical Forest SoilMTKAPASDGMVVYEGVSKFFPVRVRPGAKDRPELMVALDRINATVRKGEL
Ga0126379_1279474013300010366Tropical Forest SoilMVAYEDVSKFFPVRIRPGRKDRPELMVALDRISATVRKGELVTL
Ga0126381_10121788213300010376Tropical Forest SoilMTKAASDGMVVYEGVSKFFPVRVRPGAKDRPELMVALDRINATVRKGELITLLGPSGC
Ga0124850_112278323300010863Tropical Forest SoilMTPSPPASDGMVVYEGVSKFFPVRATAGPREQPELMVALDRINASVRRG
Ga0137374_1004486013300012204Vadose Zone SoilMADTIAPAAPDGMVVYEDVSKFFPVRIRPGQKDRPELMVALDRVNATVRKGELVT
Ga0137374_1044679823300012204Vadose Zone SoilMTNPPAAWMVVYDGVSKFFPVRARPGLTDRPDLMVALDRINATVR
Ga0137378_1168646913300012210Vadose Zone SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINASVRKGELITLLGPSGCG
Ga0137372_1011813533300012350Vadose Zone SoilMTQPPAASDGMVVYDGISKFFPVRARPGREDSAELMVALDRINAIVRKGGLITLLGPSGCGKT
Ga0137367_1079324223300012353Vadose Zone SoilMTQPPAASDGMVVYDGISKFFPVRARPGREESAELMVALDRINAIVRKGELITLLGPS
Ga0137373_1025416213300012532Vadose Zone SoilMTQPPAASDGMVVSDGISKFYPVRARPGREDSAELMVALDRINASVRKGE
Ga0126375_1198988913300012948Tropical Forest SoilMVVYEGVSKFFPARVRPGQKDRPELMVALDRVSATVRKGELVTL
Ga0164299_1048348323300012958SoilMKTPPASSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELIT
Ga0164301_1008060813300012960SoilMKTRPTSSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVTATVRKGELITLL
Ga0164302_1156474713300012961SoilMTNAPSASMVVYDCVSKFFPVRVRSVRNERPELMVARDRINAKVRKGELVTLL
Ga0164304_1065900313300012986SoilMKTPPASSDGMVVDDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELITLL
Ga0157372_1213490513300013307Corn RhizosphereMKTRPTSSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELIT
Ga0134075_1048554023300014154Grasslands SoilMAQARVPSDGMVVYQDVSKFFPVRVTPGQKDRPELMVALDRINASVRKGELVTLLGPSG*
Ga0181525_1009729933300014654BogMAAATPERMVVYEGVSKFFPVRSGGDKLMVALDRVNAAVNKGELITLLGPSGCGK
Ga0132257_10261377513300015373Arabidopsis RhizosphereMKTPPASSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELITLLGPSGC
Ga0132257_10460535113300015373Arabidopsis RhizosphereMNSAAPSATGNCMVVYDNVSKFFPVRGQSGSSERSQLMVALDRISASVRAGELVTLLGPS
Ga0132255_10075225043300015374Arabidopsis RhizosphereMKTRPTSSDGMVVYDDVSKFFPVRSRPGQKERPEFMVALDRVTATVRKG
Ga0132255_10310412923300015374Arabidopsis RhizosphereMKTRPTSSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELITLLGPSGC
Ga0184621_1030280713300018054Groundwater SedimentMQAMQASSDGMVVYDDVSKFFPVRIRPGQKARPEFMVALDRVNATVRKGELITLL
Ga0187772_1118316323300018085Tropical PeatlandMSRDDANPPPRVAAAPPMVEYDGVSKFFAVREQAGGARDPELMVALDRVSATIRKGELVTLLGPS
Ga0187772_1133412113300018085Tropical PeatlandMTEMATTAPAPTETPDAMVVYRDVSKFFPVRVSPGEKNRSSLMVALDRVNATIRR
Ga0126371_1035523633300021560Tropical Forest SoilMSSVTEAMVVYEQVSKFFPMRAQSGWKHRPELMVALDRVSATIQKGEFITLLGPSGCG
Ga0207654_1046034123300025911Corn RhizosphereMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELITL
Ga0207668_1127850713300025972Switchgrass RhizosphereMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATV
Ga0207675_10066720313300026118Switchgrass RhizosphereMVVYEDVSKFFPVRVRPGQKDRPELMVALDRVNATVRKGELV
Ga0209239_101632453300026310Grasslands SoilRRYSVEMTNPPAASMVVYDGVSKFFPVRGRPGLKDRPDLMVALDRINATVRQGPQSAGSA
Ga0209160_132970123300026532SoilMVVYDGVSKFFPVRGRPGLKDRPDLMVALDRINATVRQGPQSAGSAA
Ga0208404_100597413300026855SoilMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVTATVRKGELITLL
Ga0307291_105709613300028707SoilMQGMQTSFDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKG
Ga0307298_1005708633300028717SoilMQASSDGMVVYDDVSKFFPVRIRPGQKERPELMVALDRVNATVRKGEL
Ga0307307_1000443853300028718SoilMQAMQASSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELIT
Ga0307323_1007827613300028787SoilMQGTQASSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGELITL
Ga0307296_1040606523300028819SoilMQAMQASSDGMVVYDDVSKFFPVRIRPGQKERPELMVALDRVNATVRKG
Ga0307296_1046312923300028819SoilMKARPTSSDGMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNATVRKGE
Ga0170824_11109884823300031231Forest SoilVTASTAADRMVAYEGVSKFFPVRVRLGSEEQPELMVALDRVDASVRKD
Ga0318573_10013626103300031564SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITLLGPSG
Ga0318555_1023950013300031640SoilMTPSPPASDGMVVYEGVSKFFPVRATAGPREQPELMVALDRINASVRRGELVT
Ga0318560_1058535213300031682SoilMKPPAASDGMVVYDGVSKFFPVRARPGHQERAELMVALDRINATVRKGELITLLGPSGCG
Ga0318493_1001131813300031723SoilMKPPAASDGMVVYDGVSKFFPVRARPGHQERAELMVALDRINATVRKGELIT
Ga0318526_1004990613300031769SoilMTQAPAAPDGMVVYDGVSKFFPVRVRPGWTDRPELMVALDRINATVRKGEL
Ga0318547_1005491413300031781SoilMKPPAASDGMVVYDGVSKFFPVRARPGHQERAELMVALDRINATVRKGELI
Ga0318547_1029110723300031781SoilMTQPPAASDGMVVYDGVSKFFPVRVRPGRKERSELMVALDCINASVRKGELITLLG
Ga0318499_1003944223300031832SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITLLGPSGCG
Ga0318511_1016082423300031845SoilMKPPAASDGMVAYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITLLGP
Ga0306919_1061700413300031879SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITLL
Ga0310912_1074357513300031941SoilMPSSTEAMVVYEDVSKFFPMRAQSGRKHRPELMVALDRVNA
Ga0318530_1030586523300031959SoilMTPSPPASDGMVVYEGVSKFFPVRATAGPREQPELMVALDRINASVRRGELVTPL
Ga0318504_1014652713300032063SoilMKPPAASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVRKGELITLLGP
Ga0318553_1057264423300032068SoilMTQPPAASDGMVVYDGVSKFFPVRVRPGRKERSELMVALDCINASVRKGELITLLGPSGCGK
Ga0306920_10073958823300032261SoilMKPPAASDGMVVYDGVSKFFPVRARPGHQERAELMVALDRINATVRKGE
Ga0306920_10210898713300032261SoilMKPPVASDGMVVYDGVSKFFPVRARPGREDSAELMVALDRINATVR
Ga0310812_1048044123300032421SoilMVVYDDVSKFFPVRIRPGQKERPEFMVALDRVNAT
Ga0335081_1038350813300032892SoilMADDTPECMVVYEGVSKFFPIRSESKKHAPPVLMVALDRISASVRKGELVTLLGPSG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.