Basic Information | |
---|---|
Taxon OID | 2010170001 Open in IMG/M |
Scaffold ID | BISONR_BXAS39919_y2 Open in IMG/M |
Source Dataset Name | 3_050719R |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 843 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Bison Spring, Yellowstone National Park, Usa, Analyzing Thermal Gradients |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Bison Pool / Rosette Geyser, Yellowstone National Park | |||||||
Coordinates | Lat. (o) | 44.6 | Long. (o) | -110.9 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F024968 | Metagenome / Metatranscriptome | 203 | Y |
F031015 | Metagenome / Metatranscriptome | 183 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
BISONR_439390 | F024968 | GGGGG | MQPKVCLVLFSFGTFNRAWTQILRNLGIDYTLCIATSGGTGANIQTPQGVFAAGSPGLRGYFRQFDAVILCDSTNNLAATSLINYSVFWMRWNDPEDPAFLFFNPHFSTAITESAYNSNFPSDFPIVRPSPSDIAGTLYAADGGSASSISLLGVGATSGRGACVLFLAENIRAHVMTICNTHTNNIPYYWKLDTAKHSVLASTTYTHRVARNGKAGEILAVPAPPISSEDTETYPADCVV |
BISONR_439400 | F031015 | N/A | WGRIEIPSTGDGYYDQYRIEVQRTAGSSNYNLLSKIVGVR |
⦗Top⦘ |