Scaffold YNP2_FKNZE9C02QO1AW

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold YNP2_FKNZE9C02QO1AW

Scaffold YNP2_FKNZE9C02QO1AW

Overview

Basic Information
Taxon OID	2015219001 Open in IMG/M
Scaffold ID	YNP2_FKNZE9C02QO1AW Open in IMG/M
Source Dataset Name	Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP2 Nymph Lake 10
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	517
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Source Dataset Sampling Location
Location Name	Yellowstone National Park, WY
Coordinates	Lat. (^o)	44.7523206	Long. (^o)	-110.7253926	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F075084	Metagenome / Metatranscriptome	119	N

Sequences

Protein ID	Family	RBS	Sequence
YNP259250	F075084	GAG	MRPCQKDICLLYSLGADYAKLMDFTRENPAGKLFEAGARAMSYASGLMRLWYGYDTGALLERSLRRILRRSITYCNIMRRLGLESEYCRRFTIYNGVTCDLVSVFTVETAYADILHMITN

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