Scaffold FNTS010_GJ857YP01EP76I

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold FNTS010_GJ857YP01EP76I

Scaffold FNTS010_GJ857YP01EP76I

Overview

Basic Information
Taxon OID	2119805011 Open in IMG/M
Scaffold ID	FNTS010_GJ857YP01EP76I Open in IMG/M
Source Dataset Name	Soil microbial communities from sample at Multiple FACE and OTC sites
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	536
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Terrestrial → Soil → Sand → Desert → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location
Location Name	USA: Sugar bunker, Nevada
Coordinates	Lat. (^o)	36.766667	Long. (^o)	-115.95	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F069695	Metagenome	123	Y

Sequences

Protein ID	Family	RBS	Sequence
FNTS010_06219550	F069695	N/A	VVQIVLLAATVGAFAFMLSSLWATLRLTFVGVPESAPEETQAEERTDDARP

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