Basic Information | |
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Taxon OID | 2166559018 Open in IMG/M |
Scaffold ID | JCVI_READ_1150552 Open in IMG/M |
Source Dataset Name | Marine microbial communities from the Atlantic Ocean, for comparison studies - Ocean6 (GOS4441574) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | 454 Life Sciences |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 983 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Environmental And Host-Associated → Microbial Communities From The Atlantic Ocean And Human Feces From France, Grouped Together For A Comparative Study |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | Location on Map | |||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F007774 | Metagenome / Metatranscriptome | 345 | Y |
Protein ID | Family | RBS | Sequence |
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Ocean6-_02679320 | F007774 | GAG | MSKKDKLTPEQEKELIMLAAEIEAEAIKMKIDYENNPSEESGSVVFVNERSSLLEDEDEELGHQALVSSTQILKKELEKQKKNGDKK |
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