Basic Information | |
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Taxon OID | 2170459019 Open in IMG/M |
Scaffold ID | G14TP7Y01DOJKI Open in IMG/M |
Source Dataset Name | Litter degradation MG4 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Illinois, Urbana-Champaign |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 591 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter → Switchgrass, Maize And Mischanthus Litter Microbial Communities From University Of Illinois Energy Farm, Urbana, Il |
Source Dataset Sampling Location | ||||||||
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Location Name | University of Illinois Energy Farm | |||||||
Coordinates | Lat. (o) | 40.1097 | Long. (o) | -88.2041 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F003039 | Metagenome / Metatranscriptome | 511 | Y |
Protein ID | Family | RBS | Sequence |
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4MG_03572670 | F003039 | GAG | MKNTEFRYVTRGRAAALLGISVKELSRISSESGLGHLERAGEQEEVYFTYEELRQICQLAIRIH |
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