Basic Information | |
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Taxon OID | 2170459019 Open in IMG/M |
Scaffold ID | G14TP7Y01EN6I3 Open in IMG/M |
Source Dataset Name | Litter degradation MG4 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Illinois, Urbana-Champaign |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 648 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter → Switchgrass, Maize And Mischanthus Litter Microbial Communities From University Of Illinois Energy Farm, Urbana, Il |
Source Dataset Sampling Location | ||||||||
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Location Name | University of Illinois Energy Farm | |||||||
Coordinates | Lat. (o) | 40.1097 | Long. (o) | -88.2041 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F045595 | Metagenome / Metatranscriptome | 152 | Y |
Protein ID | Family | RBS | Sequence |
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4MG_03997620 | F045595 | AGG | TRRSGAVHTVNYAGVPAPTTVGASSGQR*AREPDHGGSVTAANAGGSFDGAIRANISPDSQGFANSIDNAFRGRSDNGPVTFSGNESGNKAYAGYLRGGTGNSGTQAGLVPGEYVFYIYTGSVGDVYNVKDGTVARNAFIADEKGFLGWFSCGVSTDQGSGPG*SAVADYGNRKGLARMGEP |
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