Basic Information | |
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Taxon OID | 2199352025 Open in IMG/M |
Scaffold ID | deepsgr__Contig_123488 Open in IMG/M |
Source Dataset Name | Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Argonne National Laboratory |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 732 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Rothamsted, Uk, For Project Deep Soil |
Source Dataset Sampling Location | ||||||||
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Location Name | United Kingdom Rothamsted | |||||||
Coordinates | Lat. (o) | 56.03 | Long. (o) | -2.82 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F083187 | Metagenome / Metatranscriptome | 113 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
deepsgr_01974280 | F083187 | N/A | MKTLARHVAAGLEERTYCVVFEDDLERCWPSSRMAQAERTREIEEFTESQGWAAAILDAGFGTRAILRKLEPGIDAALI |
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