Basic Information | |
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Taxon OID | 2236876008 Open in IMG/M |
Scaffold ID | none_p430421 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-3LG-Deep1200 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of South Carolina |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 521 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine → Marine And Estuarine Microbial Communities From Columbia River Coastal Margin |
Source Dataset Sampling Location | ||||||||
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Location Name | Cape Meares | |||||||
Coordinates | Lat. (o) | 45.483 | Long. (o) | -124.918 | Alt. (m) | Depth (m) | 1200 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F080146 | Metagenome | 115 | Y |
Protein ID | Family | RBS | Sequence |
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none_4304212 | F080146 | AGGA | MGVVGAAIKGFGKALKAGKKAKLKTVYRVKPSVDISRFKKSKKHGLAKKLDVWANRETGKILSQAGTGVNIKYTKAGKPFVTKGTKSSILTKAKGLTKLVAPVAAAATAG |
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