Basic Information | |
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Taxon OID | 3300000156 Open in IMG/M |
Scaffold ID | NODE_c0727837 Open in IMG/M |
Source Dataset Name | Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Ambry Genetics |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 7184 |
Total Scaffold Genes | 13 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 8 (61.54%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor → Sugar Cane Bagasse Incubating Bioreactor Microbial Communities From Sao Carlos, Brazil, That Are Aerobic And Semianaerobic |
Source Dataset Sampling Location | ||||||||
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Location Name | Sao Carlos, Brazil | |||||||
Coordinates | Lat. (o) | -22.080556 | Long. (o) | -48.997778 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F012825 | Metagenome / Metatranscriptome | 277 | Y |
Protein ID | Family | RBS | Sequence |
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NODE_07278377 | F012825 | N/A | MSPHRRILVMALSTGIIAALAASXXXXXXXXXXXXXXXXXQWMRYLLVVLIGVVAALFWQLNEIREEAERRVIRAMSHHLNNSLNIVMNRRHLPQEAREQIVDEQVLRCVWAIQTILPSLNIGLP |
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