Basic Information | |
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Taxon OID | 3300000198 Open in IMG/M |
Scaffold ID | LP_F_10_S103_200DRAFT_c1008922 Open in IMG/M |
Source Dataset Name | Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_200 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2372 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Line P, North Pacific Ocean | |||||||
Coordinates | Lat. (o) | 48.35 | Long. (o) | -123.3 | Alt. (m) | Depth (m) | 200 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F023637 | Metagenome / Metatranscriptome | 209 | Y |
Protein ID | Family | RBS | Sequence |
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LP_F_10_S103_200DRAFT_10089223 | F023637 | N/A | TTLPYRSRKGRYFSQHHKRNDIVGNKFVHQKDTSINERRFIDEVKGGMINTDEDGLADLNYNIVKREYLFNTEHEIIDFRCEQDIPNHVEI* |
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