NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Scaffold EM232_1062743

Scaffold EM232_1062743


Overview

Basic Information
Taxon OID3300000282 Open in IMG/M
Scaffold IDEM232_1062743 Open in IMG/M
Source Dataset NameHuman fecal microbial communities from Cork, Ireland - EM232
Source Dataset CategoryMetagenome
Source Dataset Use PolicyOpen
Sequencing CenterBeijing Genomics Institute (BGI), Macrogen
Sequencing StatusPermanent Draft

Scaffold Components
Scaffold Length (bps)114075
Total Scaffold Genes179 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)44 (24.58%)
Novel Protein Genes9 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)4 (44.44%)
Associated Families9

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae(Source: IMG-VR)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From University College Cork, Ireland, Of The Elderly Irish Population

Source Dataset Sampling Location
Location NameCork, Ireland
CoordinatesLat. (o)51.907Long. (o)-8.472Alt. (m)Depth (m)
Location on Map
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Associated Families

Sequences


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