Basic Information | |
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Taxon OID | 3300000546 Open in IMG/M |
Scaffold ID | LJNas_1033102 Open in IMG/M |
Source Dataset Name | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Beijing Genomics Institute (BGI), Lifesequencing S.L. |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 557 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere → Quercus Rhizosphere Microbial Communities From Sierra Nevada National Park, Granada, Spain |
Source Dataset Sampling Location | ||||||||
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Location Name | Sierra Nevada National Park, Granada, Spain | |||||||
Coordinates | Lat. (o) | 36.96971 | Long. (o) | -3.46027 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F063887 | Metagenome / Metatranscriptome | 129 | Y |
Protein ID | Family | RBS | Sequence |
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LJNas_10331022 | F063887 | N/A | KQSIAIEIALQTQVLKTCPIHRQIYFDDDADAASAFALAIELVRKHKPYVEEFHDNEHELMDLLSDTLSATPLCCPECQSLGVLGSLPERRGFIESALESR* |
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