Basic Information | |
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Taxon OID | 3300000580 Open in IMG/M |
Scaffold ID | AF_2010_repII_A01DRAFT_1069694 Open in IMG/M |
Source Dataset Name | Forest soil microbial communities from Amazon forest - 2010 replicate II A01 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
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Scaffold Length (bps) | 534 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil → Forest Soil Microbial Communities From Amazon Forest, Brazil |
Source Dataset Sampling Location | ||||||||
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Location Name | Amazon forest, Fazenda Nova Vida, City of Ariquemes, State of Rondonia, Brazil | |||||||
Coordinates | Lat. (o) | -10.171667 | Long. (o) | -62.7875 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F018834 | Metagenome | 233 | Y |
Protein ID | Family | RBS | Sequence |
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AF_2010_repII_A01DRAFT_10696942 | F018834 | N/A | LLRFSAQMKHVSYLGYVITATANNEKSMWRSHVIISWHAGKFALHDEVCFTTEMEAEDHAVELGKHWVNNRLQAMQRDPES* |
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