Basic Information | |
---|---|
Taxon OID | 3300001431 Open in IMG/M |
Scaffold ID | F14TB_100101480 Open in IMG/M |
Source Dataset Name | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 4018 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (80.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Soil → Loam → Grasslands → Soil → Soil Microbial Communities From Kansas Great Prairie, Usa, Amended With Brdu |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Kanza Prairie, Kansas, USA | |||||||
Coordinates | Lat. (o) | 39.100992 | Long. (o) | -96.608258 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F080642 | Metagenome / Metatranscriptome | 115 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
F14TB_1001014803 | F080642 | GAGG | MKKSCYLAVLLAWVLWTRTQGPTADSWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPVKRPGGAGEQQQQEAPPSK* |
⦗Top⦘ |