Scaffold Draft

Basic Information
Taxon OID	3300001605 Open in IMG/M
Scaffold ID	Draft_10001230 Open in IMG/M
Source Dataset Name	Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	McGill University
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300001605 Open in IMG/M

Scaffold ID

Draft_10001230 Open in IMG/M

Source Dataset Name

Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

McGill University

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	34759
Total Scaffold Genes	55 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	38 (69.09%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (40.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

34759

Total Scaffold Genes

55 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

38 (69.09%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

2 (40.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

(Source: UniRef50)

Source Dataset Ecosystem
Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Ecosystem

Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location
Location Name	Fort McMurray in northeastern Alberta, Canada
Coordinates	Lat. (^o)	57.01116	Long. (^o)	-111.6	Alt. (m)	Depth (m)	0 to .1
Location on Map

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Source Dataset Sampling Location

Location Name

Fort McMurray in northeastern Alberta, Canada

Coordinates

Lat. (^o)

57.01116

Long. (^o)

-111.6

Alt. (m)

Depth (m)

0 to .1

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000934	Metagenome / Metatranscriptome	828	Y
F002085	Metagenome / Metatranscriptome	595	Y
F011148	Metagenome / Metatranscriptome	294	Y
F012668	Metagenome / Metatranscriptome	278	Y
F049613	Metagenome / Metatranscriptome	146	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_1000123031	F011148	GGA	MAVFNKNTLSQVSGFDNPIIAGELVYNQQTYWNLKLTAEDGVSPVSLVDATINAQIIRRQLSNVQDTRYGLTFDISNYTPTPSPIPLTITNRVDADGEFTLVINDASWGLLTTDDQLAINSQDGAGFSGRIKISFPSQPSGQPAEDNIIFLLFLVRSDGIVKV*
Draft_1000123037	F002085	N/A	MNIIAPVDNTNNIRYADFVRVTTPSNTYLFTTAPAPITVPAVDANPFAGVGQLISVGQATRDIKSTANETSFSLVGIDTAMLGWVLGQEVKGAKIEAWHGFFDVNGALITTGGTGGLYKFFTGFVNSFAISEQWMEEVRMFVGVITVNASSIQLILKNRVAGRYTNNNSWQFFTPGDTSMNRVAFISTINYQFGKK*
Draft_1000123038	F000934	AGCAGG	MSLNQILAITESVGINDQRFVGQVLSRNQRISTSEILTVVPFQFTLTPMKYLYYSKNRSLLSNLRYFDKALTQYLNFGATGWVNYIAYQGSMTSTQIAACRWQTSSANKNLVLGSLPSIASSSYIVRAGDFCQVGLYTYIATADVQRGLGATVNIPVHRNLLTTVASPTVAVIGQYGTTISMGGSSYTGVTFPVILREYPTYTLMPITDDSFIAWDGNFVAFEAVTT*
Draft_1000123046	F012668	N/A	MTIKRYENVKVKTVATTVSSLGEQTTGVTLWFESRALVSDVANQLRISERYRVYADLVNFMFNYTPNMKTIVDNQDQYSFEWRGKNWRITDCRETNDRQYVSFVCYRNDPVVPV*
Draft_1000123052	F049613	N/A	MTVNEGREYLNMAKIEGGDVIKIEPTQFEPVPGSSPQDTGGGGGNQTQKANIGKT*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Draft_10001230

Overview

Ecosystem & Geography

Associated Families

Sequences