Basic Information | |
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Taxon OID | 3300001678 Open in IMG/M |
Scaffold ID | Mariner_1034294 Open in IMG/M |
Source Dataset Name | Black smokers hydrothermal plume microbial communities from Mariner, Lau Basin, Pacific Ocean -IDBA |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1424 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (80.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Mariner, Lau Basin, Pacific Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Mariner, Lau Basin, Pacific Ocean | |||||||
Coordinates | Lat. (o) | -20.180059 | Long. (o) | -176.601242 | Alt. (m) | Depth (m) | 1900 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F096262 | Metagenome | 105 | N |
Protein ID | Family | RBS | Sequence |
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Mariner_10342945 | F096262 | N/A | QISSISMGVSSVGTGADFCSGFKLTGTALQEGDATFMGPAIAQAASGGTGVANCVTQEKTALGVTSGNTLDIQVAVTTAATIDASCTIQFE* |
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