Basic Information | |
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Taxon OID | 3300001727 Open in IMG/M |
Scaffold ID | JGI24529J20061_100610 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Pacific Ocean - LP-55 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1627 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (60.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Pacific Ocean | |||||||
Coordinates | Lat. (o) | 49.567 | Long. (o) | -138.6676 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F010426 | Metagenome / Metatranscriptome | 304 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
JGI24529J20061_1006102 | F010426 | AGGAG | MEKWKELSAGKKRFWVAVGILVIIAVFGWVTGWWSSPPVV* |
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