Basic Information | |
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Taxon OID | 3300001938 Open in IMG/M |
Scaffold ID | GOS2221_1017802 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | J. Craig Venter Institute (JCVI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1470 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (40.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Global Ocean Sampling (Gos) |
Source Dataset Sampling Location | ||||||||
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Location Name | Bedford Basin, Nova Scotia, Canada | |||||||
Coordinates | Lat. (o) | 44.690277 | Long. (o) | -63.637222 | Alt. (m) | Depth (m) | 1 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F061906 | Metagenome / Metatranscriptome | 131 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
GOS2221_10178023 | F061906 | GAGG | LRHSNKEDNMQILVLDTFDNWGHMVSKVDKGVLATALKDAEDNLTPKQPKEVIIYQTPEDDLE* |
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