Basic Information | |
---|---|
Taxon OID | 3300001954 Open in IMG/M |
Scaffold ID | GOS2235_1016731 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Colon, Panama - GS019 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | J. Craig Venter Institute (JCVI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 1713 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique | (Source: IMG/M) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Global Ocean Sampling (Gos) |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Colon, Panama | |||||||
Coordinates | Lat. (o) | 10.716389 | Long. (o) | -80.25445 | Alt. (m) | Depth (m) | 1.7 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F026395 | Metagenome / Metatranscriptome | 198 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
GOS2235_10167314 | F026395 | N/A | MTINEFRNNHYGRGGSTPPPPFTTYGGELDSTGDKGYL |
⦗Top⦘ |