Basic Information | |
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Taxon OID | 3300001954 Open in IMG/M |
Scaffold ID | GOS2235_1045437 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Colon, Panama - GS019 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | J. Craig Venter Institute (JCVI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1322 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Global Ocean Sampling (Gos) |
Source Dataset Sampling Location | ||||||||
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Location Name | Colon, Panama | |||||||
Coordinates | Lat. (o) | 10.716389 | Long. (o) | -80.25445 | Alt. (m) | Depth (m) | 1.7 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F092182 | Metagenome / Metatranscriptome | 107 | Y |
Protein ID | Family | RBS | Sequence |
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GOS2235_10454372 | F092182 | AGGA | VSENSQLNKTYALLKEVYGPLENLSQTQWLQIERGVKALMKEYGPDIPLESLKAMKHTYDNYHTEKDVALGFMSTEQ* |
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