Basic Information | |
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Taxon OID | 3300002068 Open in IMG/M |
Scaffold ID | JGIcombinedJ21913_10196932 Open in IMG/M |
Source Dataset Name | Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 682 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil → Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Barrow Environmental Observatory site, Barrow, Alaska, USA | |||||||
Coordinates | Lat. (o) | 71.2905 | Long. (o) | -156.788708 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F104688 | Metagenome / Metatranscriptome | 100 | Y |
Protein ID | Family | RBS | Sequence |
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JGIcombinedJ21913_101969321 | F104688 | N/A | LRMTFSNTSFKGTTPKELDAFYVVGPQTDAPQGAPPNTFPHDHVVRDVPAQNHGNYSVHLQGFFVLCSGQGIVGRACVPSWTSVGGPDPLPFATTVNGRPLTSADAIESAAAAGLVALINLGPAAVIVGSISGN* |
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