NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Scaffold M2t6FKB1_1536802

Scaffold M2t6FKB1_1536802


Overview

Basic Information
Taxon OID3300002136 Open in IMG/M
Scaffold IDM2t6FKB1_1536802 Open in IMG/M
Source Dataset NameM2t6FKB1 (104f)
Source Dataset CategoryMetagenome
Source Dataset Use PolicyOpen
Sequencing Center
Sequencing StatusPermanent Draft

Scaffold Components
Scaffold Length (bps)768
Total Scaffold Genes2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)1 (50.00%)
Novel Protein Genes1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)1 (100.00%)
Associated Families1

Taxonomy
Not Available(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location
Location NameBaltic Sea
CoordinatesLat. (o)57.305Long. (o)20.0745Alt. (m)Depth (m)1
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F013961Metagenome / Metatranscriptome267Y

Sequences

Protein IDFamilyRBSSequence
M2t6FKB1_15368022F013961GGAGGMDIATILTKRYPGSEWTLNGDNYSGLTWLSDTPKPTLAEIEGHWEDVQLEIATEAQSKIDAKASAISKL
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