Basic Information | |
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Taxon OID | 3300002179 Open in IMG/M |
Scaffold ID | JGI24141J26756_1128995 Open in IMG/M |
Source Dataset Name | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 510 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. BMG111209 | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil → Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Barrow, Alaska, USA | |||||||
Coordinates | Lat. (o) | 71.270939 | Long. (o) | -156.810374 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F067243 | Metagenome | 126 | N |
Protein ID | Family | RBS | Sequence |
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JGI24141J26756_11289951 | F067243 | N/A | STGQYRRPAMTDAGTDSPQEQAWSGPMRATAEQSLRYTLPTSGLVLTLVDPHGSGLWRLSRPTDGLELLTLAGAGPELLRCGYIIDRRGVETAVALGHRQDGHLPEEVRFTTRGIRWRQELTVDPVLVVGDLWVAEAIGTFDVVSVEDRDSAQTTGLDGQFRHVF* |
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