Basic Information | |
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Taxon OID | 3300002231 Open in IMG/M |
Scaffold ID | KVRMV2_101389290 Open in IMG/M |
Source Dataset Name | Marine sediment microbial communities from Santorini caldera mats, Greece - red mat |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 902 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment → Marine Sediment Microbial Communities From The Hellenic Volcanic Arc |
Source Dataset Sampling Location | ||||||||
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Location Name | Santorini caldera, Greece | |||||||
Coordinates | Lat. (o) | 36.5 | Long. (o) | 25.45 | Alt. (m) | Depth (m) | 336 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F065855 | Metagenome / Metatranscriptome | 127 | N |
Protein ID | Family | RBS | Sequence |
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KVRMV2_1013892902 | F065855 | N/A | TFVAATDRSTNDPTVDIGIASLNIEGSGVGGKLNRVGMHQLTYAKFTSNTFLRGVASNGPRDYSYEPGTSELSGIPGVGLVLDNSIQQGEVYAVDTELEPTCALFQGPQRVGSQHDEETGDDKYFVIDYHLAAIIQSETGRQITGCTTPLAW* |
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