Basic Information | |
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Taxon OID | 3300002301 Open in IMG/M |
Scaffold ID | JGI24891J29808_1002306 Open in IMG/M |
Source Dataset Name | Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2815 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (57.14%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic → Lentic Enriched Actinobacterial Communities From Dystrophic Bog Grosse Fuchskuhle, Brandenburg, Germany |
Source Dataset Sampling Location | ||||||||
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Location Name | Brandenburg, Germany | |||||||
Coordinates | Lat. (o) | 53.1666 | Long. (o) | 13.0333 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F070330 | Metagenome / Metatranscriptome | 123 | Y |
Protein ID | Family | RBS | Sequence |
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JGI24891J29808_10023062 | F070330 | AGG | MATHPQTWIKVNAPVDTGVAEIVSILNTVDGLETLQSCQGEPGDQEGYVYFALGNWKMLSEFVFERIGPVIKGRLDEDVRLMVEATNANEPMAKLSFRAEAADVVVSALKEVLR* |
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