Basic Information | |
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Taxon OID | 3300002341 Open in IMG/M |
Scaffold ID | JGI24213J29975_1001841 Open in IMG/M |
Source Dataset Name | Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI - D_52min_Anaerobic (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1504 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Wastewater Treatment → Wastewater Treatment Type I Accumulibacter Community From Ebpr Bioreactor In Madison, Wi, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Madison, WI, USA | |||||||
Coordinates | Lat. (o) | 43.078418 | Long. (o) | -89.386482 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F066418 | Metagenome / Metatranscriptome | 126 | Y |
Protein ID | Family | RBS | Sequence |
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JGI24213J29975_10018412 | F066418 | N/A | MDLKVCPDGTPAPIPAGECCPSLKACASLIVSSRSGLLGSLGSNANLLQTLTSATHGTDLGTVLSILNLLNNIQQFTNDVHQIPVLINQTLAGLVSGAGQAGQIVVDQLIGSITNQQNNGRDLLGSLGQNVNLLSSIGHLLPQGTSIATVISILNLLNNINALSNDIHQIPVLLNQTLSTLVGGAGEAGQVIVNQLLGLVGVQTQGRDLLGSLGQNVNLLSSIGHLLPQGTSIATVISILNLLNNINALSNDIHQIPVLLNQTLSTLVGGAGEAGQVIVNQLLGLVGVQTQGRDLLGSLGQNVNLLSSIGHLLPQGTSITTVISLLNLLNNVNALNNDLHQIPVVLQETLSNLLNGVQNLLPPTLQPVQGA* |
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