Basic Information | |
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Taxon OID | 3300003185 Open in IMG/M |
Scaffold ID | JGI26064J46334_1114423 Open in IMG/M |
Source Dataset Name | Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 515 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Affecting The Dissolved Organic Carbon Pool |
Source Dataset Sampling Location | ||||||||
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Location Name | South Atlantic Ocean | |||||||
Coordinates | Lat. (o) | -38.0018 | Long. (o) | -44.9985 | Alt. (m) | Depth (m) | 5 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F087331 | Metagenome | 110 | Y |
Protein ID | Family | RBS | Sequence |
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JGI26064J46334_11144231 | F087331 | GGAGG | MKQEQKWEYPEDNPYGECTYDGKVEVYYNMTSFLNDSEVQQIWSIVGKACDRNNIDTTGDQELSVRVYDEIELPDDEEE |
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