Basic Information | |
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Taxon OID | 3300003294 Open in IMG/M |
Scaffold ID | Ga0006245J48900_101465 Open in IMG/M |
Source Dataset Name | Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome C0912_C27A4_35 (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 671 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater → Marine Archaeal Communities From Monterey Bay, Ca, That Are Ammonia-Oxidizing |
Source Dataset Sampling Location | ||||||||
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Location Name | Monterey Bay, California, USA | |||||||
Coordinates | Lat. (o) | 35.7899 | Long. (o) | -122.3199 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F026014 | Metatranscriptome | 199 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0006245J48900_1014651 | F026014 | N/A | YAAAPVAVPAPYAGVPTAHGLGLPEAATFVAPPVRTVAEAPIVEQVVEPVEQWGYKVAY* |
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