Basic Information | |
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Taxon OID | 3300003537 Open in IMG/M |
Scaffold ID | FS903DNA_1074026 Open in IMG/M |
Source Dataset Name | Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS903_Marker113_DNA |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 952 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Axial seamount, northeast pacific ocean | |||||||
Coordinates | Lat. (o) | 45.92274 | Long. (o) | -129.988104 | Alt. (m) | Depth (m) | 1522 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F004843 | Metagenome | 421 | Y |
F015350 | Metagenome | 255 | Y |
Protein ID | Family | RBS | Sequence |
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FS903DNA_10740261 | F004843 | GAGG | MIKWILIIAIALSLSGCADTADAEDSAATTPAEQTQNRTADASGTTWIAIVMTWNPVKRVIDKEFSSEVNCWNYYDNGAGESKMLNNYGTQVLDHQGNKPDAEYMKKHRPQHRVYPTRMYKNFGGWMMWLTCDIKGRYEDL* |
FS903DNA_10740262 | F015350 | N/A | MAILVGWQYDDAFQKNLHEVEIRIKKFESVDLFNILEQISLAHIESVESVDILNKKQMEVQALEKEIKEKFDIQEREVRAQVKTIETKLQKLRSELHDGLTKIERNVSTIDSVVDEKFKTLWMMINNK* |
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