Basic Information | |
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Taxon OID | 3300003541 Open in IMG/M |
Scaffold ID | JGI20214J51650_10029889 Open in IMG/M |
Source Dataset Name | Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3561 |
Total Scaffold Genes | 10 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 7 (70.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland → Microbial Community Impact On Carbon Sequestration In Managed Wetland Carbon Farming |
Source Dataset Sampling Location | ||||||||
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Location Name | Sacramento, California, United States | |||||||
Coordinates | Lat. (o) | 38.1072 | Long. (o) | -121.6485 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F095701 | Metagenome | 105 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
JGI20214J51650_100298892 | F095701 | GAGG | MSAFDMFFNTWMTLAAILVFLKVKKLITWXWAIVLAPACVAVLVKGYLFFFNPX* |
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