Basic Information | |
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Taxon OID | 3300004016 Open in IMG/M |
Scaffold ID | Ga0058689_10053501 Open in IMG/M |
Source Dataset Name | Agave microbial communities from Guanajuato, Mexico - As.Ma.rz |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 755 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. SIO1D8 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave → Agave Microbial Communities From California, Usa, And Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Guanajuato, Mexico | |||||||
Coordinates | Lat. (o) | 21.0936 | Long. (o) | -100.2988 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F018515 | Metagenome | 234 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0058689_100535012 | F018515 | N/A | MGVLDVLKHTQQLFNSRKRQGRETDGAGIKLQVGGLHRNEAFDMGPQPDHTTPTELRMMRDGDKRESPSTQGVTGVEDSNGLIN* |
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