Basic Information | |
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Taxon OID | 3300004081 Open in IMG/M |
Scaffold ID | Ga0063454_100464141 Open in IMG/M |
Source Dataset Name | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 875 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Loam → Grasslands → Soil → Soil Microbial Communities From Mediterranean Grasslands, California |
Source Dataset Sampling Location | ||||||||
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Location Name | Hopland, California | |||||||
Coordinates | Lat. (o) | 38.99297339 | Long. (o) | -123.0674491 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F007656 | Metagenome / Metatranscriptome | 347 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0063454_1004641411 | F007656 | AGGAGG | MSLYRCRFFRLLDRTLDAFLIQGLACENDAEAIAMARRMSANSEADRFELWKDERCVHIEPQTT* |
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