Scaffold Ga0068305_10827624

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0068305_10827624

Scaffold Ga0068305_10827624

Overview

Basic Information
Taxon OID	3300005083 Open in IMG/M
Scaffold ID	Ga0068305_10827624 Open in IMG/M
Source Dataset Name	Mastotermes darwiniensis gut microbial communities from University of Queensland, Australia under feeding trial
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Queensland
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	779
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Mastotermes Darwiniensis Gut → Termite Gut Microbial Communities From Australia

Source Dataset Sampling Location
Location Name	University of Queensland, Australia
Coordinates	Lat. (^o)	-27.494746	Long. (^o)	153.011858	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F033480	Metagenome	177	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068305_108276241	F033480	GGA	LLEFFWLLFLNKNSLLEEFFTGINIPFNCEFLVAQPDGHVVILTEVYRVRPTLPLQTYRFGNWTPDGGLTWPSQGFYHRRNNLQGHTIRATRVNVSRILSVYVKVKVVPKQ*

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