Basic Information | |
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Taxon OID | 3300005791 Open in IMG/M |
Scaffold ID | Ga0079402_16012 Open in IMG/M |
Source Dataset Name | Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS907_Anemone_DNA |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Marine Biological Laboratory |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1000 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Axial seamount, northeast pacific ocean | |||||||
Coordinates | Lat. (o) | 45.933231 | Long. (o) | -130.013645 | Alt. (m) | Depth (m) | 1542 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F047906 | Metagenome / Metatranscriptome | 149 | N |
Protein ID | Family | RBS | Sequence |
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Ga0079402_160122 | F047906 | AGGGGG | VALAAKFTQKRTVTKERTPDAIRVPVAHGPVVGLGVLAVRWHHAVTKVRAALRLNMLVVAKRVSRVEIKFAVTAKAGLVQTQRL |
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