Basic Information | |
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Taxon OID | 3300005977 Open in IMG/M |
Scaffold ID | Ga0081474_122422 Open in IMG/M |
Source Dataset Name | Ferrous microbial mat communities from One Hundred Spring Plain, Yellowstone National Park, USA |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1316 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Ferrous Microbial Mat → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | One Hundred Spring Plain, Yellowstone National Park, Wyoming, USA | |||||||
Coordinates | Lat. (o) | 44.7330426 | Long. (o) | -110.7089928 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F056742 | Metagenome / Metatranscriptome | 137 | Y |
F077499 | Metagenome / Metatranscriptome | 117 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0081474_1224222 | F056742 | N/A | MTMKLADCRYKCKQTCFRKSIFVRMFKNEVEKTYGVKLKTCEDFCKFYVLFLSVAEMLYGKHYNYGIFKAIVRGKPNLYACVKCHQVFTAEESVTHTLQHMKQLGYNPLVYKEEI* |
Ga0081474_1224223 | F077499 | N/A | IGGHPDAGSPMDEKMRFLSTYMPLEFQKIQYMKAIDRALDILKYSLYSREDNVLFEIANKINGIYDVKELINKVKDVECTKDLKQVDVTLTEAKRYIYPDLSLSKYASAQAKQLNMRKYEYYARIFQCYINQDKDLDMLTLFRVSNTVYNYIRLNNLSNLVKKIQFKNDRIAQLMEKIKQRVKITLEAMSDRRPVEPDINVLNSITIRIKEIDLG* |
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